RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 IGKV1-39P01597 117 aa18.07■□□□□ 0.48
ATG4D-209ENST00000588857 IGKV1D-39P04432 117 aa18.07■□□□□ 0.48
ATG4D-209ENST00000588857 CD99P14209 185 aa18.07■□□□□ 0.48
ATG4D-209ENST00000588857 TAGLNQ01995 201 aaKnown RBP18.07■□□□□ 0.48
ATG4D-209ENST00000588857 DIAPH2-AS1Q14236 149 aa18.07■□□□□ 0.48
ATG4D-209ENST00000588857 RTL8BQ17RB0 113 aa18.07■□□□□ 0.48
ATG4D-209ENST00000588857 PDZD9Q8IXQ8 264 aa18.07■□□□□ 0.48
ATG4D-209ENST00000588857 LINC01356Q8N9X3 169 aa18.07■□□□□ 0.48
ATG4D-209ENST00000588857 RPEQ96AT9 228 aa18.07■□□□□ 0.48
ATG4D-209ENST00000588857 RRNAD1Q96FB5 475 aaKnown RBP18.07■□□□□ 0.48
ATG4D-209ENST00000588857 SPIN2AQ99865 258 aa18.07■□□□□ 0.48
ATG4D-209ENST00000588857 SPIN2BQ9BPZ2 258 aa18.07■□□□□ 0.48
ATG4D-209ENST00000588857 PLEKHA2Q9HB19 425 aa18.07■□□□□ 0.48
ATG4D-209ENST00000588857 COMMD9Q9P000 198 aa18.07■□□□□ 0.48
ATG4D-209ENST00000588857 CR1P17927 2039 aa18.06■□□□□ 0.48
ATG4D-209ENST00000588857 TRAV20A0A0B4J274 112 aa18.06■□□□□ 0.48
ATG4D-209ENST00000588857 LEUTXA8MZ59 168 aa18.06■□□□□ 0.48
ATG4D-209ENST00000588857 APOA2P02652 100 aa18.06■□□□□ 0.48
ATG4D-209ENST00000588857 C1QBP02746 253 aa18.06■□□□□ 0.48
ATG4D-209ENST00000588857 GAPDHP04406 335 aaKnown RBP18.06■□□□□ 0.48
ATG4D-209ENST00000588857 CEACAM3P40198 252 aa18.06■□□□□ 0.48
ATG4D-209ENST00000588857 LHX4Q969G2 390 aa18.06■□□□□ 0.48
ATG4D-209ENST00000588857 LSM10Q969L4 123 aaKnown RBP18.06■□□□□ 0.48
ATG4D-209ENST00000588857 RANBP3Q9H6Z4 567 aaPredicted RBP18.06■□□□□ 0.48
ATG4D-209ENST00000588857 ODF3BA8MYP8 253 aa18.05■□□□□ 0.48
ATG4D-209ENST00000588857 TXNL1O43396 289 aa18.05■□□□□ 0.48
ATG4D-209ENST00000588857 KRASP01116 189 aa18.05■□□□□ 0.48
ATG4D-209ENST00000588857 EIF2B2P49770 351 aaKnown RBP18.05■□□□□ 0.48
ATG4D-209ENST00000588857 FGL1Q08830 312 aa18.05■□□□□ 0.48
ATG4D-209ENST00000588857 NMSQ5H8A3 153 aa18.05■□□□□ 0.48
ATG4D-209ENST00000588857 THOC7Q6I9Y2 204 aaKnown RBP18.05■□□□□ 0.48
ATG4D-209ENST00000588857 SLC35D1Q9NTN3 355 aa18.05■□□□□ 0.48
ATG4D-209ENST00000588857 DPM3Q9P2X0 92 aa18.05■□□□□ 0.48
ATG4D-209ENST00000588857 IGKV1-5P01602 117 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 RRASP10301 218 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 GATA3P23771 443 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 UBE2E1P51965 193 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 LGALS4P56470 323 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 ZBTB8BQ8NAP8 495 aaPredicted RBP18.04■□□□□ 0.48
ATG4D-209ENST00000588857 NABP2Q9BQ15 211 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 HIF1ANQ9NWT6 349 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 A0A1W2PRD5 423 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 A0A1W2PRF3 423 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 A0A1W2PRM7 423 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 LY6LH3BQJ8 138 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 H7C2Y5 167 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 CRYZL1O95825 349 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 EPHA1P21709 976 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 G6PCP35575 357 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 DHRS7BQ6IAN0 325 aaPredicted RBP18.04■□□□□ 0.48
ATG4D-209ENST00000588857 NOXA1Q86UR1 476 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 MAPK1IP1LQ8NDC0 245 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 OR5AN1Q8NGI8 311 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 PPP1R1CQ8WVI7 109 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 R3HDM4Q96D70 268 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 AUP1Q9Y679 476 aa18.04■□□□□ 0.48
ATG4D-209ENST00000588857 H0YJW9 148 aa18.03■□□□□ 0.48
ATG4D-209ENST00000588857 MC5RP33032 325 aa18.03■□□□□ 0.48
ATG4D-209ENST00000588857 LRRC37A5PQ49AS3 106 aa18.03■□□□□ 0.48
ATG4D-209ENST00000588857 Q5BKY6 102 aa18.03■□□□□ 0.48
ATG4D-209ENST00000588857 TPTE2P1Q5T6R2 138 aa18.03■□□□□ 0.48
ATG4D-209ENST00000588857 FAM219AQ8IW50 185 aa18.03■□□□□ 0.48
ATG4D-209ENST00000588857 GPR146Q96CH1 333 aa18.03■□□□□ 0.48
ATG4D-209ENST00000588857 MMP24Q9Y5R2 645 aa18.03■□□□□ 0.48
ATG4D-209ENST00000588857 NQO2P16083 231 aa18.02■□□□□ 0.48
ATG4D-209ENST00000588857 ERVK-16P61578 105 aa18.02■□□□□ 0.48
ATG4D-209ENST00000588857 MINOS1Q5TGZ0 78 aa18.02■□□□□ 0.48
ATG4D-209ENST00000588857 MOB3BQ86TA1 216 aa18.02■□□□□ 0.48
ATG4D-209ENST00000588857 HYLS1Q96M11 299 aa18.02■□□□□ 0.48
ATG4D-209ENST00000588857 C7orf69Q9H7B7 122 aa18.02■□□□□ 0.48
ATG4D-209ENST00000588857 MINOS1-NBL1R4GNA1 71 aa18.02■□□□□ 0.48
ATG4D-209ENST00000588857 IGHV1-3A0A0C4DH29 117 aa18.01■□□□□ 0.47
ATG4D-209ENST00000588857 A0A0G2JRQ6 117 aa18.01■□□□□ 0.47
ATG4D-209ENST00000588857 A0A1B0GU03 582 aa18.01■□□□□ 0.47
ATG4D-209ENST00000588857 MARCH11A6NNE9 402 aa18.01■□□□□ 0.47
ATG4D-209ENST00000588857 SLC25A6P12236 298 aa18.01■□□□□ 0.47
ATG4D-209ENST00000588857 PSMB6P28072 239 aa18.01■□□□□ 0.47
ATG4D-209ENST00000588857 RAB13P51153 203 aa18.01■□□□□ 0.47
ATG4D-209ENST00000588857 H2BFWTQ7Z2G1 175 aa18.01■□□□□ 0.47
ATG4D-209ENST00000588857 PDPNQ86YL7 162 aa18.01■□□□□ 0.47
ATG4D-209ENST00000588857 DMBX1Q8NFW5 382 aa18.01■□□□□ 0.47
ATG4D-209ENST00000588857 WASHC3Q9Y3C0 194 aa18.01■□□□□ 0.47
ATG4D-209ENST00000588857 G3V3Q6 166 aa18■□□□□ 0.47
ATG4D-209ENST00000588857 SCGB1D2O95969 90 aa18■□□□□ 0.47
ATG4D-209ENST00000588857 HRASP01112 189 aa18■□□□□ 0.47
ATG4D-209ENST00000588857 GZMKP49863 264 aa18■□□□□ 0.47
ATG4D-209ENST00000588857 IL15RAQ13261 267 aa18■□□□□ 0.47
ATG4D-209ENST00000588857 SMCO1Q147U7 214 aa18■□□□□ 0.47
ATG4D-209ENST00000588857 TMEM249Q2WGJ8 235 aa18■□□□□ 0.47
ATG4D-209ENST00000588857 LHFPL4Q7Z7J7 247 aa18■□□□□ 0.47
ATG4D-209ENST00000588857 TBL2Q9Y4P3 447 aaKnown RBP18■□□□□ 0.47
ATG4D-209ENST00000588857 HILPDAQ9Y5L2 63 aa18■□□□□ 0.47
ATG4D-209ENST00000588857 TGFAP01135 160 aa18■□□□□ 0.47
ATG4D-209ENST00000588857 IGKV1-16P04430 117 aa18■□□□□ 0.47
ATG4D-209ENST00000588857 FOSL1P15407 271 aa18■□□□□ 0.47
ATG4D-209ENST00000588857 NKX2-5P52952 324 aaPredicted RBP18■□□□□ 0.47
ATG4D-209ENST00000588857 S100A10P60903 97 aa18■□□□□ 0.47
ATG4D-209ENST00000588857 IZUMO4Q1ZYL8 232 aa18■□□□□ 0.47
ATG4D-209ENST00000588857 LDLRAD2Q5SZI1 272 aa18■□□□□ 0.47
ATG4D-209ENST00000588857 OR1S1Q8NH92 325 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms