RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 TRAV18A0A075B6X5 111 aa13.73□□□□□ -0.21
TPM4-206ENST00000587201 A0A087WXM4 84 aa13.73□□□□□ -0.21
TPM4-206ENST00000587201 ARPC1BO15143 372 aaKnown RBP13.73□□□□□ -0.21
TPM4-206ENST00000587201 SSX5O60225 188 aa13.73□□□□□ -0.21
TPM4-206ENST00000587201 ZNF645Q8N7E2 425 aa13.73□□□□□ -0.21
TPM4-206ENST00000587201 TSPAN14Q8NG11 270 aa13.73□□□□□ -0.21
TPM4-206ENST00000587201 SLC25A38Q96DW6 304 aa13.73□□□□□ -0.21
TPM4-206ENST00000587201 MS4A10Q96PG2 267 aa13.73□□□□□ -0.21
TPM4-206ENST00000587201 ALX4Q9H161 411 aaPredicted RBP13.73□□□□□ -0.21
TPM4-206ENST00000587201 ANXA10Q9UJ72 324 aa13.73□□□□□ -0.21
TPM4-206ENST00000587201 OR2W1Q9Y3N9 320 aa13.73□□□□□ -0.21
TPM4-206ENST00000587201 SRRM4A7MD48 611 aaKnown RBP13.72□□□□□ -0.21
TPM4-206ENST00000587201 LINC00473A8K010 186 aa13.72□□□□□ -0.21
TPM4-206ENST00000587201 AIREO43918 545 aa13.72□□□□□ -0.21
TPM4-206ENST00000587201 TNFAIP8O95379 198 aa13.72□□□□□ -0.21
TPM4-206ENST00000587201 CRYGBP07316 175 aa13.72□□□□□ -0.21
TPM4-206ENST00000587201 TPPP2P59282 170 aa13.72□□□□□ -0.21
TPM4-206ENST00000587201 PJVKQ0ZLH3 352 aa13.72□□□□□ -0.21
TPM4-206ENST00000587201 ASPHD1Q5U4P2 390 aa13.72□□□□□ -0.21
TPM4-206ENST00000587201 DDB2Q92466 427 aa13.72□□□□□ -0.21
TPM4-206ENST00000587201 ZNF355PQ9NSJ1 428 aa13.72□□□□□ -0.21
TPM4-206ENST00000587201 A0A0A6YYH2 397 aa13.71□□□□□ -0.21
TPM4-206ENST00000587201 A6NJ64 397 aa13.71□□□□□ -0.21
TPM4-206ENST00000587201 LINC01619G3V211 115 aa13.71□□□□□ -0.21
TPM4-206ENST00000587201 RAMP3O60896 148 aa13.71□□□□□ -0.21
TPM4-206ENST00000587201 CRYZL1O95825 349 aa13.71□□□□□ -0.21
TPM4-206ENST00000587201 IGHV3-11P01762 117 aa13.71□□□□□ -0.21
TPM4-206ENST00000587201 HLA-DQB1P01920 261 aa13.71□□□□□ -0.21
TPM4-206ENST00000587201 LGALS1P09382 135 aaKnown RBP13.71□□□□□ -0.21
TPM4-206ENST00000587201 TGFBR1P36897 503 aa13.71□□□□□ -0.21
TPM4-206ENST00000587201 ARPC4P59998 168 aa13.71□□□□□ -0.21
TPM4-206ENST00000587201 VMA21Q3ZAQ7 101 aa13.71□□□□□ -0.21
TPM4-206ENST00000587201 SLA2Q9H6Q3 261 aa13.71□□□□□ -0.21
TPM4-206ENST00000587201 DIABLOQ9NR28 239 aa13.71□□□□□ -0.21
TPM4-206ENST00000587201 SPATA2Q9UM82 520 aa13.71□□□□□ -0.21
TPM4-206ENST00000587201 TMEM127O75204 238 aa13.7□□□□□ -0.22
TPM4-206ENST00000587201 TUSC2O75896 110 aa13.7□□□□□ -0.22
TPM4-206ENST00000587201 SLC22A5O76082 557 aa13.7□□□□□ -0.22
TPM4-206ENST00000587201 TRGV3P03979 118 aa13.7□□□□□ -0.22
TPM4-206ENST00000587201 LSM3P62310 102 aaKnown RBP13.7□□□□□ -0.22
TPM4-206ENST00000587201 SSBP2P81877 361 aaPredicted RBP13.7□□□□□ -0.22
TPM4-206ENST00000587201 CROCCP3Q8IVE0 287 aa13.7□□□□□ -0.22
TPM4-206ENST00000587201 BEST4Q8NFU0 473 aa13.7□□□□□ -0.22
TPM4-206ENST00000587201 OR5T1Q8NG75 326 aa13.7□□□□□ -0.22
TPM4-206ENST00000587201 DCUN1D4Q92564 292 aa13.7□□□□□ -0.22
TPM4-206ENST00000587201 YIPF6Q96EC8 236 aa13.7□□□□□ -0.22
TPM4-206ENST00000587201 DCUN1D5Q9BTE7 237 aa13.7□□□□□ -0.22
TPM4-206ENST00000587201 RBMX2Q9Y388 322 aaKnown RBP13.7□□□□□ -0.22
TPM4-206ENST00000587201 IGKV1D-13A0A0B4J2D9 117 aa13.69□□□□□ -0.22
TPM4-206ENST00000587201 OVOL1O14753 267 aa13.69□□□□□ -0.22
TPM4-206ENST00000587201 FCGR3BO75015 233 aa13.69□□□□□ -0.22
TPM4-206ENST00000587201 IGKV1-13P0DP09 117 aa13.69□□□□□ -0.22
TPM4-206ENST00000587201 ECI1P42126 302 aa13.69□□□□□ -0.22
TPM4-206ENST00000587201 SLURP1P55000 103 aa13.69□□□□□ -0.22
TPM4-206ENST00000587201 UBE2KP61086 200 aa13.69□□□□□ -0.22
TPM4-206ENST00000587201 KCTD9Q7L273 389 aa13.69□□□□□ -0.22
TPM4-206ENST00000587201 GVQW1Q8N7I0 195 aa13.69□□□□□ -0.22
TPM4-206ENST00000587201 TEX45Q8NA69 505 aa13.69□□□□□ -0.22
TPM4-206ENST00000587201 POC5Q8NA72 575 aa13.69□□□□□ -0.22
TPM4-206ENST00000587201 OSR1Q8TAX0 266 aaPredicted RBP13.69□□□□□ -0.22
TPM4-206ENST00000587201 RHOVQ96L33 236 aa13.69□□□□□ -0.22
TPM4-206ENST00000587201 TMEM68Q96MH6 324 aa13.69□□□□□ -0.22
TPM4-206ENST00000587201 AUNIPQ9H7T9 357 aa13.69□□□□□ -0.22
TPM4-206ENST00000587201 SCOCQ9UIL1 159 aa13.69□□□□□ -0.22
TPM4-206ENST00000587201 PRELID3BQ9Y3B1 194 aa13.69□□□□□ -0.22
TPM4-206ENST00000587201 IGHV4OR15-8A0A075B7B6 117 aa13.68□□□□□ -0.22
TPM4-206ENST00000587201 A0A087WW49 117 aa13.68□□□□□ -0.22
TPM4-206ENST00000587201 H3BUA1 57 aa13.68□□□□□ -0.22
TPM4-206ENST00000587201 RPS19P39019 145 aaKnown RBP13.68□□□□□ -0.22
TPM4-206ENST00000587201 DCTN2Q13561 401 aaKnown RBP13.68□□□□□ -0.22
TPM4-206ENST00000587201 TNXAQ16473 311 aa13.68□□□□□ -0.22
TPM4-206ENST00000587201 OR2B11Q5JQS5 317 aa13.68□□□□□ -0.22
TPM4-206ENST00000587201 IDO2Q6ZQW0 420 aa13.68□□□□□ -0.22
TPM4-206ENST00000587201 HOGA1Q86XE5 327 aa13.68□□□□□ -0.22
TPM4-206ENST00000587201 DLX4Q92988 240 aaPredicted RBP13.68□□□□□ -0.22
TPM4-206ENST00000587201 PHB2Q99623 299 aa13.68□□□□□ -0.22
TPM4-206ENST00000587201 MRPS7Q9Y2R9 242 aaKnown RBP13.68□□□□□ -0.22
TPM4-206ENST00000587201 IGLV2-14P01704 120 aa13.67□□□□□ -0.22
TPM4-206ENST00000587201 HSPB1P04792 205 aaKnown RBP13.67□□□□□ -0.22
TPM4-206ENST00000587201 FCER2P06734 321 aa13.67□□□□□ -0.22
TPM4-206ENST00000587201 PTHLHP12272 177 aa13.67□□□□□ -0.22
TPM4-206ENST00000587201 INSL3P51460 131 aa13.67□□□□□ -0.22
TPM4-206ENST00000587201 RPL30P62888 115 aaKnown RBP13.67□□□□□ -0.22
TPM4-206ENST00000587201 PRSS8Q16651 343 aa13.67□□□□□ -0.22
TPM4-206ENST00000587201 MRGPRG-AS1Q2M3A8 158 aa13.67□□□□□ -0.22
TPM4-206ENST00000587201 ACOT12Q8WYK0 555 aa13.67□□□□□ -0.22
TPM4-206ENST00000587201 S100A16Q96FQ6 103 aaKnown RBP13.67□□□□□ -0.22
TPM4-206ENST00000587201 HSD17B10Q99714 261 aaKnown RBP13.67□□□□□ -0.22
TPM4-206ENST00000587201 C13orf42A0A1B0GVH6 325 aa13.66□□□□□ -0.22
TPM4-206ENST00000587201 MSGN1A6NI15 193 aa13.66□□□□□ -0.22
TPM4-206ENST00000587201 SAA1P0DJI8 122 aaPredicted RBP13.66□□□□□ -0.22
TPM4-206ENST00000587201 APELAP0DMC3 54 aa13.66□□□□□ -0.22
TPM4-206ENST00000587201 FCGR2CP31995 323 aa13.66□□□□□ -0.22
TPM4-206ENST00000587201 CBX5P45973 191 aa13.66□□□□□ -0.22
TPM4-206ENST00000587201 CD69Q07108 199 aa13.66□□□□□ -0.22
TPM4-206ENST00000587201 UBE2NLQ5JXB2 153 aa13.66□□□□□ -0.22
TPM4-206ENST00000587201 OVCH2Q7RTZ1 564 aa13.66□□□□□ -0.22
TPM4-206ENST00000587201 ZNF429Q86V71 674 aa13.66□□□□□ -0.22
TPM4-206ENST00000587201 TCTEX1D2Q8WW35 142 aa13.66□□□□□ -0.22
TPM4-206ENST00000587201 PRR25Q96S07 402 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms