RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 OR10K2Q6IF99 312 aa9.47□□□□□ -0.89
SS18-219ENST00000581570 GPHB5Q86YW7 130 aa9.47□□□□□ -0.89
SS18-219ENST00000581570 UXS1Q8NBZ7 420 aa9.47□□□□□ -0.89
SS18-219ENST00000581570 NECAP1Q8NC96 275 aa9.47□□□□□ -0.89
SS18-219ENST00000581570 SRSF12Q8WXF0 261 aaKnown RBP9.47□□□□□ -0.89
SS18-219ENST00000581570 RIMS4Q9H426 269 aaPredicted RBP9.47□□□□□ -0.89
SS18-219ENST00000581570 MLXQ9UH92 298 aa9.47□□□□□ -0.89
SS18-219ENST00000581570 TRBV6-6A0A0A6YYG2 114 aa9.46□□□□□ -0.9
SS18-219ENST00000581570 OR2J3O76001 311 aa9.46□□□□□ -0.9
SS18-219ENST00000581570 SCTP09683 121 aa9.46□□□□□ -0.9
SS18-219ENST00000581570 DCKP27707 260 aa9.46□□□□□ -0.9
SS18-219ENST00000581570 MAP2K4P45985 399 aa9.46□□□□□ -0.9
SS18-219ENST00000581570 RPS27AP62979 156 aaKnown RBP9.46□□□□□ -0.9
SS18-219ENST00000581570 CBX3Q13185 183 aa9.46□□□□□ -0.9
SS18-219ENST00000581570 PRSS8Q16651 343 aa9.46□□□□□ -0.9
SS18-219ENST00000581570 C15orf32Q32M92 178 aa9.46□□□□□ -0.9
SS18-219ENST00000581570 TMEM177Q53S58 311 aa9.46□□□□□ -0.9
SS18-219ENST00000581570 NKAIN3Q8N8D7 197 aa9.46□□□□□ -0.9
SS18-219ENST00000581570 ZFP41Q8N8Y5 198 aa9.46□□□□□ -0.9
SS18-219ENST00000581570 TEX45Q8NA69 505 aa9.46□□□□□ -0.9
SS18-219ENST00000581570 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.46□□□□□ -0.9
SS18-219ENST00000581570 RNF183Q96D59 192 aa9.46□□□□□ -0.9
SS18-219ENST00000581570 PGLYRP3Q96LB9 341 aa9.46□□□□□ -0.9
SS18-219ENST00000581570 SLC29A1Q99808 456 aa9.46□□□□□ -0.9
SS18-219ENST00000581570 PLEKHJ1Q9NW61 149 aa9.46□□□□□ -0.9
SS18-219ENST00000581570 MGAT4AQ9UM21 535 aa9.46□□□□□ -0.9
SS18-219ENST00000581570 ZNF320A2RRD8 509 aa9.45□□□□□ -0.9
SS18-219ENST00000581570 TMEM213A2RRL7 107 aa9.45□□□□□ -0.9
SS18-219ENST00000581570 UBBP0CG47 229 aa9.45□□□□□ -0.9
SS18-219ENST00000581570 MED14OSP0DP75 135 aa9.45□□□□□ -0.9
SS18-219ENST00000581570 TAGLNQ01995 201 aaKnown RBP9.45□□□□□ -0.9
SS18-219ENST00000581570 VMA21Q3ZAQ7 101 aa9.45□□□□□ -0.9
SS18-219ENST00000581570 FAM106AQ4KMX7 169 aa9.45□□□□□ -0.9
SS18-219ENST00000581570 GLT8D1Q68CQ7 371 aa9.45□□□□□ -0.9
SS18-219ENST00000581570 TTC9CQ8N5M4 171 aa9.45□□□□□ -0.9
SS18-219ENST00000581570 STPG3Q8N7X2 389 aa9.45□□□□□ -0.9
SS18-219ENST00000581570 OR1L6Q8NGR2 347 aa9.45□□□□□ -0.9
SS18-219ENST00000581570 ACOT12Q8WYK0 555 aa9.45□□□□□ -0.9
SS18-219ENST00000581570 DERL3Q96Q80 235 aa9.45□□□□□ -0.9
SS18-219ENST00000581570 NICN1Q9BSH3 213 aa9.45□□□□□ -0.9
SS18-219ENST00000581570 HDHD3Q9BSH5 251 aaPredicted RBP9.45□□□□□ -0.9
SS18-219ENST00000581570 TMEM59Q9BXS4 323 aa9.45□□□□□ -0.9
SS18-219ENST00000581570 RDH8Q9NYR8 311 aa9.45□□□□□ -0.9
SS18-219ENST00000581570 DNAH6Q9C0G6 4158 aa9.45□□□□□ -0.9
SS18-219ENST00000581570 TRAV25A0A0B4J276 109 aa9.44□□□□□ -0.9
SS18-219ENST00000581570 IFNA4P05014 189 aa9.44□□□□□ -0.9
SS18-219ENST00000581570 MYL12AP19105 171 aa9.44□□□□□ -0.9
SS18-219ENST00000581570 UBE2KP61086 200 aa9.44□□□□□ -0.9
SS18-219ENST00000581570 SMN1Q16637 294 aaKnown RBP9.44□□□□□ -0.9
SS18-219ENST00000581570 RTL8BQ17RB0 113 aa9.44□□□□□ -0.9
SS18-219ENST00000581570 BTNL8Q6UX41 500 aa9.44□□□□□ -0.9
SS18-219ENST00000581570 IDO2Q6ZQW0 420 aa9.44□□□□□ -0.9
SS18-219ENST00000581570 RBPMS2Q6ZRY4 209 aaKnown RBP9.44□□□□□ -0.9
SS18-219ENST00000581570 SLC38A6Q8IZM9 456 aa9.44□□□□□ -0.9
SS18-219ENST00000581570 OR2C3Q8N628 320 aa9.44□□□□□ -0.9
SS18-219ENST00000581570 APH1BQ8WW43 257 aa9.44□□□□□ -0.9
SS18-219ENST00000581570 SPIN2AQ99865 258 aa9.44□□□□□ -0.9
SS18-219ENST00000581570 SPIN2BQ9BPZ2 258 aa9.44□□□□□ -0.9
SS18-219ENST00000581570 TM2D1Q9BX74 207 aa9.44□□□□□ -0.9
SS18-219ENST00000581570 Q9N2K0 584 aa9.44□□□□□ -0.9
SS18-219ENST00000581570 SDHAF2Q9NX18 166 aa9.44□□□□□ -0.9
SS18-219ENST00000581570 CLEC2DQ9UHP7 191 aa9.44□□□□□ -0.9
SS18-219ENST00000581570 AK3Q9UIJ7 227 aa9.44□□□□□ -0.9
SS18-219ENST00000581570 IGKV1-6A0A0C4DH72 117 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 KIR2DL5BA0A0G2JN68 375 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 KIR2DL5BA0A0G2JPC4 375 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 PNMA8CA0A1B0GUJ8 204 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 LOC100130705A0A1B0GUX0 176 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 ACTL6BO94805 426 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 IGHV3-23P01764 117 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 RRASP10301 218 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 ARL3P36405 182 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 OR4A47Q6IF82 309 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 CLEC19AQ6UXS0 136 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 LINC00336Q6ZUF6 198 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 SLC25A42Q86VD7 318 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 KIR2DL5AQ8N109 375 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 CBR4Q8N4T8 237 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 KIR2DL5BQ8NHK3 375 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 OR2D2Q9H210 308 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 FBXL17Q9UF56 701 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 UBQLN2Q9UHD9 624 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 FBXL7Q9UJT9 491 aa9.43□□□□□ -0.9
SS18-219ENST00000581570 A8MWP6 167 aa9.42□□□□□ -0.9
SS18-219ENST00000581570 NANOS2P60321 138 aaKnown RBP9.42□□□□□ -0.9
SS18-219ENST00000581570 UNC119Q13432 240 aa9.42□□□□□ -0.9
SS18-219ENST00000581570 TPBGQ13641 420 aa9.42□□□□□ -0.9
SS18-219ENST00000581570 RBMS2Q15434 407 aaKnown RBP9.42□□□□□ -0.9
SS18-219ENST00000581570 C2CD4CQ8TF44 421 aa9.42□□□□□ -0.9
SS18-219ENST00000581570 FBLIM1Q8WUP2 373 aa9.42□□□□□ -0.9
SS18-219ENST00000581570 PYDC1Q8WXC3 89 aa9.42□□□□□ -0.9
SS18-219ENST00000581570 GGHQ92820 318 aa9.42□□□□□ -0.9
SS18-219ENST00000581570 MFFQ9GZY8 342 aa9.42□□□□□ -0.9
SS18-219ENST00000581570 ZNF430Q9H8G1 570 aaPredicted RBP9.42□□□□□ -0.9
SS18-219ENST00000581570 DIMT1Q9UNQ2 313 aaKnown RBP9.42□□□□□ -0.9
SS18-219ENST00000581570 S4R3C0 116 aa9.42□□□□□ -0.9
SS18-219ENST00000581570 A0A0A6YYD4 124 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 IRGMA1A4Y4 181 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 TRDCB7Z8K6 153 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 SOCS1O15524 211 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms