RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 HARBI1Q96MB7 349 aa15.17■□□□□ 0.02
SREBF1-220ENST00000581707 AUNIPQ9H7T9 357 aa15.17■□□□□ 0.02
SREBF1-220ENST00000581707 TRIM64CA6NLI5 447 aa15.16■□□□□ 0.02
SREBF1-220ENST00000581707 SRRM4A7MD48 611 aaKnown RBP15.16■□□□□ 0.02
SREBF1-220ENST00000581707 LINC00473A8K010 186 aa15.16■□□□□ 0.02
SREBF1-220ENST00000581707 I3L521 148 aa15.16■□□□□ 0.02
SREBF1-220ENST00000581707 CNIH1O95406 144 aa15.16■□□□□ 0.02
SREBF1-220ENST00000581707 CRYGBP07316 175 aa15.16■□□□□ 0.02
SREBF1-220ENST00000581707 RUNX1Q01196 453 aa15.16■□□□□ 0.02
SREBF1-220ENST00000581707 EGFEM1PQ0D2K5 195 aa15.16■□□□□ 0.02
SREBF1-220ENST00000581707 BEST4Q8NFU0 473 aa15.16■□□□□ 0.02
SREBF1-220ENST00000581707 GRPEL2Q8TAA5 225 aa15.16■□□□□ 0.02
SREBF1-220ENST00000581707 CASTOR1Q8WTX7 329 aa15.16■□□□□ 0.02
SREBF1-220ENST00000581707 OR5B12Q96R08 314 aa15.16■□□□□ 0.02
SREBF1-220ENST00000581707 ARPC1BO15143 372 aaKnown RBP15.15■□□□□ 0.02
SREBF1-220ENST00000581707 SLC22A5O76082 557 aa15.15■□□□□ 0.02
SREBF1-220ENST00000581707 ARPC4P59998 168 aa15.15■□□□□ 0.02
SREBF1-220ENST00000581707 GNB1P62873 340 aa15.15■□□□□ 0.02
SREBF1-220ENST00000581707 PJVKQ0ZLH3 352 aa15.15■□□□□ 0.02
SREBF1-220ENST00000581707 FHL3Q13643 280 aa15.15■□□□□ 0.02
SREBF1-220ENST00000581707 PYHIN1Q6K0P9 492 aa15.15■□□□□ 0.02
SREBF1-220ENST00000581707 HOGA1Q86XE5 327 aa15.15■□□□□ 0.02
SREBF1-220ENST00000581707 GVQW1Q8N7I0 195 aa15.15■□□□□ 0.02
SREBF1-220ENST00000581707 OR1N2Q8NGR9 330 aa15.15■□□□□ 0.02
SREBF1-220ENST00000581707 S100A16Q96FQ6 103 aaKnown RBP15.15■□□□□ 0.02
SREBF1-220ENST00000581707 IGKV1D-13A0A0B4J2D9 117 aa15.14■□□□□ 0.01
SREBF1-220ENST00000581707 XRCC3O43542 346 aa15.14■□□□□ 0.01
SREBF1-220ENST00000581707 CRYZL1O95825 349 aa15.14■□□□□ 0.01
SREBF1-220ENST00000581707 IGKV1-13P0DP09 117 aa15.14■□□□□ 0.01
SREBF1-220ENST00000581707 CD40LGP29965 261 aa15.14■□□□□ 0.01
SREBF1-220ENST00000581707 ZNF616Q08AN1 781 aa15.14■□□□□ 0.01
SREBF1-220ENST00000581707 RBMX2Q9Y388 322 aaKnown RBP15.14■□□□□ 0.01
SREBF1-220ENST00000581707 TUSC2O75896 110 aa15.13■□□□□ 0.01
SREBF1-220ENST00000581707 IGLV2-14P01704 120 aa15.13■□□□□ 0.01
SREBF1-220ENST00000581707 OR8U8P0C7N1 319 aa15.13■□□□□ 0.01
SREBF1-220ENST00000581707 PTHLHP12272 177 aa15.13■□□□□ 0.01
SREBF1-220ENST00000581707 SSBP2P81877 361 aaPredicted RBP15.13■□□□□ 0.01
SREBF1-220ENST00000581707 VMA21Q3ZAQ7 101 aa15.13■□□□□ 0.01
SREBF1-220ENST00000581707 UBE2NLQ5JXB2 153 aa15.13■□□□□ 0.01
SREBF1-220ENST00000581707 SAMD12Q8N8I0 201 aa15.13■□□□□ 0.01
SREBF1-220ENST00000581707 TEX45Q8NA69 505 aa15.13■□□□□ 0.01
SREBF1-220ENST00000581707 OSR1Q8TAX0 266 aaPredicted RBP15.13■□□□□ 0.01
SREBF1-220ENST00000581707 MS4A10Q96PG2 267 aa15.13■□□□□ 0.01
SREBF1-220ENST00000581707 FUNDC2Q9BWH2 189 aa15.13■□□□□ 0.01
SREBF1-220ENST00000581707 PRELID3BQ9Y3B1 194 aa15.13■□□□□ 0.01
SREBF1-220ENST00000581707 TNCP24821 2201 aa15.12■□□□□ 0.01
SREBF1-220ENST00000581707 WI2-2373I1.2A0A1W2PRP0 233 aa15.12■□□□□ 0.01
SREBF1-220ENST00000581707 K7EIL1 84 aa15.12■□□□□ 0.01
SREBF1-220ENST00000581707 CBX5P45973 191 aa15.12■□□□□ 0.01
SREBF1-220ENST00000581707 UBE2KP61086 200 aa15.12■□□□□ 0.01
SREBF1-220ENST00000581707 KCTD9Q7L273 389 aa15.12■□□□□ 0.01
SREBF1-220ENST00000581707 SLC25A46Q96AG3 418 aa15.12■□□□□ 0.01
SREBF1-220ENST00000581707 DCUN1D5Q9BTE7 237 aa15.12■□□□□ 0.01
SREBF1-220ENST00000581707 ZMAT5Q9UDW3 170 aaKnown RBP15.12■□□□□ 0.01
SREBF1-220ENST00000581707 SEC14L6B5MCN3 397 aa15.11■□□□□ 0.01
SREBF1-220ENST00000581707 FCGR3BO75015 233 aa15.11■□□□□ 0.01
SREBF1-220ENST00000581707 FCER2P06734 321 aa15.11■□□□□ 0.01
SREBF1-220ENST00000581707 FCGR2CP31995 323 aa15.11■□□□□ 0.01
SREBF1-220ENST00000581707 TPPP2P59282 170 aa15.11■□□□□ 0.01
SREBF1-220ENST00000581707 NCS1P62166 190 aa15.11■□□□□ 0.01
SREBF1-220ENST00000581707 RPL30P62888 115 aaKnown RBP15.11■□□□□ 0.01
SREBF1-220ENST00000581707 C9orf66Q5T8R8 295 aa15.11■□□□□ 0.01
SREBF1-220ENST00000581707 ASPHD1Q5U4P2 390 aa15.11■□□□□ 0.01
SREBF1-220ENST00000581707 IDO2Q6ZQW0 420 aa15.11■□□□□ 0.01
SREBF1-220ENST00000581707 OR5T1Q8NG75 326 aa15.11■□□□□ 0.01
SREBF1-220ENST00000581707 OR13F1Q8NGS4 319 aa15.11■□□□□ 0.01
SREBF1-220ENST00000581707 HSD17B10Q99714 261 aaKnown RBP15.11■□□□□ 0.01
SREBF1-220ENST00000581707 ALX4Q9H161 411 aaPredicted RBP15.11■□□□□ 0.01
SREBF1-220ENST00000581707 SLA2Q9H6Q3 261 aa15.11■□□□□ 0.01
SREBF1-220ENST00000581707 ZNF355PQ9NSJ1 428 aa15.11■□□□□ 0.01
SREBF1-220ENST00000581707 MRPS7Q9Y2R9 242 aaKnown RBP15.11■□□□□ 0.01
SREBF1-220ENST00000581707 LGALS1P09382 135 aaKnown RBP15.1■□□□□ 0.01
SREBF1-220ENST00000581707 AADACP22760 399 aa15.1■□□□□ 0.01
SREBF1-220ENST00000581707 VBP1P61758 197 aa15.1■□□□□ 0.01
SREBF1-220ENST00000581707 PRSS8Q16651 343 aa15.1■□□□□ 0.01
SREBF1-220ENST00000581707 MRGPRG-AS1Q2M3A8 158 aa15.1■□□□□ 0.01
SREBF1-220ENST00000581707 OR2B11Q5JQS5 317 aa15.1■□□□□ 0.01
SREBF1-220ENST00000581707 TMEM69Q5SWH9 247 aa15.1■□□□□ 0.01
SREBF1-220ENST00000581707 OVCH2Q7RTZ1 564 aa15.1■□□□□ 0.01
SREBF1-220ENST00000581707 KCTD12Q96CX2 325 aaKnown RBP15.1■□□□□ 0.01
SREBF1-220ENST00000581707 TMEM68Q96MH6 324 aa15.1■□□□□ 0.01
SREBF1-220ENST00000581707 MEIS3P1A6NDR6 274 aa15.09■□□□□ 0.01
SREBF1-220ENST00000581707 IGHV3-11P01762 117 aa15.09■□□□□ 0.01
SREBF1-220ENST00000581707 TRGV3P03979 118 aa15.09■□□□□ 0.01
SREBF1-220ENST00000581707 DGCR2P98153 550 aa15.09■□□□□ 0.01
SREBF1-220ENST00000581707 EIF4EBP1Q13541 118 aaPredicted RBP15.09■□□□□ 0.01
SREBF1-220ENST00000581707 DEFB121Q5J5C9 76 aa15.09■□□□□ 0.01
SREBF1-220ENST00000581707 MFSD4AQ8N468 514 aa15.09■□□□□ 0.01
SREBF1-220ENST00000581707 POC5Q8NA72 575 aa15.09■□□□□ 0.01
SREBF1-220ENST00000581707 OR5AP2Q8NGF4 316 aa15.09■□□□□ 0.01
SREBF1-220ENST00000581707 SECTM1Q8WVN6 248 aa15.09■□□□□ 0.01
SREBF1-220ENST00000581707 TCTEX1D2Q8WW35 142 aa15.09■□□□□ 0.01
SREBF1-220ENST00000581707 SNAPC3Q92966 411 aa15.09■□□□□ 0.01
SREBF1-220ENST00000581707 RHOVQ96L33 236 aa15.09■□□□□ 0.01
SREBF1-220ENST00000581707 IFT46Q9NQC8 304 aa15.09■□□□□ 0.01
SREBF1-220ENST00000581707 TAS2R8Q9NYW2 309 aa15.09■□□□□ 0.01
SREBF1-220ENST00000581707 MSGN1A6NI15 193 aa15.08■□□□□ 0
SREBF1-220ENST00000581707 LINC01619G3V211 115 aa15.08■□□□□ 0
SREBF1-220ENST00000581707 H3BUA1 57 aa15.08■□□□□ 0
SREBF1-220ENST00000581707 PPYP01298 95 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms