RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 ZNF645Q8N7E2 425 aa15.9■□□□□ 0.14
SS18-224ENST00000584083 GVQW1Q8N7I0 195 aa15.9■□□□□ 0.14
SS18-224ENST00000584083 LFNGQ8NES3 379 aa15.9■□□□□ 0.14
SS18-224ENST00000584083 BEST4Q8NFU0 473 aa15.9■□□□□ 0.14
SS18-224ENST00000584083 OR5M8Q8NGP6 311 aa15.9■□□□□ 0.14
SS18-224ENST00000584083 CASTOR1Q8WTX7 329 aa15.9■□□□□ 0.14
SS18-224ENST00000584083 S100A16Q96FQ6 103 aaKnown RBP15.9■□□□□ 0.14
SS18-224ENST00000584083 TRIM64CA6NLI5 447 aa15.89■□□□□ 0.13
SS18-224ENST00000584083 LINC00473A8K010 186 aa15.89■□□□□ 0.13
SS18-224ENST00000584083 TUSC2O75896 110 aa15.89■□□□□ 0.13
SS18-224ENST00000584083 SLC22A5O76082 557 aa15.89■□□□□ 0.13
SS18-224ENST00000584083 CRYZL1O95825 349 aa15.89■□□□□ 0.13
SS18-224ENST00000584083 FCER2P06734 321 aa15.89■□□□□ 0.13
SS18-224ENST00000584083 CD40LGP29965 261 aa15.89■□□□□ 0.13
SS18-224ENST00000584083 PJVKQ0ZLH3 352 aa15.89■□□□□ 0.13
SS18-224ENST00000584083 OR11H1Q8NG94 326 aa15.89■□□□□ 0.13
SS18-224ENST00000584083 OR1N2Q8NGR9 330 aa15.89■□□□□ 0.13
SS18-224ENST00000584083 DDB2Q92466 427 aa15.89■□□□□ 0.13
SS18-224ENST00000584083 FUNDC2Q9BWH2 189 aa15.89■□□□□ 0.13
SS18-224ENST00000584083 IGKV1D-13A0A0B4J2D9 117 aa15.88■□□□□ 0.13
SS18-224ENST00000584083 IGKV1-13P0DP09 117 aa15.88■□□□□ 0.13
SS18-224ENST00000584083 PTHLHP12272 177 aa15.88■□□□□ 0.13
SS18-224ENST00000584083 KRTAP10-11P60412 298 aa15.88■□□□□ 0.13
SS18-224ENST00000584083 UBE2NLQ5JXB2 153 aa15.88■□□□□ 0.13
SS18-224ENST00000584083 PYHIN1Q6K0P9 492 aa15.88■□□□□ 0.13
SS18-224ENST00000584083 HOGA1Q86XE5 327 aa15.88■□□□□ 0.13
SS18-224ENST00000584083 SAMD12Q8N8I0 201 aa15.88■□□□□ 0.13
SS18-224ENST00000584083 DCUN1D5Q9BTE7 237 aa15.88■□□□□ 0.13
SS18-224ENST00000584083 RBMX2Q9Y388 322 aaKnown RBP15.88■□□□□ 0.13
SS18-224ENST00000584083 SRRM4A7MD48 611 aaKnown RBP15.87■□□□□ 0.13
SS18-224ENST00000584083 I3L521 148 aa15.87■□□□□ 0.13
SS18-224ENST00000584083 ARPC1BO15143 372 aaKnown RBP15.87■□□□□ 0.13
SS18-224ENST00000584083 XRCC3O43542 346 aa15.87■□□□□ 0.13
SS18-224ENST00000584083 CRYGBP07316 175 aa15.87■□□□□ 0.13
SS18-224ENST00000584083 NCS1P62166 190 aa15.87■□□□□ 0.13
SS18-224ENST00000584083 VMA21Q3ZAQ7 101 aa15.87■□□□□ 0.13
SS18-224ENST00000584083 KCTD9Q7L273 389 aa15.87■□□□□ 0.13
SS18-224ENST00000584083 MS4A10Q96PG2 267 aa15.87■□□□□ 0.13
SS18-224ENST00000584083 PRELID3BQ9Y3B1 194 aa15.87■□□□□ 0.13
SS18-224ENST00000584083 MEIS3P1A6NDR6 274 aa15.86■□□□□ 0.13
SS18-224ENST00000584083 FCGR3BO75015 233 aa15.86■□□□□ 0.13
SS18-224ENST00000584083 OR8U8P0C7N1 319 aa15.86■□□□□ 0.13
SS18-224ENST00000584083 FCGR2CP31995 323 aa15.86■□□□□ 0.13
SS18-224ENST00000584083 CBX5P45973 191 aa15.86■□□□□ 0.13
SS18-224ENST00000584083 TPPP2P59282 170 aa15.86■□□□□ 0.13
SS18-224ENST00000584083 RUNX1Q01196 453 aa15.86■□□□□ 0.13
SS18-224ENST00000584083 ZNF616Q08AN1 781 aa15.86■□□□□ 0.13
SS18-224ENST00000584083 EGFEM1PQ0D2K5 195 aa15.86■□□□□ 0.13
SS18-224ENST00000584083 FHL3Q13643 280 aa15.86■□□□□ 0.13
SS18-224ENST00000584083 OR2B11Q5JQS5 317 aa15.86■□□□□ 0.13
SS18-224ENST00000584083 TMEM69Q5SWH9 247 aa15.86■□□□□ 0.13
SS18-224ENST00000584083 OSR1Q8TAX0 266 aaPredicted RBP15.86■□□□□ 0.13
SS18-224ENST00000584083 SLC25A46Q96AG3 418 aa15.86■□□□□ 0.13
SS18-224ENST00000584083 IFT46Q9NQC8 304 aa15.86■□□□□ 0.13
SS18-224ENST00000584083 ZNF355PQ9NSJ1 428 aa15.86■□□□□ 0.13
SS18-224ENST00000584083 MRPS7Q9Y2R9 242 aaKnown RBP15.86■□□□□ 0.13
SS18-224ENST00000584083 UBE2KP61086 200 aa15.85■□□□□ 0.13
SS18-224ENST00000584083 VBP1P61758 197 aa15.85■□□□□ 0.13
SS18-224ENST00000584083 TEX45Q8NA69 505 aa15.85■□□□□ 0.13
SS18-224ENST00000584083 OR5T1Q8NG75 326 aa15.85■□□□□ 0.13
SS18-224ENST00000584083 OR13F1Q8NGS4 319 aa15.85■□□□□ 0.13
SS18-224ENST00000584083 SECTM1Q8WVN6 248 aa15.85■□□□□ 0.13
SS18-224ENST00000584083 KCTD12Q96CX2 325 aaKnown RBP15.85■□□□□ 0.13
SS18-224ENST00000584083 HSD17B10Q99714 261 aaKnown RBP15.85■□□□□ 0.13
SS18-224ENST00000584083 ALX4Q9H161 411 aaPredicted RBP15.85■□□□□ 0.13
SS18-224ENST00000584083 TNCP24821 2201 aa15.84■□□□□ 0.13
SS18-224ENST00000584083 WI2-2373I1.2A0A1W2PRP0 233 aa15.84■□□□□ 0.13
SS18-224ENST00000584083 SEC14L6B5MCN3 397 aa15.84■□□□□ 0.13
SS18-224ENST00000584083 IGLV2-14P01704 120 aa15.84■□□□□ 0.13
SS18-224ENST00000584083 TRGV3P03979 118 aa15.84■□□□□ 0.13
SS18-224ENST00000584083 AADACP22760 399 aa15.84■□□□□ 0.13
SS18-224ENST00000584083 RPL30P62888 115 aaKnown RBP15.84■□□□□ 0.13
SS18-224ENST00000584083 SSBP2P81877 361 aaPredicted RBP15.84■□□□□ 0.13
SS18-224ENST00000584083 C9orf66Q5T8R8 295 aa15.84■□□□□ 0.13
SS18-224ENST00000584083 IDO2Q6ZQW0 420 aa15.84■□□□□ 0.13
SS18-224ENST00000584083 TCTEX1D2Q8WW35 142 aa15.84■□□□□ 0.13
SS18-224ENST00000584083 SLA2Q9H6Q3 261 aa15.84■□□□□ 0.13
SS18-224ENST00000584083 TAS2R8Q9NYW2 309 aa15.84■□□□□ 0.13
SS18-224ENST00000584083 ZMAT5Q9UDW3 170 aaKnown RBP15.84■□□□□ 0.13
SS18-224ENST00000584083 K7EIL1 84 aa15.83■□□□□ 0.12
SS18-224ENST00000584083 IGHV3-11P01762 117 aa15.83■□□□□ 0.12
SS18-224ENST00000584083 TAS2R20P59543 309 aa15.83■□□□□ 0.12
SS18-224ENST00000584083 TNXAQ16473 311 aa15.83■□□□□ 0.12
SS18-224ENST00000584083 DEFB121Q5J5C9 76 aa15.83■□□□□ 0.12
SS18-224ENST00000584083 OR5AP2Q8NGF4 316 aa15.83■□□□□ 0.12
SS18-224ENST00000584083 SNAPC3Q92966 411 aa15.83■□□□□ 0.12
SS18-224ENST00000584083 PHB2Q99623 299 aa15.83■□□□□ 0.12
SS18-224ENST00000584083 COMMD3Q9UBI1 195 aa15.83■□□□□ 0.12
SS18-224ENST00000584083 PPYP01298 95 aa15.82■□□□□ 0.12
SS18-224ENST00000584083 LGALS1P09382 135 aaKnown RBP15.82■□□□□ 0.12
SS18-224ENST00000584083 SMIM18P0DKX4 95 aa15.82■□□□□ 0.12
SS18-224ENST00000584083 DGCR2P98153 550 aa15.82■□□□□ 0.12
SS18-224ENST00000584083 CDK10Q15131 360 aa15.82■□□□□ 0.12
SS18-224ENST00000584083 PRSS8Q16651 343 aa15.82■□□□□ 0.12
SS18-224ENST00000584083 ASPHD1Q5U4P2 390 aa15.82■□□□□ 0.12
SS18-224ENST00000584083 OVCH2Q7RTZ1 564 aa15.82■□□□□ 0.12
SS18-224ENST00000584083 MFSD4AQ8N468 514 aa15.82■□□□□ 0.12
SS18-224ENST00000584083 POC5Q8NA72 575 aa15.82■□□□□ 0.12
SS18-224ENST00000584083 OR4S2Q8NH73 311 aa15.82■□□□□ 0.12
SS18-224ENST00000584083 ACOT12Q8WYK0 555 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms