RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 FCN1O00602 326 aa8.75□□□□□ -1.01
SMAD4-211ENST00000590499 TUSC2O75896 110 aa8.75□□□□□ -1.01
SMAD4-211ENST00000590499 IGLV2-23P01705 113 aa8.75□□□□□ -1.01
SMAD4-211ENST00000590499 HLA-DQB1P01920 261 aa8.75□□□□□ -1.01
SMAD4-211ENST00000590499 APOA2P02652 100 aa8.75□□□□□ -1.01
SMAD4-211ENST00000590499 CTXN2P0C2S0 81 aa8.75□□□□□ -1.01
SMAD4-211ENST00000590499 OR5H8P0DN80 308 aa8.75□□□□□ -1.01
SMAD4-211ENST00000590499 EGR2P11161 476 aaPredicted RBP8.75□□□□□ -1.01
SMAD4-211ENST00000590499 VDAC1P21796 283 aa8.75□□□□□ -1.01
SMAD4-211ENST00000590499 PDLIM3Q53GG5 364 aaPredicted RBP8.75□□□□□ -1.01
SMAD4-211ENST00000590499 ZNF660Q6AZW8 331 aaPredicted RBP8.75□□□□□ -1.01
SMAD4-211ENST00000590499 HOGA1Q86XE5 327 aa8.75□□□□□ -1.01
SMAD4-211ENST00000590499 GVQW1Q8N7I0 195 aa8.75□□□□□ -1.01
SMAD4-211ENST00000590499 LINC00482Q8N8I6 264 aa8.75□□□□□ -1.01
SMAD4-211ENST00000590499 C20orf173Q96LM9 149 aa8.75□□□□□ -1.01
SMAD4-211ENST00000590499 PARP11Q9NR21 331 aa8.75□□□□□ -1.01
SMAD4-211ENST00000590499 SLC35D1Q9NTN3 355 aa8.75□□□□□ -1.01
SMAD4-211ENST00000590499 OR2W1Q9Y3N9 320 aa8.75□□□□□ -1.01
SMAD4-211ENST00000590499 TRAV41A0A0B4J266 112 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 IGKV1D-13A0A0B4J2D9 117 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 LINC00473A8K010 186 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 XRCC3O43542 346 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 GABARAPO95166 117 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 IGLV2-14P01704 120 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 CRYGBP07316 175 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 IGKV1-13P0DP09 117 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 PTHLHP12272 177 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 NFYAP23511 347 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-211ENST00000590499 DUTP33316 252 aaKnown RBP8.74□□□□□ -1.01
SMAD4-211ENST00000590499 CDX1P47902 265 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-211ENST00000590499 THBS3P49746 956 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 VBP1P61758 197 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 CX3CL1P78423 397 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 SSBP2P81877 361 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-211ENST00000590499 EIF4EBP1Q13541 118 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-211ENST00000590499 KIAA0141Q14154 515 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-211ENST00000590499 CTF1Q16619 201 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 TMEM177Q53S58 311 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 CXorf66Q5JRM2 361 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-211ENST00000590499 UBE2NLQ5JXB2 153 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 ANKRD13BQ86YJ7 626 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 ZNF695Q8IW36 515 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 MINDY2Q8NBR6 621 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 KLHL30-AS1Q8NEE0 82 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 BEST4Q8NFU0 473 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 SNAPC3Q92966 411 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 FLYWCH2Q96CP2 140 aaKnown RBP8.74□□□□□ -1.01
SMAD4-211ENST00000590499 P2RX4Q99571 388 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 TSNAXQ99598 290 aaKnown RBP8.74□□□□□ -1.01
SMAD4-211ENST00000590499 NAA50Q9GZZ1 169 aaKnown RBP8.74□□□□□ -1.01
SMAD4-211ENST00000590499 DIABLOQ9NR28 239 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 METTL1Q9UBP6 276 aaKnown RBP8.74□□□□□ -1.01
SMAD4-211ENST00000590499 WSB1Q9Y6I7 421 aa8.74□□□□□ -1.01
SMAD4-211ENST00000590499 SLC25A17O43808 307 aa8.73□□□□□ -1.01
SMAD4-211ENST00000590499 SOX15O60248 233 aa8.73□□□□□ -1.01
SMAD4-211ENST00000590499 MYCNOSP40205 109 aa8.73□□□□□ -1.01
SMAD4-211ENST00000590499 ALDH3B2P48448 385 aa8.73□□□□□ -1.01
SMAD4-211ENST00000590499 RPS16P62249 146 aaKnown RBP8.73□□□□□ -1.01
SMAD4-211ENST00000590499 MRGPRG-AS1Q2M3A8 158 aa8.73□□□□□ -1.01
SMAD4-211ENST00000590499 ZNF562Q6V9R5 426 aa8.73□□□□□ -1.01
SMAD4-211ENST00000590499 ZNF645Q8N7E2 425 aa8.73□□□□□ -1.01
SMAD4-211ENST00000590499 SAMD12Q8N8I0 201 aa8.73□□□□□ -1.01
SMAD4-211ENST00000590499 RAX2Q96IS3 184 aa8.73□□□□□ -1.01
SMAD4-211ENST00000590499 ADTRPQ96IZ2 230 aa8.73□□□□□ -1.01
SMAD4-211ENST00000590499 KLK15Q9H2R5 256 aa8.73□□□□□ -1.01
SMAD4-211ENST00000590499 ANAPC10Q9UM13 185 aa8.73□□□□□ -1.01
SMAD4-211ENST00000590499 RBM7Q9Y580 266 aaKnown RBP8.73□□□□□ -1.01
SMAD4-211ENST00000590499 NUBP2Q9Y5Y2 271 aa8.73□□□□□ -1.01
SMAD4-211ENST00000590499 SRRM4A7MD48 611 aaKnown RBP8.72□□□□□ -1.01
SMAD4-211ENST00000590499 NUDT19A8MXV4 375 aa8.72□□□□□ -1.01
SMAD4-211ENST00000590499 ARPC1BO15143 372 aaKnown RBP8.72□□□□□ -1.01
SMAD4-211ENST00000590499 CA2P00918 260 aa8.72□□□□□ -1.01
SMAD4-211ENST00000590499 EIF4EP06730 217 aaKnown RBP8.72□□□□□ -1.01
SMAD4-211ENST00000590499 RRASP10301 218 aa8.72□□□□□ -1.01
SMAD4-211ENST00000590499 IGLL1P15814 213 aa8.72□□□□□ -1.01
SMAD4-211ENST00000590499 HOXA5P20719 270 aa8.72□□□□□ -1.01
SMAD4-211ENST00000590499 CBX5P45973 191 aa8.72□□□□□ -1.01
SMAD4-211ENST00000590499 LGALS7P47929 136 aa8.72□□□□□ -1.01
SMAD4-211ENST00000590499 LUMP51884 338 aaPredicted RBP8.72□□□□□ -1.01
SMAD4-211ENST00000590499 TAS2R20P59543 309 aa8.72□□□□□ -1.01
SMAD4-211ENST00000590499 PLGLAQ15195 96 aa8.72□□□□□ -1.01
SMAD4-211ENST00000590499 RTL8BQ17RB0 113 aa8.72□□□□□ -1.01
SMAD4-211ENST00000590499 OVCH2Q7RTZ1 564 aa8.72□□□□□ -1.01
SMAD4-211ENST00000590499 TCTEX1D1Q8N7M0 179 aa8.72□□□□□ -1.01
SMAD4-211ENST00000590499 BVESQ8NE79 360 aa8.72□□□□□ -1.01
SMAD4-211ENST00000590499 S100A16Q96FQ6 103 aaKnown RBP8.72□□□□□ -1.01
SMAD4-211ENST00000590499 RCC1LQ96I51 464 aaKnown RBP8.72□□□□□ -1.01
SMAD4-211ENST00000590499 HARBI1Q96MB7 349 aa8.72□□□□□ -1.01
SMAD4-211ENST00000590499 MRPS26Q9BYN8 205 aaKnown RBP8.72□□□□□ -1.01
SMAD4-211ENST00000590499 RBMX2Q9Y388 322 aaKnown RBP8.72□□□□□ -1.01
SMAD4-211ENST00000590499 DNAH9Q9NYC9 4486 aa8.71□□□□□ -1.01
SMAD4-211ENST00000590499 J3QRK9 145 aa8.71□□□□□ -1.02
SMAD4-211ENST00000590499 CCL24O00175 119 aa8.71□□□□□ -1.02
SMAD4-211ENST00000590499 SLC22A5O76082 557 aa8.71□□□□□ -1.02
SMAD4-211ENST00000590499 APOA1P02647 267 aa8.71□□□□□ -1.02
SMAD4-211ENST00000590499 LINC00310P59036 64 aa8.71□□□□□ -1.02
SMAD4-211ENST00000590499 RPL30P62888 115 aaKnown RBP8.71□□□□□ -1.02
SMAD4-211ENST00000590499 PJVKQ0ZLH3 352 aa8.71□□□□□ -1.02
SMAD4-211ENST00000590499 FHL3Q13643 280 aa8.71□□□□□ -1.02
SMAD4-211ENST00000590499 MSMO1Q15800 293 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms