RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 OR5B12Q96R08 314 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 HSD17B10Q99714 261 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 CXXC4Q9H2H0 198 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 CLCF1Q9UBD9 225 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 GAB2Q9UQC2 676 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 RBMXL2O75526 392 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 TNFSF15O95150 251 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 TFF1P04155 84 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 RPS16P62249 146 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 DEFA6Q01524 100 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 COL10A1Q03692 680 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 ATP1A1-AS1Q5TC04 95 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 WDR31Q8NA23 367 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 TMEM178AQ8NBL3 297 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 ANAPC16Q96DE5 110 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 SMCO3A2RU48 225 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 MARCH11A6NNE9 402 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 PPP5D1E7EU14 171 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 C17orf112F2Z3M2 114 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 IFNL4K9M1U5 179 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 PAGE4O60829 102 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 VENTXO95231 258 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 HRASP01112 189 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 IGKV3-15P01624 115 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 LINC00205P59089 165 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 PMP22Q01453 160 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 RTP5Q14D33 572 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 FAM214BQ7L5A3 538 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 Q8N7P7 452 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 OR13A1Q8NGR1 328 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 NEIL1Q96FI4 390 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 DIRC2Q96SL1 478 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 WISP2O76076 250 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 TAS2R60P59551 318 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 SPINK9Q5DT21 86 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 COA6Q5JTJ3 125 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 PRAMEF6Q5VXH4 476 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 TPRX1Q8N7U7 411 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 ELOVL1Q9BW60 279 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 METRNQ9UJH8 293 aa11.84□□□□□ -0.51
CDK5RAP3-237ENST00000585163 IGHV3-43A0A0B4J1X8 118 aa11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 C15orf62A8K5M9 175 aa11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 SLC31A2O15432 143 aa11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 IGHV3-43DP0DP04 118 aa11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 TUBG1P23258 451 aa11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 FAM3BP58499 235 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 TMPRSS7Q7RTY8 843 aa11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 RNASEH2CQ8TDP1 164 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 S100PBPQ96BU1 408 aa11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 NEU1Q99519 415 aa11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 PSG11Q9UQ72 335 aa11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 GYPAP02724 150 aa11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 DEFA4P12838 97 aa11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 CDC34P49427 236 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 GUSBP1Q15486 140 aa11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 SMIM21Q3B7S5 101 aa11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 ACOT6Q3I5F7 207 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 DHRS13Q6UX07 377 aa11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 OR1P1Q8NH06 330 aa11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 OR5R1Q8NH85 324 aa11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 RFESDQ8TAC1 157 aa11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 PCGF1Q9BSM1 259 aa11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 COLQQ9Y215 455 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-237ENST00000585163 PTPRBP23467 1997 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 GPR179Q6PRD1 2367 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 DEFB108AA8MXU0 73 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 C11orf94C9JXX5 98 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 C15orf65H3BRN8 121 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 CDX4O14627 284 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 AGFG2O95081 481 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 KITLGP21583 273 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 PKIAP61925 76 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 HTD2P86397 168 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 PAX5Q02548 391 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 FOXF2Q12947 444 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 QTRT1Q9BXR0 403 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 WASF3Q9UPY6 502 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 WDR83OSQ9Y284 106 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 A0A1W2PPQ1 181 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 GGCTO75223 188 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 AMBPP02760 352 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 ADH4P08319 380 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 NPPCP23582 126 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 CD1BP29016 333 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 TNFSF10P50591 281 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 TMEM249Q2WGJ8 235 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 SSX9Q7RTT3 188 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 R3HDM4Q96D70 268 aa11.82□□□□□ -0.52
CDK5RAP3-237ENST00000585163 DVL1O14640 695 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 SPINT2O43291 252 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 TIMM8AO60220 97 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 G0S2P27469 103 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 SRP14P37108 136 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 JOSD1Q15040 202 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 SAPCD1Q5SSQ6 148 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 TMEM170AQ8WVE7 144 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 RAB1CQ92928 201 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 C14orf144Q96I85 54 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 TRIB1Q96RU8 372 aa11.81□□□□□ -0.52
CDK5RAP3-237ENST00000585163 MSL2Q9HCI7 577 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms