RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 NIPBLQ6KC79 2804 aaeCLIP11.09□□□□□ -0.63
LINC01543-201ENST00000578367 IGHV3-72A0A0B4J1Y9 119 aa11.09□□□□□ -0.63
LINC01543-201ENST00000578367 GPR137BO60478 399 aa11.09□□□□□ -0.63
LINC01543-201ENST00000578367 NDUFA3O95167 84 aa11.09□□□□□ -0.63
LINC01543-201ENST00000578367 HPRT1P00492 218 aa11.09□□□□□ -0.63
LINC01543-201ENST00000578367 PAX6P26367 422 aa11.09□□□□□ -0.63
LINC01543-201ENST00000578367 PIGPP57054 158 aa11.09□□□□□ -0.63
LINC01543-201ENST00000578367 RIPPLY3P57055 190 aa11.09□□□□□ -0.63
LINC01543-201ENST00000578367 TAS2R31P59538 309 aa11.09□□□□□ -0.63
LINC01543-201ENST00000578367 RPL30P62888 115 aaKnown RBP11.09□□□□□ -0.63
LINC01543-201ENST00000578367 SPAG16Q8N0X2 631 aa11.09□□□□□ -0.63
LINC01543-201ENST00000578367 RTBDNQ9BSG5 229 aaPredicted RBP11.09□□□□□ -0.63
LINC01543-201ENST00000578367 SLC25A33Q9BSK2 321 aa11.09□□□□□ -0.63
LINC01543-201ENST00000578367 NPFFR1Q9GZQ6 430 aa11.09□□□□□ -0.63
LINC01543-201ENST00000578367 C5orf66Q9H5L9 145 aa11.09□□□□□ -0.63
LINC01543-201ENST00000578367 COMMD9Q9P000 198 aa11.09□□□□□ -0.63
LINC01543-201ENST00000578367 KIAA1456Q9P272 454 aa11.09□□□□□ -0.63
LINC01543-201ENST00000578367 TBC1D24Q9ULP9 559 aa11.09□□□□□ -0.63
LINC01543-201ENST00000578367 KCNIP3Q9Y2W7 256 aa11.09□□□□□ -0.63
LINC01543-201ENST00000578367 H0Y980 276 aa11.08□□□□□ -0.64
LINC01543-201ENST00000578367 FCGR3BO75015 233 aa11.08□□□□□ -0.64
LINC01543-201ENST00000578367 ATG12O94817 140 aa11.08□□□□□ -0.64
LINC01543-201ENST00000578367 HRASP01112 189 aa11.08□□□□□ -0.64
LINC01543-201ENST00000578367 RLN1P04808 185 aa11.08□□□□□ -0.64
LINC01543-201ENST00000578367 CRYBA1P05813 215 aa11.08□□□□□ -0.64
LINC01543-201ENST00000578367 FGF2P09038 288 aa11.08□□□□□ -0.64
LINC01543-201ENST00000578367 BTCP35070 178 aa11.08□□□□□ -0.64
LINC01543-201ENST00000578367 RPS16P62249 146 aaKnown RBP11.08□□□□□ -0.64
LINC01543-201ENST00000578367 DHODHQ02127 395 aa11.08□□□□□ -0.64
LINC01543-201ENST00000578367 PHLDA2Q53GA4 152 aa11.08□□□□□ -0.64
LINC01543-201ENST00000578367 TMEM128Q5BJH2 165 aa11.08□□□□□ -0.64
LINC01543-201ENST00000578367 CCBE1Q6UXH8 406 aaPredicted RBP11.08□□□□□ -0.64
LINC01543-201ENST00000578367 GLDNQ6ZMI3 551 aaPredicted RBP11.08□□□□□ -0.64
LINC01543-201ENST00000578367 TBC1D26Q86UD7 250 aa11.08□□□□□ -0.64
LINC01543-201ENST00000578367 VSTM2AQ8TAG5 236 aa11.08□□□□□ -0.64
LINC01543-201ENST00000578367 GALNT14Q96FL9 552 aa11.08□□□□□ -0.64
LINC01543-201ENST00000578367 ALX4Q9H161 411 aaPredicted RBP11.08□□□□□ -0.64
LINC01543-201ENST00000578367 PLSCR3Q9NRY6 295 aa11.08□□□□□ -0.64
LINC01543-201ENST00000578367 C3orf85A0A1B0GTC6 90 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 LINC00854A0A1B0GVQ3 168 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 FAM240BA0A1B0GVZ2 78 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 CRYM-AS1A6NIL9 109 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 NBR2O15453 112 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 TNFSF12O43508 249 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 CREBL2O60519 120 aaPredicted RBP11.07□□□□□ -0.64
LINC01543-201ENST00000578367 NDUFA7O95182 113 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 IGKV1-16P04430 117 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 ANXA3P12429 323 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 CD24P25063 80 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 IFITM3Q01628 133 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 MMDQ15546 238 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 LY6EQ16553 131 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 POU2AF1Q16633 256 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 SGPP2Q8IWX5 399 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 CENPSQ8N2Z9 138 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 FAM71E2Q8N5Q1 922 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 TEX45Q8NA69 505 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 DUSP18Q8NEJ0 188 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 OR51H1Q8NH63 302 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 NAA60Q9H7X0 242 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 VSIG4Q9Y279 399 aa11.07□□□□□ -0.64
LINC01543-201ENST00000578367 TEX13DA0A0J9YY54 714 aaPredicted RBP11.06□□□□□ -0.64
LINC01543-201ENST00000578367 A0A1B0GUS0 222 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 RRHO14718 337 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 SHOXO15266 292 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 TSPAN9O75954 239 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 CRYZL1O95825 349 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 TCRBP04435 133 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 SERPINE2P07093 398 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 NQO2P16083 231 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 CCR6P51684 374 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 BRWD1-AS2P59051 145 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 UBE2KP61086 200 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 SRPXP78539 464 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 DCTN2Q13561 401 aaKnown RBP11.06□□□□□ -0.64
LINC01543-201ENST00000578367 HNF4GQ14541 408 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 VMA21Q3ZAQ7 101 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 SLC25A42Q86VD7 318 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 Q8N2B8 174 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 HARBI1Q96MB7 349 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 PRSS22Q9GZN4 317 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 NUBP2Q9Y5Y2 271 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 JMJD1CQ15652 2540 aa11.06□□□□□ -0.64
LINC01543-201ENST00000578367 FAM181BA6NEQ2 426 aa11.05□□□□□ -0.64
LINC01543-201ENST00000578367 NCBP2LA6PVI3 153 aaKnown RBP11.05□□□□□ -0.64
LINC01543-201ENST00000578367 CHST1O43916 411 aa11.05□□□□□ -0.64
LINC01543-201ENST00000578367 PI3P19957 117 aa11.05□□□□□ -0.64
LINC01543-201ENST00000578367 UCP1P25874 307 aa11.05□□□□□ -0.64
LINC01543-201ENST00000578367 MECP2P51608 486 aaKnown RBP11.05□□□□□ -0.64
LINC01543-201ENST00000578367 RAG2P55895 527 aa11.05□□□□□ -0.64
LINC01543-201ENST00000578367 LINC00205P59089 165 aa11.05□□□□□ -0.64
LINC01543-201ENST00000578367 PSG5Q15238 335 aa11.05□□□□□ -0.64
LINC01543-201ENST00000578367 C5orf64Q2M2E5 130 aa11.05□□□□□ -0.64
LINC01543-201ENST00000578367 TMEM219Q86XT9 240 aa11.05□□□□□ -0.64
LINC01543-201ENST00000578367 C5orf56Q8N8D9 126 aa11.05□□□□□ -0.64
LINC01543-201ENST00000578367 Q8N9W7 124 aa11.05□□□□□ -0.64
LINC01543-201ENST00000578367 OR4A5Q8NH83 315 aa11.05□□□□□ -0.64
LINC01543-201ENST00000578367 ENKURQ8TC29 256 aa11.05□□□□□ -0.64
LINC01543-201ENST00000578367 IL22RA2Q969J5 263 aa11.05□□□□□ -0.64
LINC01543-201ENST00000578367 RASL11BQ9BPW5 248 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms