RNA–Protein interactions for RNA: ENST00000588551.5

POP4-208, Transcript of POP4 homolog, ribonuclease P/MRP subunit, human

TSL 3

Gene POP4, Length 789 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POP4-208	ENST00000588551	RTL8B	Q17RB0	113 aa		10.85	□□□□□ -0.67
POP4-208	ENST00000588551	MRGPRG-AS1	Q2M3A8	158 aa		10.85	□□□□□ -0.67
POP4-208	ENST00000588551	ZNF66	Q6ZN08	573 aa		10.85	□□□□□ -0.67
POP4-208	ENST00000588551	ZNF818P	Q6ZRF7	136 aa		10.85	□□□□□ -0.67
POP4-208	ENST00000588551	NDUFA11	Q86Y39	141 aa		10.85	□□□□□ -0.67
POP4-208	ENST00000588551	ZBTB34	Q8NCN2	500 aa		10.85	□□□□□ -0.67
POP4-208	ENST00000588551	OR6F1	Q8NGZ6	308 aa		10.85	□□□□□ -0.67
POP4-208	ENST00000588551	FCAMR	Q8WWV6	532 aa		10.85	□□□□□ -0.67
POP4-208	ENST00000588551	HSD17B10	Q99714	261 aa	Known RBP	10.85	□□□□□ -0.67
POP4-208	ENST00000588551	ZNF580	Q9UK33	172 aa		10.85	□□□□□ -0.67
POP4-208	ENST00000588551	FBXO7	Q9Y3I1	522 aa		10.85	□□□□□ -0.67
POP4-208	ENST00000588551	VWF	P04275	2813 aa		10.85	□□□□□ -0.67
POP4-208	ENST00000588551	PKD1L1	Q8TDX9	2849 aa		10.85	□□□□□ -0.67
POP4-208	ENST00000588551	DPPA5	A6NC42	116 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	GABARAP	H6UMI1	98 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551		M0QYG6	137 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	CTDSPL	O15194	276 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	SHOX	O15266	292 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	TNFSF12	O43508	249 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	WIPF1	O43516	503 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	SLC25A17	O43808	307 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	FCGR3B	O75015	233 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	CD3D	P04234	171 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	HERV-K104	P61576	105 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	SSBP2	P81877	361 aa	Predicted RBP	10.84	□□□□□ -0.67
POP4-208	ENST00000588551	PJVK	Q0ZLH3	352 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	NSUN5P1	Q3KNT7	163 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	VAX1	Q5SQQ9	334 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	FOXB2	Q5VYV0	432 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	PYHIN1	Q6K0P9	492 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	ZNF562	Q6V9R5	426 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	KCTD9	Q7L273	389 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	TMEM17	Q86X19	198 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	DGCR14	Q96DF8	476 aa	Known RBP	10.84	□□□□□ -0.67
POP4-208	ENST00000588551	HARBI1	Q96MB7	349 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	CLCC1	Q96S66	551 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	TINAGL1	Q9GZM7	467 aa	Predicted RBP	10.84	□□□□□ -0.67
POP4-208	ENST00000588551	MMP27	Q9H306	513 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	WSB1	Q9Y6I7	421 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	WNK1	Q9H4A3	2382 aa		10.84	□□□□□ -0.67
POP4-208	ENST00000588551	TCRBV4S1A1T	A0A5B7	111 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551		G3V318	75 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	ATP6V0E1	O15342	81 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	CSF1	P09603	554 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	PPIF	P30405	207 aa	Known RBP	10.83	□□□□□ -0.68
POP4-208	ENST00000588551	MRPS10	P82664	201 aa	Known RBP	10.83	□□□□□ -0.68
POP4-208	ENST00000588551	IL18	Q14116	193 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	PLGLA	Q15195	96 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	C2orf68	Q2NKX9	166 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	C19orf54	Q5BKX5	351 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	OR2B11	Q5JQS5	317 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	AADACL3	Q5VUY0	350 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	PPP1R27	Q86WC6	154 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	TMEM229B	Q8NBD8	167 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	OR4X2	Q8NGF9	303 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	OR4D10	Q8NGI6	311 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	OSR1	Q8TAX0	266 aa	Predicted RBP	10.83	□□□□□ -0.68
POP4-208	ENST00000588551	SMIM4	Q8WVI0	70 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	TCTEX1D2	Q8WW35	142 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	FXYD6	Q9H0Q3	95 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	RABL2A	Q9UBK7	228 aa	Predicted RBP	10.83	□□□□□ -0.68
POP4-208	ENST00000588551	RABL2B	Q9UNT1	228 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	PRELID3B	Q9Y3B1	194 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	NUBP2	Q9Y5Y2	271 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	A3GALT2	U3KPV4	340 aa		10.83	□□□□□ -0.68
POP4-208	ENST00000588551	FABP12	A6NFH5	140 aa		10.82	□□□□□ -0.68
POP4-208	ENST00000588551	ARPC1B	O15143	372 aa	Known RBP	10.82	□□□□□ -0.68
POP4-208	ENST00000588551	RAMP3	O60896	148 aa		10.82	□□□□□ -0.68
POP4-208	ENST00000588551	CA2	P00918	260 aa		10.82	□□□□□ -0.68
POP4-208	ENST00000588551	IGHG4	P01861	327 aa		10.82	□□□□□ -0.68
POP4-208	ENST00000588551	CD74	P04233	296 aa		10.82	□□□□□ -0.68
POP4-208	ENST00000588551	CRIP2	P52943	208 aa	Predicted RBP	10.82	□□□□□ -0.68
POP4-208	ENST00000588551	UBE2K	P61086	200 aa		10.82	□□□□□ -0.68
POP4-208	ENST00000588551	TSPAN5	P62079	268 aa		10.82	□□□□□ -0.68
POP4-208	ENST00000588551	SLC35B1	P78383	322 aa		10.82	□□□□□ -0.68
POP4-208	ENST00000588551	CBX3	Q13185	183 aa		10.82	□□□□□ -0.68
POP4-208	ENST00000588551	ACTBL2	Q562R1	376 aa		10.82	□□□□□ -0.68
POP4-208	ENST00000588551	TEX38	Q6PEX7	206 aa		10.82	□□□□□ -0.68
POP4-208	ENST00000588551	LCNL1	Q6ZST4	164 aa		10.82	□□□□□ -0.68
POP4-208	ENST00000588551	COMMD1	Q8N668	190 aa		10.82	□□□□□ -0.68
POP4-208	ENST00000588551	RNF152	Q8N8N0	203 aa		10.82	□□□□□ -0.68
POP4-208	ENST00000588551	TEX45	Q8NA69	505 aa		10.82	□□□□□ -0.68
POP4-208	ENST00000588551	MINDY2	Q8NBR6	621 aa		10.82	□□□□□ -0.68
POP4-208	ENST00000588551	GON7	Q9BXV9	100 aa		10.82	□□□□□ -0.68
POP4-208	ENST00000588551	PARP11	Q9NR21	331 aa		10.82	□□□□□ -0.68
POP4-208	ENST00000588551	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.82	□□□□□ -0.68
POP4-208	ENST00000588551	CMYA5	Q8N3K9	4069 aa		10.81	□□□□□ -0.68
POP4-208	ENST00000588551		A0A1W2PRX2	142 aa		10.81	□□□□□ -0.68
POP4-208	ENST00000588551	GSTZ1	O43708	216 aa	Predicted RBP	10.81	□□□□□ -0.68
POP4-208	ENST00000588551	PGLYRP1	O75594	196 aa	Predicted RBP	10.81	□□□□□ -0.68
POP4-208	ENST00000588551	OPN1MW	P04001	364 aa		10.81	□□□□□ -0.68
POP4-208	ENST00000588551	ZNF735	P0CB33	412 aa		10.81	□□□□□ -0.68
POP4-208	ENST00000588551	OPN1MW2	P0DN77	364 aa		10.81	□□□□□ -0.68
POP4-208	ENST00000588551	OPN1MW3	P0DN78	364 aa		10.81	□□□□□ -0.68
POP4-208	ENST00000588551	VDAC1	P21796	283 aa		10.81	□□□□□ -0.68
POP4-208	ENST00000588551	SSBP1	Q04837	148 aa	Known RBP	10.81	□□□□□ -0.68
POP4-208	ENST00000588551	FOXE3	Q13461	319 aa		10.81	□□□□□ -0.68
POP4-208	ENST00000588551	RNASE10	Q5GAN6	216 aa	Known RBP	10.81	□□□□□ -0.68
POP4-208	ENST00000588551	IDO2	Q6ZQW0	420 aa		10.81	□□□□□ -0.68
POP4-208	ENST00000588551	C18orf65	Q6ZTR6	163 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms