RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 IGLV2-14P01704 120 aa10.66□□□□□ -0.7
CIITA-210ENST00000575513 PPIFP30405 207 aaKnown RBP10.66□□□□□ -0.7
CIITA-210ENST00000575513 FCGR2CP31995 323 aa10.66□□□□□ -0.7
CIITA-210ENST00000575513 RPL23AP62750 156 aaKnown RBP10.66□□□□□ -0.7
CIITA-210ENST00000575513 CX3CL1P78423 397 aa10.66□□□□□ -0.7
CIITA-210ENST00000575513 SSBP1Q04837 148 aaKnown RBP10.66□□□□□ -0.7
CIITA-210ENST00000575513 PLGLAQ15195 96 aa10.66□□□□□ -0.7
CIITA-210ENST00000575513 CXorf66Q5JRM2 361 aaPredicted RBP10.66□□□□□ -0.7
CIITA-210ENST00000575513 OVCH2Q7RTZ1 564 aa10.66□□□□□ -0.7
CIITA-210ENST00000575513 TCTEX1D1Q8N7M0 179 aa10.66□□□□□ -0.7
CIITA-210ENST00000575513 ZBTB34Q8NCN2 500 aa10.66□□□□□ -0.7
CIITA-210ENST00000575513 WFDC9Q8NEX5 89 aa10.66□□□□□ -0.7
CIITA-210ENST00000575513 OR52I2Q8NH67 350 aa10.66□□□□□ -0.7
CIITA-210ENST00000575513 HSD17B10Q99714 261 aaKnown RBP10.66□□□□□ -0.7
CIITA-210ENST00000575513 FBXL15Q9H469 300 aa10.66□□□□□ -0.7
CIITA-210ENST00000575513 METTL1Q9UBP6 276 aaKnown RBP10.66□□□□□ -0.7
CIITA-210ENST00000575513 MTFP1Q9UDX5 166 aa10.66□□□□□ -0.7
CIITA-210ENST00000575513 RBMX2Q9Y388 322 aaKnown RBP10.66□□□□□ -0.7
CIITA-210ENST00000575513 IGKV1D-13A0A0B4J2D9 117 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 LINC00473A8K010 186 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 FCN1O00602 326 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 PPYP01298 95 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 IGLV2-23P01705 113 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 FCER2P06734 321 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 CRYGBP07316 175 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 IGKV1-13P0DP09 117 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 PSMB8P28062 276 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 S100A5P33763 92 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 TMEM267Q0VDI3 215 aaPredicted RBP10.65□□□□□ -0.7
CIITA-210ENST00000575513 EIF4EBP1Q13541 118 aaPredicted RBP10.65□□□□□ -0.7
CIITA-210ENST00000575513 DYRK1AQ13627 763 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 ACTBL2Q562R1 376 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 ZNF66Q6ZN08 573 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 PPP1R27Q86WC6 154 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 MINDY2Q8NBR6 621 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 BVESQ8NE79 360 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 OR5H2Q8NGV7 314 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 OSR1Q8TAX0 266 aaPredicted RBP10.65□□□□□ -0.7
CIITA-210ENST00000575513 SMIM4Q8WVI0 70 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 FCAMRQ8WWV6 532 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 BORCS5Q969J3 196 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 PRELID3BQ9Y3B1 194 aa10.65□□□□□ -0.7
CIITA-210ENST00000575513 TRAV41A0A0B4J266 112 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 FABP12A6NFH5 140 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 SHOXO15266 292 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 ATP6V0E1O15342 81 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 GSTZ1O43708 216 aaPredicted RBP10.64□□□□□ -0.71
CIITA-210ENST00000575513 IGLV1-40P01703 118 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 PF4V1P10720 104 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 TBPP20226 339 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 AADACP22760 399 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 PTBP1P26599 531 aaKnown RBP eCLIP10.64□□□□□ -0.71
CIITA-210ENST00000575513 CDX1P47902 265 aaPredicted RBP10.64□□□□□ -0.71
CIITA-210ENST00000575513 IL18Q14116 193 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 AKIRIN2Q53H80 203 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 C19orf54Q5BKX5 351 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 VAX1Q5SQQ9 334 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 CCDC190Q86UF4 302 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 TEX45Q8NA69 505 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 OR6Q1Q8NGQ2 317 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 HARBI1Q96MB7 349 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 PARP11Q9NR21 331 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 EHFQ9NZC4 300 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 KLK11Q9UBX7 282 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 NUBP2Q9Y5Y2 271 aa10.64□□□□□ -0.71
CIITA-210ENST00000575513 A0A1W2PRX2 142 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 SRRM4A7MD48 611 aaKnown RBP10.63□□□□□ -0.71
CIITA-210ENST00000575513 J3QRK9 145 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 SLC25A17O43808 307 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 PMP2P02689 132 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 HLA-DMAP28067 261 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 HRH1P35367 487 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 ETV6P41212 452 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 RFX2P48378 723 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 UBE2KP61086 200 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 DGCR2P98153 550 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 KHDC1LQ5JSQ8 128 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 KCTD9Q7L273 389 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 ZNF695Q8IW36 515 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 MFSD4AQ8N468 514 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 MYOZ3Q8TDC0 251 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 TMEM68Q96MH6 324 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 BATF3Q9NR55 127 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 WSB1Q9Y6I7 421 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 MEGF8Q7Z7M0 2845 aa10.63□□□□□ -0.71
CIITA-210ENST00000575513 NOTCH1P46531 2555 aa10.62□□□□□ -0.71
CIITA-210ENST00000575513 G3V318 75 aa10.62□□□□□ -0.71
CIITA-210ENST00000575513 CRYZL1O95825 349 aa10.62□□□□□ -0.71
CIITA-210ENST00000575513 CD74P04233 296 aa10.62□□□□□ -0.71
CIITA-210ENST00000575513 RPLP1P05386 114 aaKnown RBP10.62□□□□□ -0.71
CIITA-210ENST00000575513 EGR2P11161 476 aaPredicted RBP10.62□□□□□ -0.71
CIITA-210ENST00000575513 MYCNOSP40205 109 aa10.62□□□□□ -0.71
CIITA-210ENST00000575513 KIR2DS2P43631 304 aa10.62□□□□□ -0.71
CIITA-210ENST00000575513 RPL30P62888 115 aaKnown RBP10.62□□□□□ -0.71
CIITA-210ENST00000575513 NDPQ00604 133 aa10.62□□□□□ -0.71
CIITA-210ENST00000575513 VMA21Q3ZAQ7 101 aa10.62□□□□□ -0.71
CIITA-210ENST00000575513 RNASE12Q5GAN4 147 aaKnown RBP10.62□□□□□ -0.71
CIITA-210ENST00000575513 TMEM65Q6PI78 240 aa10.62□□□□□ -0.71
CIITA-210ENST00000575513 TMEM229BQ8NBD8 167 aa10.62□□□□□ -0.71
CIITA-210ENST00000575513 OR6F1Q8NGZ6 308 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms