RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 IGHV1-3A0A0C4DH29 117 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 A0A1W2PPI3 338 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 IGSF23A1L1A6 192 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 FAM24AA6NFZ4 105 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 MARCH11A6NNE9 402 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 H3BP45 60 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 H7C2Y5 167 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 TIMM23O14925 209 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 FOXH1O75593 365 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 TOX4O94842 621 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 OR2F2O95006 317 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 CFDP00746 253 aaPredicted RBP4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 IGLV2-23P01705 113 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 RBP4P02753 201 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 SAA1P0DJI8 122 aaPredicted RBP4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 IGHV4-31P0DP07 118 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 IGHV4-38-2P0DP08 117 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 SLC25A4P12235 298 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 VDAC1P21796 283 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 PSMB6P28072 239 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 ZNF137PP52743 207 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 PAX9P55771 341 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 PAX8Q06710 450 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 HNF4GQ14541 408 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 SMCO1Q147U7 214 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 C10orf55Q5SWW7 151 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 THOC7Q6I9Y2 204 aaKnown RBP4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 PRSS54Q6PEW0 395 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 MOB3BQ86TA1 216 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 TGIF2LXQ8IUE1 241 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 PIP4P2Q8N4L2 257 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 C8orf31Q8N9H6 132 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 BEND2Q8NDZ0 799 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 OR11H6Q8NGC7 330 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 OR5AN1Q8NGI8 311 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 OR4S2Q8NH73 311 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 ZDHHC16Q969W1 377 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 REG4Q9BYZ8 158 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 SMIM3Q9BZL3 60 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 HEXA-AS1Q9H8Q6 139 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 WFDC1Q9HC57 220 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 TMEM140Q9NV12 185 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 TNFSF18Q9UNG2 199 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 PRELID3BQ9Y3B1 194 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 TMED3Q9Y3Q3 217 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 MMP24Q9Y5R2 645 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 KPTNQ9Y664 436 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 POMT1Q9Y6A1 747 aa4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 CHD3Q12873 2000 aaKnown RBP4.96□□□□□ -1.62
RNU4ATAC-201ENST00000580972 DYSFO75923 2080 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 AKAP6Q13023 2319 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 TRAV40A0A0B4J280 105 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 CENPVL3A0A0U1RRI6 287 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 A0A1B0GU03 582 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 MDFIC2A0A1B0GVS7 189 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 DUXBA0A1W2PPF3 345 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 A0A1W2PPH5 198 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 L7N2F9 121 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 WRBO00258 174 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 SMAD7O15105 426 aaKnown RBP4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 ST8SIA3O43173 380 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 RBFOX2O43251 390 aaKnown RBP eCLIP4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 DEDDO75618 318 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 HPRT1P00492 218 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 APOA2P02652 100 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 OPN1MWP04001 364 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 MSMBP08118 114 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 OPN1MW2P0DN77 364 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 OPN1MW3P0DN78 364 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 HKR1P10072 659 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 LYL1P12980 280 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 SLC25A16P16260 332 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 SAA4P35542 130 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 KIR2DS2P43631 304 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 NKX2-1P43699 371 aaPredicted RBP4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 RAB13P51153 203 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 PRRX1P54821 245 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 DSCR9P59020 149 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 RELBQ01201 579 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 TMEM267Q0VDI3 215 aaPredicted RBP4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 PJVKQ0ZLH3 352 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 SSX2Q16385 188 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 MRGPRG-AS1Q2M3A8 158 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 KLF17Q5JT82 389 aaPredicted RBP4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 OR4A47Q6IF82 309 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 BRD3OSQ6XYD6 125 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 C19orf35Q6ZS72 473 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 TMUB2Q71RG4 321 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 H2BFWTQ7Z2G1 175 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 ZNF546Q86UE3 836 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 HAPLN4Q86UW8 402 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 THAP6Q8TBB0 222 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 CFHR4Q92496 578 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 LSM10Q969L4 123 aaKnown RBP4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 RPEQ96AT9 228 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 MBD6Q96DN6 1003 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 HYLS1Q96M11 299 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 HARBI1Q96MB7 349 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 OR4C12Q96R67 309 aa4.95□□□□□ -1.62
RNU4ATAC-201ENST00000580972 CLCC1Q96S66 551 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms