RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 SDHAF2Q9NX18 166 aa11.1□□□□□ -0.63
CDC42EP4-208ENST00000582303 NKX1-2Q9UD57 310 aaPredicted RBP11.1□□□□□ -0.63
CDC42EP4-208ENST00000582303 CSMD3Q7Z407 3707 aa11.1□□□□□ -0.63
CDC42EP4-208ENST00000582303 IGKV1-6A0A0C4DH72 117 aa11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 CRYGBP07316 175 aa11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 CSN3P07498 182 aa11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 OR9G9P0C7N8 305 aa11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 TMEM50BP56557 158 aa11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 UBE2KP61086 200 aa11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 PJVKQ0ZLH3 352 aa11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 IL34Q6ZMJ4 242 aa11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 SLC25A42Q86VD7 318 aa11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 OSR1Q8TAX0 266 aaPredicted RBP11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 TMEM203Q969S6 136 aa11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 RAB3CQ96E17 227 aa11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 SPIN2AQ99865 258 aa11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 SPIN2BQ9BPZ2 258 aa11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 GINS4Q9BRT9 223 aa11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 CABLES2Q9BTV7 478 aa11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 RAB22AQ9UL26 194 aa11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 LSM2Q9Y333 95 aaKnown RBP11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 TPRKBQ9Y3C4 175 aa11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 AK6Q9Y3D8 172 aaKnown RBP11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 CEPT1Q9Y6K0 416 aa11.09□□□□□ -0.63
CDC42EP4-208ENST00000582303 TRBV6-7A0A0A0MS04 114 aa11.08□□□□□ -0.64
CDC42EP4-208ENST00000582303 MSGN1A6NI15 193 aa11.08□□□□□ -0.64
CDC42EP4-208ENST00000582303 HSMCR30P0CW71 290 aa11.08□□□□□ -0.64
CDC42EP4-208ENST00000582303 MAP2K4P45985 399 aa11.08□□□□□ -0.64
CDC42EP4-208ENST00000582303 LINC00205P59089 165 aa11.08□□□□□ -0.64
CDC42EP4-208ENST00000582303 SSBP2P81877 361 aaPredicted RBP11.08□□□□□ -0.64
CDC42EP4-208ENST00000582303 ATP5G2Q06055 141 aa11.08□□□□□ -0.64
CDC42EP4-208ENST00000582303 DYRK1AQ13627 763 aa11.08□□□□□ -0.64
CDC42EP4-208ENST00000582303 ARL6IP1Q15041 203 aa11.08□□□□□ -0.64
CDC42EP4-208ENST00000582303 SSX1Q16384 188 aa11.08□□□□□ -0.64
CDC42EP4-208ENST00000582303 TNXAQ16473 311 aa11.08□□□□□ -0.64
CDC42EP4-208ENST00000582303 C2orf76Q3KRA6 126 aa11.08□□□□□ -0.64
CDC42EP4-208ENST00000582303 OGFRL1Q5TC84 451 aaPredicted RBP11.08□□□□□ -0.64
CDC42EP4-208ENST00000582303 ADAD2Q8NCV1 583 aaKnown RBP11.08□□□□□ -0.64
CDC42EP4-208ENST00000582303 KCTD12Q96CX2 325 aaKnown RBP11.08□□□□□ -0.64
CDC42EP4-208ENST00000582303 ACOT13Q9NPJ3 140 aa11.08□□□□□ -0.64
CDC42EP4-208ENST00000582303 V9GY05 133 aa11.08□□□□□ -0.64
CDC42EP4-208ENST00000582303 STARD9Q9P2P6 4700 aa11.07□□□□□ -0.64
CDC42EP4-208ENST00000582303 PDCD5O14737 125 aa11.07□□□□□ -0.64
CDC42EP4-208ENST00000582303 CASQ2O14958 399 aaPredicted RBP11.07□□□□□ -0.64
CDC42EP4-208ENST00000582303 FCGR3AP08637 254 aa11.07□□□□□ -0.64
CDC42EP4-208ENST00000582303 CALRP27797 417 aaKnown RBP11.07□□□□□ -0.64
CDC42EP4-208ENST00000582303 TALDO1P37837 337 aa11.07□□□□□ -0.64
CDC42EP4-208ENST00000582303 CD81P60033 236 aa11.07□□□□□ -0.64
CDC42EP4-208ENST00000582303 PRSS8Q16651 343 aa11.07□□□□□ -0.64
CDC42EP4-208ENST00000582303 PLAC9Q5JTB6 97 aa11.07□□□□□ -0.64
CDC42EP4-208ENST00000582303 NECAP1Q8NC96 275 aa11.07□□□□□ -0.64
CDC42EP4-208ENST00000582303 DYNLRB2Q8TF09 96 aa11.07□□□□□ -0.64
CDC42EP4-208ENST00000582303 SRSF12Q8WXF0 261 aaKnown RBP11.07□□□□□ -0.64
CDC42EP4-208ENST00000582303 ACOT12Q8WYK0 555 aa11.07□□□□□ -0.64
CDC42EP4-208ENST00000582303 THAP7Q9BT49 309 aaPredicted RBP11.07□□□□□ -0.64
CDC42EP4-208ENST00000582303 METTL21EPA6NDL7 271 aa11.06□□□□□ -0.64
CDC42EP4-208ENST00000582303 SLC22A5O76082 557 aa11.06□□□□□ -0.64
CDC42EP4-208ENST00000582303 CRYZL1O95825 349 aa11.06□□□□□ -0.64
CDC42EP4-208ENST00000582303 RHOGP84095 191 aa11.06□□□□□ -0.64
CDC42EP4-208ENST00000582303 MLLT11Q13015 90 aaPredicted RBP11.06□□□□□ -0.64
CDC42EP4-208ENST00000582303 EXOSC2Q13868 293 aaKnown RBP11.06□□□□□ -0.64
CDC42EP4-208ENST00000582303 IGSF11Q5DX21 431 aa11.06□□□□□ -0.64
CDC42EP4-208ENST00000582303 ADAMTSL5Q6ZMM2 481 aa11.06□□□□□ -0.64
CDC42EP4-208ENST00000582303 MMD2Q8IY49 270 aa11.06□□□□□ -0.64
CDC42EP4-208ENST00000582303 NEURL2Q9BR09 285 aa11.06□□□□□ -0.64
CDC42EP4-208ENST00000582303 MRPS7Q9Y2R9 242 aaKnown RBP11.06□□□□□ -0.64
CDC42EP4-208ENST00000582303 PRELID3BQ9Y3B1 194 aa11.06□□□□□ -0.64
CDC42EP4-208ENST00000582303 TRBV12-3P01733 135 aa11.05□□□□□ -0.64
CDC42EP4-208ENST00000582303 GSTT2P0CG29 244 aa11.05□□□□□ -0.64
CDC42EP4-208ENST00000582303 GSTT2BP0CG30 244 aa11.05□□□□□ -0.64
CDC42EP4-208ENST00000582303 DUTP33316 252 aaKnown RBP11.05□□□□□ -0.64
CDC42EP4-208ENST00000582303 CLDN12P56749 244 aa11.05□□□□□ -0.64
CDC42EP4-208ENST00000582303 IRF3Q14653 427 aa11.05□□□□□ -0.64
CDC42EP4-208ENST00000582303 CDK10Q15131 360 aa11.05□□□□□ -0.64
CDC42EP4-208ENST00000582303 TMEM91Q6ZNR0 172 aa11.05□□□□□ -0.64
CDC42EP4-208ENST00000582303 OR10R2Q8NGX6 335 aa11.05□□□□□ -0.64
CDC42EP4-208ENST00000582303 VSTM2AQ8TAG5 236 aa11.05□□□□□ -0.64
CDC42EP4-208ENST00000582303 GFI1Q99684 422 aa11.05□□□□□ -0.64
CDC42EP4-208ENST00000582303 DCUN1D5Q9BTE7 237 aa11.05□□□□□ -0.64
CDC42EP4-208ENST00000582303 AKIP1Q9NQ31 210 aa11.05□□□□□ -0.64
CDC42EP4-208ENST00000582303 GAR1Q9NY12 217 aaKnown RBP11.05□□□□□ -0.64
CDC42EP4-208ENST00000582303 TECRQ9NZ01 308 aaKnown RBP11.05□□□□□ -0.64
CDC42EP4-208ENST00000582303 ZNF230Q9UIE0 474 aaPredicted RBP11.05□□□□□ -0.64
CDC42EP4-208ENST00000582303 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.04□□□□□ -0.64
CDC42EP4-208ENST00000582303 TRBV9A0A0B4J1U6 114 aa11.04□□□□□ -0.64
CDC42EP4-208ENST00000582303 SRRM4A7MD48 611 aaKnown RBP11.04□□□□□ -0.64
CDC42EP4-208ENST00000582303 RGS10O43665 173 aa11.04□□□□□ -0.64
CDC42EP4-208ENST00000582303 DHFRP00374 187 aa11.04□□□□□ -0.64
CDC42EP4-208ENST00000582303 CTXN2P0C2S0 81 aa11.04□□□□□ -0.64
CDC42EP4-208ENST00000582303 APELAP0DMC3 54 aa11.04□□□□□ -0.64
CDC42EP4-208ENST00000582303 SNRPBP14678 240 aaKnown RBP11.04□□□□□ -0.64
CDC42EP4-208ENST00000582303 CD36P16671 472 aa11.04□□□□□ -0.64
CDC42EP4-208ENST00000582303 RAB6AP20340 208 aa11.04□□□□□ -0.64
CDC42EP4-208ENST00000582303 MECP2P51608 486 aaKnown RBP11.04□□□□□ -0.64
CDC42EP4-208ENST00000582303 RPS25P62851 125 aaKnown RBP11.04□□□□□ -0.64
CDC42EP4-208ENST00000582303 ARFRP1Q13795 201 aa11.04□□□□□ -0.64
CDC42EP4-208ENST00000582303 CD300EQ496F6 205 aaPredicted RBP11.04□□□□□ -0.64
CDC42EP4-208ENST00000582303 Q6ZS49 121 aa11.04□□□□□ -0.64
CDC42EP4-208ENST00000582303 SLC16A13Q7RTY0 426 aa11.04□□□□□ -0.64
CDC42EP4-208ENST00000582303 HIPK2Q9H2X6 1198 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms