RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 PRH1P02810 166 aa8.07□□□□□ -1.12
USE1-203ENST00000593597 RAB11BQ15907 218 aa8.07□□□□□ -1.12
USE1-203ENST00000593597 C2orf76Q3KRA6 126 aa8.07□□□□□ -1.12
USE1-203ENST00000593597 C10orf55Q5SWW7 151 aa8.07□□□□□ -1.12
USE1-203ENST00000593597 HES5Q5TA89 166 aa8.07□□□□□ -1.12
USE1-203ENST00000593597 IDO2Q6ZQW0 420 aa8.07□□□□□ -1.12
USE1-203ENST00000593597 OR4A4PQ8NGN8 299 aa8.07□□□□□ -1.12
USE1-203ENST00000593597 UFD1Q92890 307 aa8.07□□□□□ -1.12
USE1-203ENST00000593597 FAM3DQ96BQ1 224 aa8.07□□□□□ -1.12
USE1-203ENST00000593597 FAM110AQ9BQ89 295 aa8.07□□□□□ -1.12
USE1-203ENST00000593597 SPATA25Q9BR10 227 aa8.07□□□□□ -1.12
USE1-203ENST00000593597 PLGRKTQ9HBL7 147 aa8.07□□□□□ -1.12
USE1-203ENST00000593597 SIGLEC8Q9NYZ4 499 aa8.07□□□□□ -1.12
USE1-203ENST00000593597 PEF1Q9UBV8 284 aaKnown RBP8.07□□□□□ -1.12
USE1-203ENST00000593597 NKX1-2Q9UD57 310 aaPredicted RBP8.07□□□□□ -1.12
USE1-203ENST00000593597 ZNF230Q9UIE0 474 aaPredicted RBP8.07□□□□□ -1.12
USE1-203ENST00000593597 ELF5Q9UKW6 265 aaPredicted RBP8.07□□□□□ -1.12
USE1-203ENST00000593597 MGAT4AQ9UM21 535 aa8.07□□□□□ -1.12
USE1-203ENST00000593597 A0A0B4J203 849 aa8.06□□□□□ -1.12
USE1-203ENST00000593597 A0A0G2JLM5 398 aa8.06□□□□□ -1.12
USE1-203ENST00000593597 MSGN1A6NI15 193 aa8.06□□□□□ -1.12
USE1-203ENST00000593597 CNIH1O95406 144 aa8.06□□□□□ -1.12
USE1-203ENST00000593597 CALRP27797 417 aaKnown RBP8.06□□□□□ -1.12
USE1-203ENST00000593597 DUTP33316 252 aaKnown RBP8.06□□□□□ -1.12
USE1-203ENST00000593597 LGALS7P47929 136 aa8.06□□□□□ -1.12
USE1-203ENST00000593597 OR10A3P58181 314 aa8.06□□□□□ -1.12
USE1-203ENST00000593597 PRSS8Q16651 343 aa8.06□□□□□ -1.12
USE1-203ENST00000593597 NRG4Q8WWG1 115 aa8.06□□□□□ -1.12
USE1-203ENST00000593597 SRSF12Q8WXF0 261 aaKnown RBP8.06□□□□□ -1.12
USE1-203ENST00000593597 HIPK2Q9H2X6 1198 aa8.06□□□□□ -1.12
USE1-203ENST00000593597 DUSP21Q9H596 190 aa8.06□□□□□ -1.12
USE1-203ENST00000593597 PLEKHA3Q9HB20 300 aa8.06□□□□□ -1.12
USE1-203ENST00000593597 AKIP1Q9NQ31 210 aa8.06□□□□□ -1.12
USE1-203ENST00000593597 COA4Q9NYJ1 87 aa8.06□□□□□ -1.12
USE1-203ENST00000593597 TRBV9A0A0B4J1U6 114 aa8.05□□□□□ -1.12
USE1-203ENST00000593597 A0A1B0GW64 132 aa8.05□□□□□ -1.12
USE1-203ENST00000593597 RBMY1BA6NDE4 496 aaKnown RBP8.05□□□□□ -1.12
USE1-203ENST00000593597 RBMY1EA6NEQ0 496 aaKnown RBP8.05□□□□□ -1.12
USE1-203ENST00000593597 ZNF785A8K8V0 405 aa8.05□□□□□ -1.12
USE1-203ENST00000593597 RAB27BO00194 218 aa8.05□□□□□ -1.12
USE1-203ENST00000593597 DENRO43583 198 aaKnown RBP8.05□□□□□ -1.12
USE1-203ENST00000593597 CD7P09564 240 aa8.05□□□□□ -1.12
USE1-203ENST00000593597 RBMY1DP0C7P1 496 aaKnown RBP8.05□□□□□ -1.12
USE1-203ENST00000593597 GNB3P16520 340 aa8.05□□□□□ -1.12
USE1-203ENST00000593597 CD40LGP29965 261 aa8.05□□□□□ -1.12
USE1-203ENST00000593597 MAP2K4P45985 399 aa8.05□□□□□ -1.12
USE1-203ENST00000593597 AQP4P55087 323 aa8.05□□□□□ -1.12
USE1-203ENST00000593597 UBE2KP61086 200 aa8.05□□□□□ -1.12
USE1-203ENST00000593597 SSX1Q16384 188 aa8.05□□□□□ -1.12
USE1-203ENST00000593597 NR2C2APQ86WQ0 139 aa8.05□□□□□ -1.12
USE1-203ENST00000593597 H1FOOQ8IZA3 346 aaPredicted RBP8.05□□□□□ -1.12
USE1-203ENST00000593597 OR56B1Q8NGI3 324 aa8.05□□□□□ -1.12
USE1-203ENST00000593597 KMT2AQ03164 3969 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 VPS13DQ5THJ4 4388 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 ANKRD65E5RJM6 399 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 E7EUB6 86 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 H0Y980 276 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 SHOXO15266 292 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 OR2A4O95047 310 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 CRYZL1O95825 349 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 IGLV2-14P01704 120 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 OR9G9P0C7N8 305 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 HSMCR30P0CW71 290 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 SAA1P0DJI8 122 aaPredicted RBP8.04□□□□□ -1.12
USE1-203ENST00000593597 AADACP22760 399 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 SERPINB10P48595 397 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 RPL30P62888 115 aaKnown RBP8.04□□□□□ -1.12
USE1-203ENST00000593597 RHOGP84095 191 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 TAGLNQ01995 201 aaKnown RBP8.04□□□□□ -1.12
USE1-203ENST00000593597 MLLT11Q13015 90 aaPredicted RBP8.04□□□□□ -1.12
USE1-203ENST00000593597 EXOSC2Q13868 293 aaKnown RBP8.04□□□□□ -1.12
USE1-203ENST00000593597 TNXAQ16473 311 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 RPEL1Q2QD12 228 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 CD300EQ496F6 205 aaPredicted RBP8.04□□□□□ -1.12
USE1-203ENST00000593597 LCN12Q6JVE5 192 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 Q8N402 240 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 DEFB125Q8N687 156 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 RAB3CQ96E17 227 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 TMEM68Q96MH6 324 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 ZNF430Q9H8G1 570 aaPredicted RBP8.04□□□□□ -1.12
USE1-203ENST00000593597 SELENOKQ9Y6D0 94 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 V9GY05 133 aa8.04□□□□□ -1.12
USE1-203ENST00000593597 HERC2O95714 4834 aa8.03□□□□□ -1.12
USE1-203ENST00000593597 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.03□□□□□ -1.12
USE1-203ENST00000593597 TEX22C9J3V5 150 aa8.03□□□□□ -1.12
USE1-203ENST00000593597 PPP5D1E7EU14 171 aa8.03□□□□□ -1.12
USE1-203ENST00000593597 ARL6IP5O75915 188 aa8.03□□□□□ -1.12
USE1-203ENST00000593597 DIRAS3O95661 229 aa8.03□□□□□ -1.12
USE1-203ENST00000593597 HLA-AP01891 365 aaKnown RBP8.03□□□□□ -1.12
USE1-203ENST00000593597 HIST1H1DP16402 221 aaKnown RBP8.03□□□□□ -1.12
USE1-203ENST00000593597 BRWD1-AS2P59051 145 aa8.03□□□□□ -1.12
USE1-203ENST00000593597 CD81P60033 236 aa8.03□□□□□ -1.12
USE1-203ENST00000593597 EIF4EBP1Q13541 118 aaPredicted RBP8.03□□□□□ -1.12
USE1-203ENST00000593597 TEX45Q8NA69 505 aa8.03□□□□□ -1.12
USE1-203ENST00000593597 OR10R2Q8NGX6 335 aa8.03□□□□□ -1.12
USE1-203ENST00000593597 OR10J5Q8NHC4 309 aa8.03□□□□□ -1.12
USE1-203ENST00000593597 USMG5Q96IX5 58 aa8.03□□□□□ -1.12
USE1-203ENST00000593597 PHB2Q99623 299 aa8.03□□□□□ -1.12
USE1-203ENST00000593597 ZC4H2Q9NQZ6 224 aa8.03□□□□□ -1.12
USE1-203ENST00000593597 RAB22AQ9UL26 194 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms