RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 WFDC6Q9BQY6 131 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 WSB1Q9Y6I7 421 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 MARCH11A6NNE9 402 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 TMEM14DPA8MWL7 114 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 RCC1P18754 421 aaPredicted RBP8.64□□□□□ -1.03
MSI2-209ENST00000579483 EFNB2P52799 333 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 NCMAPQ5T1S8 102 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 MARVELD3Q96A59 401 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 TMEM133Q9H2Q1 129 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 PLSCR3Q9NRY6 295 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 CELA3BP08861 270 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 GCSHP23434 173 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 COL8A1P27658 744 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 SERF2P84101 59 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 DPPA3Q6W0C5 159 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 FGFRL1Q8N441 504 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 TXNDC17Q9BRA2 123 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 LYRM2Q9NU23 88 aaPredicted RBP8.64□□□□□ -1.03
MSI2-209ENST00000579483 TCF20Q9UGU0 1960 aaKnown RBP8.64□□□□□ -1.03
MSI2-209ENST00000579483 CTXND1A0A1B0GTU2 59 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 AP4M1O00189 453 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 OR2J3O76001 311 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 P01737 135 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 WNT2P09544 360 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 NPBWR2P48146 333 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 RND2P52198 227 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 HLA-DRB5Q30154 266 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 UQCC3Q6UW78 93 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 RFLNBQ8N5W9 214 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 MRPL30Q8TCC3 161 aaKnown RBP8.64□□□□□ -1.03
MSI2-209ENST00000579483 ARPC1AQ92747 370 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 SLC25A33Q9BSK2 321 aa8.64□□□□□ -1.03
MSI2-209ENST00000579483 ZNHIT1O43257 154 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 SCGB1D1O95968 90 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 IGHV1-46P01743 117 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 OR10J1P30954 320 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 ANKRD36A6QL64 1941 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 MFSD2BA6NFX1 497 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 PDE6DO43924 150 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 EWSR1Q01844 656 aaKnown RBP eCLIP8.63□□□□□ -1.03
MSI2-209ENST00000579483 GUK1Q16774 197 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 MINOS1Q5TGZ0 78 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 WDR73Q6P4I2 378 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 C19orf35Q6ZS72 473 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 CADM3Q8N126 398 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 UFC1Q9Y3C8 167 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 SIRT4Q9Y6E7 314 aaPredicted RBP8.63□□□□□ -1.03
MSI2-209ENST00000579483 MINOS1-NBL1R4GNA1 71 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 CHD5Q8TDI0 1954 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 LMX1BO60663 402 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 LINC00869P0C866 280 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 PI4KAP42356 2102 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 TANC1Q9C0D5 1861 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 CCDC88CQ9P219 2028 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 RCC2Q9P258 522 aaKnown RBP8.63□□□□□ -1.03
MSI2-209ENST00000579483 IGHV3-21A0A0B4J1V1 117 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 A0A1W2PP11 408 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 MST1P26927 711 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 SSTR5P35346 364 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 AMTP48728 403 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 DLX6P56179 175 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 CHAC2Q8WUX2 184 aa8.63□□□□□ -1.03
MSI2-209ENST00000579483 ZSWIM8A7E2V4 1837 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 PQLC2LA1A4F0 135 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 C12orf77C9JDV5 145 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 SIGLEC5O15389 551 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 CRYBA2P53672 197 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 PQLC2Q6ZP29 291 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 TM2D1Q9BX74 207 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 ZNF586Q9NXT0 402 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 ELOA3CA0A087WX78 387 aaPredicted RBP8.62□□□□□ -1.03
MSI2-209ENST00000579483 TCRBV4S1A1TA0A5B7 111 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 A6NNC1 897 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 DEDDO75618 318 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 MEOX2P50222 304 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 ZNF137PP52743 207 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 GTF3AQ92664 365 aaKnown RBP8.62□□□□□ -1.03
MSI2-209ENST00000579483 SLC2A8Q9NY64 477 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 CRIM1Q9NZV1 1036 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 TCF19Q9Y242 345 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 NBR2O15453 112 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 C3orf36Q3SXR2 165 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 ZNF429Q86V71 674 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 OR4B1Q8NGF8 309 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 URGCP-MRPS24S4R325 110 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 COL6A6A6NMZ7 2263 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 ZP3P21754 424 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 CD200R1LQ6Q8B3 271 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 RNF114Q9Y508 228 aa8.62□□□□□ -1.03
MSI2-209ENST00000579483 GREB1Q4ZG55 1949 aa8.61□□□□□ -1.03
MSI2-209ENST00000579483 LY6G6EA0A0G2JKS1 128 aa8.61□□□□□ -1.03
MSI2-209ENST00000579483 FAM181BA6NEQ2 426 aa8.61□□□□□ -1.03
MSI2-209ENST00000579483 PNRC1Q12796 327 aaPredicted RBP8.61□□□□□ -1.03
MSI2-209ENST00000579483 SRSF6Q13247 344 aaKnown RBP8.61□□□□□ -1.03
MSI2-209ENST00000579483 RNF212Q495C1 297 aa8.61□□□□□ -1.03
MSI2-209ENST00000579483 FAM74A3Q4VXF1 159 aa8.61□□□□□ -1.03
MSI2-209ENST00000579483 U3KQA8 63 aa8.61□□□□□ -1.03
MSI2-209ENST00000579483 TRAV40A0A0B4J280 105 aa8.61□□□□□ -1.03
MSI2-209ENST00000579483 TSTD3H0UI37 97 aa8.61□□□□□ -1.03
MSI2-209ENST00000579483 H0Y8G0 127 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms