RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 SLA2Q9H6Q3 261 aa11.22□□□□□ -0.61
DDX39A-208ENST00000588692 TPSG1Q9NRR2 321 aa11.22□□□□□ -0.61
DDX39A-208ENST00000588692 ANXA10Q9UJ72 324 aa11.22□□□□□ -0.61
DDX39A-208ENST00000588692 WI2-2373I1.2A0A1W2PRP0 233 aa11.21□□□□□ -0.61
DDX39A-208ENST00000588692 SHOXO15266 292 aa11.21□□□□□ -0.61
DDX39A-208ENST00000588692 SSX5O60225 188 aa11.21□□□□□ -0.61
DDX39A-208ENST00000588692 HLA-DQB1P01920 261 aa11.21□□□□□ -0.61
DDX39A-208ENST00000588692 CRYGBP07316 175 aa11.21□□□□□ -0.61
DDX39A-208ENST00000588692 LGALS1P09382 135 aaKnown RBP11.21□□□□□ -0.61
DDX39A-208ENST00000588692 GNB1P62873 340 aa11.21□□□□□ -0.61
DDX39A-208ENST00000588692 TSPAN14Q8NG11 270 aa11.21□□□□□ -0.61
DDX39A-208ENST00000588692 OR5H6Q8NGV6 325 aa11.21□□□□□ -0.61
DDX39A-208ENST00000588692 TMEM68Q96MH6 324 aa11.21□□□□□ -0.61
DDX39A-208ENST00000588692 DIABLOQ9NR28 239 aa11.21□□□□□ -0.61
DDX39A-208ENST00000588692 SPATA2Q9UM82 520 aa11.21□□□□□ -0.61
DDX39A-208ENST00000588692 TRAV18A0A075B6X5 111 aa11.2□□□□□ -0.62
DDX39A-208ENST00000588692 SEC14L6B5MCN3 397 aa11.2□□□□□ -0.62
DDX39A-208ENST00000588692 H3BUA1 57 aa11.2□□□□□ -0.62
DDX39A-208ENST00000588692 ARPC1BO15143 372 aaKnown RBP11.2□□□□□ -0.62
DDX39A-208ENST00000588692 AIREO43918 545 aa11.2□□□□□ -0.62
DDX39A-208ENST00000588692 CNIH1O95406 144 aa11.2□□□□□ -0.62
DDX39A-208ENST00000588692 INSL3P51460 131 aa11.2□□□□□ -0.62
DDX39A-208ENST00000588692 VMA21Q3ZAQ7 101 aa11.2□□□□□ -0.62
DDX39A-208ENST00000588692 GRPEL2Q8TAA5 225 aa11.2□□□□□ -0.62
DDX39A-208ENST00000588692 OSR1Q8TAX0 266 aaPredicted RBP11.2□□□□□ -0.62
DDX39A-208ENST00000588692 OR5B12Q96R08 314 aa11.2□□□□□ -0.62
DDX39A-208ENST00000588692 LINC00473A8K010 186 aa11.19□□□□□ -0.62
DDX39A-208ENST00000588692 NFYAP23511 347 aaPredicted RBP11.19□□□□□ -0.62
DDX39A-208ENST00000588692 TPPP2P59282 170 aa11.19□□□□□ -0.62
DDX39A-208ENST00000588692 UBE2KP61086 200 aa11.19□□□□□ -0.62
DDX39A-208ENST00000588692 SSBP2P81877 361 aaPredicted RBP11.19□□□□□ -0.62
DDX39A-208ENST00000588692 ASPHD1Q5U4P2 390 aa11.19□□□□□ -0.62
DDX39A-208ENST00000588692 TEX45Q8NA69 505 aa11.19□□□□□ -0.62
DDX39A-208ENST00000588692 MRPS7Q9Y2R9 242 aaKnown RBP11.19□□□□□ -0.62
DDX39A-208ENST00000588692 PRELID3BQ9Y3B1 194 aa11.19□□□□□ -0.62
DDX39A-208ENST00000588692 LINC01619G3V211 115 aa11.19□□□□□ -0.62
DDX39A-208ENST00000588692 CREBL2O60519 120 aaPredicted RBP11.19□□□□□ -0.62
DDX39A-208ENST00000588692 TUSC2O75896 110 aa11.19□□□□□ -0.62
DDX39A-208ENST00000588692 CRYZL1O95825 349 aa11.19□□□□□ -0.62
DDX39A-208ENST00000588692 ARPC4P59998 168 aa11.19□□□□□ -0.62
DDX39A-208ENST00000588692 DEFB121Q5J5C9 76 aa11.19□□□□□ -0.62
DDX39A-208ENST00000588692 KCTD9Q7L273 389 aa11.19□□□□□ -0.62
DDX39A-208ENST00000588692 OVCH2Q7RTZ1 564 aa11.19□□□□□ -0.62
DDX39A-208ENST00000588692 POC5Q8NA72 575 aa11.19□□□□□ -0.62
DDX39A-208ENST00000588692 BEST4Q8NFU0 473 aa11.19□□□□□ -0.62
DDX39A-208ENST00000588692 CASTOR1Q8WTX7 329 aa11.19□□□□□ -0.62
DDX39A-208ENST00000588692 YIPF6Q96EC8 236 aa11.19□□□□□ -0.62
DDX39A-208ENST00000588692 RBMX2Q9Y388 322 aaKnown RBP11.19□□□□□ -0.62
DDX39A-208ENST00000588692 SRRM4A7MD48 611 aaKnown RBP11.18□□□□□ -0.62
DDX39A-208ENST00000588692 BRI3O95415 125 aa11.18□□□□□ -0.62
DDX39A-208ENST00000588692 TRGV3P03979 118 aa11.18□□□□□ -0.62
DDX39A-208ENST00000588692 CBX5P45973 191 aa11.18□□□□□ -0.62
DDX39A-208ENST00000588692 PJVKQ0ZLH3 352 aa11.18□□□□□ -0.62
DDX39A-208ENST00000588692 HOGA1Q86XE5 327 aa11.18□□□□□ -0.62
DDX39A-208ENST00000588692 MS4A10Q96PG2 267 aa11.18□□□□□ -0.62
DDX39A-208ENST00000588692 HSD17B10Q99714 261 aaKnown RBP11.18□□□□□ -0.62
DDX39A-208ENST00000588692 ALX4Q9H161 411 aaPredicted RBP11.18□□□□□ -0.62
DDX39A-208ENST00000588692 AUNIPQ9H7T9 357 aa11.18□□□□□ -0.62
DDX39A-208ENST00000588692 SCOCQ9UIL1 159 aa11.18□□□□□ -0.62
DDX39A-208ENST00000588692 IGKV1D-13A0A0B4J2D9 117 aa11.17□□□□□ -0.62
DDX39A-208ENST00000588692 A0A0G2JLM5 398 aa11.17□□□□□ -0.62
DDX39A-208ENST00000588692 J3QRK9 145 aa11.17□□□□□ -0.62
DDX39A-208ENST00000588692 OVOL1O14753 267 aa11.17□□□□□ -0.62
DDX39A-208ENST00000588692 IGLV2-14P01704 120 aa11.17□□□□□ -0.62
DDX39A-208ENST00000588692 IGKV1-13P0DP09 117 aa11.17□□□□□ -0.62
DDX39A-208ENST00000588692 MSMO1Q15800 293 aa11.17□□□□□ -0.62
DDX39A-208ENST00000588692 PRSS8Q16651 343 aa11.17□□□□□ -0.62
DDX39A-208ENST00000588692 UBE2NLQ5JXB2 153 aa11.17□□□□□ -0.62
DDX39A-208ENST00000588692 ZNF429Q86V71 674 aa11.17□□□□□ -0.62
DDX39A-208ENST00000588692 DCUN1D4Q92564 292 aa11.17□□□□□ -0.62
DDX39A-208ENST00000588692 S100A16Q96FQ6 103 aaKnown RBP11.17□□□□□ -0.62
DDX39A-208ENST00000588692 RHOVQ96L33 236 aa11.17□□□□□ -0.62
DDX39A-208ENST00000588692 ZNF355PQ9NSJ1 428 aa11.17□□□□□ -0.62
DDX39A-208ENST00000588692 IGHV4OR15-8A0A075B7B6 117 aa11.16□□□□□ -0.62
DDX39A-208ENST00000588692 A0A087WW49 117 aa11.16□□□□□ -0.62
DDX39A-208ENST00000588692 TRIM64CA6NLI5 447 aa11.16□□□□□ -0.62
DDX39A-208ENST00000588692 XRCC3O43542 346 aa11.16□□□□□ -0.62
DDX39A-208ENST00000588692 FCGR3BO75015 233 aa11.16□□□□□ -0.62
DDX39A-208ENST00000588692 IGHV3-11P01762 117 aa11.16□□□□□ -0.62
DDX39A-208ENST00000588692 HSPB1P04792 205 aaKnown RBP11.16□□□□□ -0.62
DDX39A-208ENST00000588692 AADACP22760 399 aa11.16□□□□□ -0.62
DDX39A-208ENST00000588692 TGFBR1P36897 503 aa11.16□□□□□ -0.62
DDX39A-208ENST00000588692 RPS19P39019 145 aaKnown RBP11.16□□□□□ -0.62
DDX39A-208ENST00000588692 CDK10Q15131 360 aa11.16□□□□□ -0.62
DDX39A-208ENST00000588692 ZNF66Q6ZN08 573 aa11.16□□□□□ -0.62
DDX39A-208ENST00000588692 GVQW1Q8N7I0 195 aa11.16□□□□□ -0.62
DDX39A-208ENST00000588692 OR4S2Q8NH73 311 aa11.16□□□□□ -0.62
DDX39A-208ENST00000588692 C13orf42A0A1B0GVH6 325 aa11.15□□□□□ -0.62
DDX39A-208ENST00000588692 SAA1P0DJI8 122 aaPredicted RBP11.15□□□□□ -0.62
DDX39A-208ENST00000588692 FCGR2CP31995 323 aa11.15□□□□□ -0.62
DDX39A-208ENST00000588692 ECI1P42126 302 aa11.15□□□□□ -0.62
DDX39A-208ENST00000588692 SLURP1P55000 103 aa11.15□□□□□ -0.62
DDX39A-208ENST00000588692 EIF4EBP1Q13541 118 aaPredicted RBP11.15□□□□□ -0.62
DDX39A-208ENST00000588692 TNXAQ16473 311 aa11.15□□□□□ -0.62
DDX39A-208ENST00000588692 MRGPRG-AS1Q2M3A8 158 aa11.15□□□□□ -0.62
DDX39A-208ENST00000588692 MMD2Q8IY49 270 aa11.15□□□□□ -0.62
DDX39A-208ENST00000588692 OR5T1Q8NG75 326 aa11.15□□□□□ -0.62
DDX39A-208ENST00000588692 OR13F1Q8NGS4 319 aa11.15□□□□□ -0.62
DDX39A-208ENST00000588692 TCTEX1D2Q8WW35 142 aa11.15□□□□□ -0.62
DDX39A-208ENST00000588692 SRSF12Q8WXF0 261 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms