RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 RNF141Q8WVD5 230 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 LEAP2Q969E1 77 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 NEIL1Q96FI4 390 aaPredicted RBP7.65□□□□□ -1.18
SS18-220ENST00000582092 TMUB1Q9BVT8 246 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 ENY2Q9NPA8 101 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 C19orf12Q9NSK7 152 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 PSENENQ9NZ42 101 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 NUP50Q9UKX7 468 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 ITPR3Q14573 2671 aa7.65□□□□□ -1.19
SS18-220ENST00000582092 MSGN1A6NI15 193 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 RBFOX2O43251 390 aaKnown RBP eCLIP7.64□□□□□ -1.19
SS18-220ENST00000582092 RAMP3O60896 148 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 DFFBO76075 338 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 S1PR2O95136 353 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 IFNA17P01571 189 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 GAPDHP04406 335 aaKnown RBP7.64□□□□□ -1.19
SS18-220ENST00000582092 NQO2P16083 231 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 ARHGDIBP52566 201 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 ATP5J2P56134 94 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 RIPPLY3P57055 190 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 GNB2P62879 340 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 RPL30P62888 115 aaKnown RBP7.64□□□□□ -1.19
SS18-220ENST00000582092 HBG1P69891 147 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 HBG2P69892 147 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 EWSR1Q01844 656 aaKnown RBP eCLIP7.64□□□□□ -1.19
SS18-220ENST00000582092 BAXQ07812 192 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 ZNF273Q14593 569 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 RPL39P5Q59GN2 51 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 CT45A1Q5HYN5 189 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 Q5PR19 223 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 NCR3LG1Q68D85 454 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 FAM53AQ6NSI3 398 aaPredicted RBP7.64□□□□□ -1.19
SS18-220ENST00000582092 CT45A3Q8NHU0 189 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 PCNPQ8WW12 178 aaKnown RBP7.64□□□□□ -1.19
SS18-220ENST00000582092 PERPQ96FX8 193 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 CIB3Q96Q77 187 aaPredicted RBP7.64□□□□□ -1.19
SS18-220ENST00000582092 AGMATQ9BSE5 352 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 LINC00574Q9H8X3 128 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 CHODLQ9H9P2 273 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 LYRM2Q9NU23 88 aaPredicted RBP7.64□□□□□ -1.19
SS18-220ENST00000582092 COA4Q9NYJ1 87 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 FBXL17Q9UF56 701 aa7.64□□□□□ -1.19
SS18-220ENST00000582092 SAA2-SAA4A0A096LPE2 208 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 PPIAL4CA0A0B4J2A2 164 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 MARCH11A6NNE9 402 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 LINC00473A8K010 186 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 H7C2Y5 167 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 TNFRSF13BO14836 293 aaPredicted RBP7.63□□□□□ -1.19
SS18-220ENST00000582092 SCAF4O95104 1147 aaKnown RBP7.63□□□□□ -1.19
SS18-220ENST00000582092 IGKV1-39P01597 117 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 IGKV1-5P01602 117 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 IGHV2-70P01814 119 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 PRH1P02810 166 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 IGKV1D-39P04432 117 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 SOD3P08294 240 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 SAA2P0DJI9 122 aaPredicted RBP7.63□□□□□ -1.19
SS18-220ENST00000582092 PPIAL4GP0DN37 164 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 IAPPP10997 89 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 PAX1P15863 534 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 CCL3L1P16619 93 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 GPR6P46095 362 aaPredicted RBP7.63□□□□□ -1.19
SS18-220ENST00000582092 ZNF134P52741 427 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 TAS2R30P59541 319 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 UBE2KP61086 200 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 BLOC1S1P78537 153 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 NHLH2Q02577 135 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 IZUMO4Q1ZYL8 232 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 TMEM155Q4W5P6 130 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 RPL7L1Q6DKI1 246 aaKnown RBP7.63□□□□□ -1.19
SS18-220ENST00000582092 DHRS7BQ6IAN0 325 aaPredicted RBP7.63□□□□□ -1.19
SS18-220ENST00000582092 SLC25A48Q6ZT89 311 aaKnown RBP7.63□□□□□ -1.19
SS18-220ENST00000582092 SSX9Q7RTT3 188 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 DTX2Q86UW9 622 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 TMEM252Q8N6L7 170 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 OR9G1Q8NH87 305 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 TMEM186Q96B77 213 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 SMIM8Q96KF7 97 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 TSNAXQ99598 290 aaKnown RBP7.63□□□□□ -1.19
SS18-220ENST00000582092 HIPK2Q9H2X6 1198 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 IFI27L2Q9H2X8 130 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 BARX1Q9HBU1 254 aaPredicted RBP7.63□□□□□ -1.19
SS18-220ENST00000582092 SLC35D1Q9NTN3 355 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 ONECUT1Q9UBC0 465 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 WSB1Q9Y6I7 421 aa7.63□□□□□ -1.19
SS18-220ENST00000582092 A0A0G2JRQ6 117 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 FAM90A9PA6NNJ1 464 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 ZNF705EA8MWA4 302 aaPredicted RBP7.62□□□□□ -1.19
SS18-220ENST00000582092 J3QR06 171 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 SLC31A2O15432 143 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 PITX3O75364 302 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 FBXO24O75426 580 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 CST7O76096 145 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 CRYZL1O95825 349 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 F12P00748 615 aaPredicted RBP7.62□□□□□ -1.19
SS18-220ENST00000582092 LIPFP07098 398 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 DANCRP0C864 163 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 SULT1A1P50225 295 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 EFNA4P52798 201 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 ERVFRD-1P60508 538 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 TNFRSF9Q07011 255 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms