RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 SURF2Q15527 256 aaPredicted RBP8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 RTL8BQ17RB0 113 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 KRTAP24-1Q3LI83 254 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 ABCA11PQ4W5N1 156 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 TMEM177Q53S58 311 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 DHRS7BQ6IAN0 325 aaPredicted RBP8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 C16orf82Q7Z2V1 217 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 C5orf56Q8N8D9 126 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 Q8N9W7 124 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 ADAD2Q8NCV1 583 aaKnown RBP8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 FLYWCH2Q96CP2 140 aaKnown RBP8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 ZNF486Q96H40 463 aaPredicted RBP8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 TSC22D3Q99576 134 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 C1RLQ9NZP8 487 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 MOB4Q9Y3A3 225 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 PRELID3BQ9Y3B1 194 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 JMJD1CQ15652 2540 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 SETD2Q9BYW2 2564 aaPredicted RBP8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 CENPXA8MT69 81 aa8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 SHOXO15266 292 aa8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 CRYBA1P05813 215 aa8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 RRASP10301 218 aa8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 F2RP25116 425 aa8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 MMDQ15546 238 aa8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 ZNF585BQ52M93 769 aa8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 C11orf88Q6PI97 169 aa8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 Q6ZSV7 163 aa8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 SPAG16Q8N0X2 631 aa8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 NPBQ8NG41 125 aa8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 OR4C13Q8NGP0 309 aa8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 ZFAND2BQ8WV99 257 aa8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 TMEM230Q96A57 120 aa8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 RAB18Q9NP72 206 aa8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 COPZ2Q9P299 210 aa8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 FLVCR2Q9UPI3 526 aa8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 C14orf166Q9Y224 244 aaKnown RBP8.51□□□□□ -1.05
SMARCA4-213ENST00000587988 RNF212BA8MTL3 300 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 RRHO14718 337 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 NBR2O15453 112 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 FGF16O43320 207 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 NDUFB6O95139 128 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 NDUFA3O95167 84 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 S100GP29377 79 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 KIR2DS2P43631 304 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 RIPPLY3P57055 190 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 RPL15P61313 204 aaKnown RBP8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 ASAH1Q13510 395 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 PSG5Q15238 335 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 RBMS2Q15434 407 aaKnown RBP8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 SP6Q3SY56 376 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 VKORC1L1Q8N0U8 176 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 FAM71E2Q8N5Q1 922 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 OR4S2Q8NH73 311 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 HARBI1Q96MB7 349 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 SCGB3A2Q96PL1 93 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 TP53RKQ96S44 253 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 RNF5Q99942 180 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 SLC25A21Q9BQT8 299 aaPredicted RBP8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 FBXL15Q9H469 300 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 ZNF702PQ9H963 129 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 TPSG1Q9NRR2 321 aa8.5□□□□□ -1.05
SMARCA4-213ENST00000587988 C3orf85A0A1B0GTC6 90 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 CRYM-AS1A6NIL9 109 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 FCN1O00602 326 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 RBFOX2O43251 390 aaKnown RBP eCLIP8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 SLC25A17O43808 307 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 TSPAN9O75954 239 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 S1PR2O95136 353 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 HPRT1P00492 218 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 IGKV1-39P01597 117 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 IGKV1D-39P04432 117 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 CRYGBP07316 175 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 HKR1P10072 659 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 AKR1C4P17516 323 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 SLC6A1P30531 599 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 LPAR6P43657 344 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 LGALS7P47929 136 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 CBX3Q13185 183 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 C5orf64Q2M2E5 130 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 C9orf152Q5JTZ5 239 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 TMED4Q7Z7H5 227 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 CCDC71LQ8N9Z2 235 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 POC5Q8NA72 575 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 OR8H1Q8NGG4 311 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 OSR1Q8TAX0 266 aaPredicted RBP8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 CLCC1Q96S66 551 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 TSNAXQ99598 290 aaKnown RBP8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 RASL11BQ9BPW5 248 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 NPFFR1Q9GZQ6 430 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 NAA60Q9H7X0 242 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 LIN7CQ9NUP9 197 aaKnown RBP8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 KIAA1456Q9P272 454 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 METTL1Q9UBP6 276 aaKnown RBP8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 SIGLEC9Q9Y336 463 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 NF1P21359 2839 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 C2CD3Q4AC94 2353 aa8.49□□□□□ -1.05
SMARCA4-213ENST00000587988 TEX13DA0A0J9YY54 714 aaPredicted RBP8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 LINC01548A6NM66 108 aa8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 H0Y980 276 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms