RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 AIREO43918 545 aa15.2■□□□□ 0.02
TPM4-208ENST00000588410 SSX5O60225 188 aa15.2■□□□□ 0.02
TPM4-208ENST00000588410 SOX15O60248 233 aa15.2■□□□□ 0.02
TPM4-208ENST00000588410 SLC22A5O76082 557 aa15.2■□□□□ 0.02
TPM4-208ENST00000588410 NFYAP23511 347 aaPredicted RBP15.2■□□□□ 0.02
TPM4-208ENST00000588410 DUTP33316 252 aaKnown RBP15.2■□□□□ 0.02
TPM4-208ENST00000588410 DGCR2P98153 550 aa15.2■□□□□ 0.02
TPM4-208ENST00000588410 TMEM177Q53S58 311 aa15.2■□□□□ 0.02
TPM4-208ENST00000588410 ZNF645Q8N7E2 425 aa15.2■□□□□ 0.02
TPM4-208ENST00000588410 CASTOR1Q8WTX7 329 aa15.2■□□□□ 0.02
TPM4-208ENST00000588410 SLC25A38Q96DW6 304 aa15.2■□□□□ 0.02
TPM4-208ENST00000588410 MS4A10Q96PG2 267 aa15.2■□□□□ 0.02
TPM4-208ENST00000588410 ANXA10Q9UJ72 324 aa15.2■□□□□ 0.02
TPM4-208ENST00000588410 WI2-2373I1.2A0A1W2PRP0 233 aa15.19■□□□□ 0.02
TPM4-208ENST00000588410 IGLV2-23P01705 113 aa15.19■□□□□ 0.02
TPM4-208ENST00000588410 ARPC4P59998 168 aa15.19■□□□□ 0.02
TPM4-208ENST00000588410 VMA21Q3ZAQ7 101 aa15.19■□□□□ 0.02
TPM4-208ENST00000588410 ZNF355PQ9NSJ1 428 aa15.19■□□□□ 0.02
TPM4-208ENST00000588410 ARPC1BO15143 372 aaKnown RBP15.18■□□□□ 0.02
TPM4-208ENST00000588410 TUSC2O75896 110 aa15.18■□□□□ 0.02
TPM4-208ENST00000588410 CRYZL1O95825 349 aa15.18■□□□□ 0.02
TPM4-208ENST00000588410 HLA-DQB1P01920 261 aa15.18■□□□□ 0.02
TPM4-208ENST00000588410 TPPP2P59282 170 aa15.18■□□□□ 0.02
TPM4-208ENST00000588410 DCUN1D5Q9BTE7 237 aa15.18■□□□□ 0.02
TPM4-208ENST00000588410 SLA2Q9H6Q3 261 aa15.18■□□□□ 0.02
TPM4-208ENST00000588410 SPATA2Q9UM82 520 aa15.18■□□□□ 0.02
TPM4-208ENST00000588410 PRELID3BQ9Y3B1 194 aa15.18■□□□□ 0.02
TPM4-208ENST00000588410 TGP01266 2768 aa15.18■□□□□ 0.02
TPM4-208ENST00000588410 LINC00473A8K010 186 aa15.17■□□□□ 0.02
TPM4-208ENST00000588410 RAMP3O60896 148 aa15.17■□□□□ 0.02
TPM4-208ENST00000588410 CRYGBP07316 175 aa15.17■□□□□ 0.02
TPM4-208ENST00000588410 LGALS1P09382 135 aaKnown RBP15.17■□□□□ 0.02
TPM4-208ENST00000588410 LSM3P62310 102 aaKnown RBP15.17■□□□□ 0.02
TPM4-208ENST00000588410 PJVKQ0ZLH3 352 aa15.17■□□□□ 0.02
TPM4-208ENST00000588410 DCTN2Q13561 401 aaKnown RBP15.17■□□□□ 0.02
TPM4-208ENST00000588410 BEST4Q8NFU0 473 aa15.17■□□□□ 0.02
TPM4-208ENST00000588410 OSR1Q8TAX0 266 aaPredicted RBP15.17■□□□□ 0.02
TPM4-208ENST00000588410 DDB2Q92466 427 aa15.17■□□□□ 0.02
TPM4-208ENST00000588410 YIPF6Q96EC8 236 aa15.17■□□□□ 0.02
TPM4-208ENST00000588410 ALX4Q9H161 411 aaPredicted RBP15.17■□□□□ 0.02
TPM4-208ENST00000588410 MRPS7Q9Y2R9 242 aaKnown RBP15.17■□□□□ 0.02
TPM4-208ENST00000588410 RBMX2Q9Y388 322 aaKnown RBP15.17■□□□□ 0.02
TPM4-208ENST00000588410 SRRM4A7MD48 611 aaKnown RBP15.16■□□□□ 0.02
TPM4-208ENST00000588410 LINC01619G3V211 115 aa15.16■□□□□ 0.02
TPM4-208ENST00000588410 FCGR3BO75015 233 aa15.16■□□□□ 0.02
TPM4-208ENST00000588410 IGHV3-11P01762 117 aa15.16■□□□□ 0.02
TPM4-208ENST00000588410 TRGV3P03979 118 aa15.16■□□□□ 0.02
TPM4-208ENST00000588410 TGFBR1P36897 503 aa15.16■□□□□ 0.02
TPM4-208ENST00000588410 UBE2KP61086 200 aa15.16■□□□□ 0.02
TPM4-208ENST00000588410 KCTD9Q7L273 389 aa15.16■□□□□ 0.02
TPM4-208ENST00000588410 TEX45Q8NA69 505 aa15.16■□□□□ 0.02
TPM4-208ENST00000588410 POC5Q8NA72 575 aa15.16■□□□□ 0.02
TPM4-208ENST00000588410 OR5T1Q8NG75 326 aa15.16■□□□□ 0.02
TPM4-208ENST00000588410 S100A16Q96FQ6 103 aaKnown RBP15.16■□□□□ 0.02
TPM4-208ENST00000588410 TMEM68Q96MH6 324 aa15.16■□□□□ 0.02
TPM4-208ENST00000588410 PHB2Q99623 299 aa15.16■□□□□ 0.02
TPM4-208ENST00000588410 AUNIPQ9H7T9 357 aa15.16■□□□□ 0.02
TPM4-208ENST00000588410 RPS19P39019 145 aaKnown RBP15.15■□□□□ 0.02
TPM4-208ENST00000588410 CBX5P45973 191 aa15.15■□□□□ 0.02
TPM4-208ENST00000588410 ASPHD1Q5U4P2 390 aa15.15■□□□□ 0.02
TPM4-208ENST00000588410 HOGA1Q86XE5 327 aa15.15■□□□□ 0.02
TPM4-208ENST00000588410 GVQW1Q8N7I0 195 aa15.15■□□□□ 0.02
TPM4-208ENST00000588410 IGKV1D-13A0A0B4J2D9 117 aa15.14■□□□□ 0.01
TPM4-208ENST00000588410 C13orf42A0A1B0GVH6 325 aa15.14■□□□□ 0.01
TPM4-208ENST00000588410 H3BUA1 57 aa15.14■□□□□ 0.01
TPM4-208ENST00000588410 OVOL1O14753 267 aa15.14■□□□□ 0.01
TPM4-208ENST00000588410 CREBL2O60519 120 aaPredicted RBP15.14■□□□□ 0.01
TPM4-208ENST00000588410 IGKV1-13P0DP09 117 aa15.14■□□□□ 0.01
TPM4-208ENST00000588410 ECI1P42126 302 aa15.14■□□□□ 0.01
TPM4-208ENST00000588410 INSL3P51460 131 aa15.14■□□□□ 0.01
TPM4-208ENST00000588410 TNXAQ16473 311 aa15.14■□□□□ 0.01
TPM4-208ENST00000588410 OR2B11Q5JQS5 317 aa15.14■□□□□ 0.01
TPM4-208ENST00000588410 UBE2NLQ5JXB2 153 aa15.14■□□□□ 0.01
TPM4-208ENST00000588410 TCTEX1D2Q8WW35 142 aa15.14■□□□□ 0.01
TPM4-208ENST00000588410 DCUN1D4Q92564 292 aa15.14■□□□□ 0.01
TPM4-208ENST00000588410 HSD17B10Q99714 261 aaKnown RBP15.14■□□□□ 0.01
TPM4-208ENST00000588410 ACTL6BO94805 426 aa15.13■□□□□ 0.01
TPM4-208ENST00000588410 HSPB1P04792 205 aaKnown RBP15.13■□□□□ 0.01
TPM4-208ENST00000588410 FCER2P06734 321 aa15.13■□□□□ 0.01
TPM4-208ENST00000588410 FCGR2CP31995 323 aa15.13■□□□□ 0.01
TPM4-208ENST00000588410 SSBP2P81877 361 aaPredicted RBP15.13■□□□□ 0.01
TPM4-208ENST00000588410 PRSS8Q16651 343 aa15.13■□□□□ 0.01
TPM4-208ENST00000588410 IDO2Q6ZQW0 420 aa15.13■□□□□ 0.01
TPM4-208ENST00000588410 SAMD12Q8N8I0 201 aa15.13■□□□□ 0.01
TPM4-208ENST00000588410 ACOT12Q8WYK0 555 aa15.13■□□□□ 0.01
TPM4-208ENST00000588410 RHOVQ96L33 236 aa15.13■□□□□ 0.01
TPM4-208ENST00000588410 IFT46Q9NQC8 304 aa15.13■□□□□ 0.01
TPM4-208ENST00000588410 SCOCQ9UIL1 159 aa15.13■□□□□ 0.01
TPM4-208ENST00000588410 IGHV4OR15-8A0A075B7B6 117 aa15.12■□□□□ 0.01
TPM4-208ENST00000588410 A0A087WW49 117 aa15.12■□□□□ 0.01
TPM4-208ENST00000588410 A0A0G2JLM5 398 aa15.12■□□□□ 0.01
TPM4-208ENST00000588410 MSGN1A6NI15 193 aa15.12■□□□□ 0.01
TPM4-208ENST00000588410 MPPED1O15442 326 aa15.12■□□□□ 0.01
TPM4-208ENST00000588410 XRCC3O43542 346 aa15.12■□□□□ 0.01
TPM4-208ENST00000588410 PTHLHP12272 177 aa15.12■□□□□ 0.01
TPM4-208ENST00000588410 SLURP1P55000 103 aa15.12■□□□□ 0.01
TPM4-208ENST00000588410 RPL30P62888 115 aaKnown RBP15.12■□□□□ 0.01
TPM4-208ENST00000588410 OVCH2Q7RTZ1 564 aa15.12■□□□□ 0.01
TPM4-208ENST00000588410 OR4S2Q8NH73 311 aa15.12■□□□□ 0.01
TPM4-208ENST00000588410 SECTM1Q8WVN6 248 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms