RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 ZNF66Q6ZN08 573 aa12.9□□□□□ -0.34
PFN1-203ENST00000574872 LHFPL1Q86WI0 220 aa12.9□□□□□ -0.34
PFN1-203ENST00000574872 ZBTB34Q8NCN2 500 aa12.9□□□□□ -0.34
PFN1-203ENST00000574872 OR51H1Q8NH63 302 aa12.9□□□□□ -0.34
PFN1-203ENST00000574872 HARBI1Q96MB7 349 aa12.9□□□□□ -0.34
PFN1-203ENST00000574872 FBXL15Q9H469 300 aa12.9□□□□□ -0.34
PFN1-203ENST00000574872 LIN7CQ9NUP9 197 aaKnown RBP12.9□□□□□ -0.34
PFN1-203ENST00000574872 MCUBQ9NWR8 336 aa12.9□□□□□ -0.34
PFN1-203ENST00000574872 GPR31O00270 319 aa12.89□□□□□ -0.35
PFN1-203ENST00000574872 RRHO14718 337 aa12.89□□□□□ -0.35
PFN1-203ENST00000574872 SHOXO15266 292 aa12.89□□□□□ -0.35
PFN1-203ENST00000574872 VSIG10L2P0DP72 767 aa12.89□□□□□ -0.35
PFN1-203ENST00000574872 RRASP10301 218 aa12.89□□□□□ -0.35
PFN1-203ENST00000574872 PI3P19957 117 aa12.89□□□□□ -0.35
PFN1-203ENST00000574872 PROK1P58294 105 aa12.89□□□□□ -0.35
PFN1-203ENST00000574872 TAGLNQ01995 201 aaKnown RBP12.89□□□□□ -0.35
PFN1-203ENST00000574872 KLF9Q13886 244 aaPredicted RBP12.89□□□□□ -0.35
PFN1-203ENST00000574872 PLGLAQ15195 96 aa12.89□□□□□ -0.35
PFN1-203ENST00000574872 BAK1Q16611 211 aa12.89□□□□□ -0.35
PFN1-203ENST00000574872 C5orf64Q2M2E5 130 aa12.89□□□□□ -0.35
PFN1-203ENST00000574872 TOMM5Q8N4H5 51 aa12.89□□□□□ -0.35
PFN1-203ENST00000574872 C3orf56Q8N813 242 aa12.89□□□□□ -0.35
PFN1-203ENST00000574872 NPBQ8NG41 125 aa12.89□□□□□ -0.35
PFN1-203ENST00000574872 TSNAXQ99598 290 aaKnown RBP12.89□□□□□ -0.35
PFN1-203ENST00000574872 SDHCQ99643 169 aaPredicted RBP12.89□□□□□ -0.35
PFN1-203ENST00000574872 HSPB9Q9BQS6 159 aa12.89□□□□□ -0.35
PFN1-203ENST00000574872 SERTAD4Q9NUC0 356 aa12.89□□□□□ -0.35
PFN1-203ENST00000574872 LINC01548A6NM66 108 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 SRRM4A7MD48 611 aaKnown RBP12.88□□□□□ -0.35
PFN1-203ENST00000574872 SLC25A17O43808 307 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 NDUFA3O95167 84 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 SRSF4Q08170 494 aaKnown RBP12.88□□□□□ -0.35
PFN1-203ENST00000574872 CATR1Q13166 79 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 PSG5Q15238 335 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 TMEM177Q53S58 311 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 TRIQKQ629K1 86 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 ZNF57Q68EA5 555 aaPredicted RBP12.88□□□□□ -0.35
PFN1-203ENST00000574872 SLC35E3Q7Z769 313 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 CMTM1Q8IZ96 169 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 SLC38A6Q8IZM9 456 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 KLHDC1Q8N7A1 406 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 GDPD1Q8N9F7 314 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 OR51S1Q8NGJ8 323 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 TERB2Q8NHR7 220 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 WFDC12Q8WWY7 111 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 BORCS5Q969J3 196 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 CLCC1Q96S66 551 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 RNF5Q99942 180 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 RSRP1Q9BUV0 290 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 AKIP1Q9NQ31 210 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 TPSG1Q9NRR2 321 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 METTL1Q9UBP6 276 aaKnown RBP12.88□□□□□ -0.35
PFN1-203ENST00000574872 LINC00527Q9UJ94 153 aa12.88□□□□□ -0.35
PFN1-203ENST00000574872 RAMP3O60896 148 aa12.87□□□□□ -0.35
PFN1-203ENST00000574872 PGLYRP1O75594 196 aaPredicted RBP12.87□□□□□ -0.35
PFN1-203ENST00000574872 IGLV2-23P01705 113 aa12.87□□□□□ -0.35
PFN1-203ENST00000574872 INPP1P49441 399 aa12.87□□□□□ -0.35
PFN1-203ENST00000574872 UCP3P55916 312 aa12.87□□□□□ -0.35
PFN1-203ENST00000574872 BRWD1-AS2P59051 145 aa12.87□□□□□ -0.35
PFN1-203ENST00000574872 AP3S2P59780 193 aa12.87□□□□□ -0.35
PFN1-203ENST00000574872 KRTAP10-3P60369 221 aa12.87□□□□□ -0.35
PFN1-203ENST00000574872 ZNF45Q02386 682 aa12.87□□□□□ -0.35
PFN1-203ENST00000574872 LPCAT3Q6P1A2 487 aa12.87□□□□□ -0.35
PFN1-203ENST00000574872 SPAG16Q8N0X2 631 aa12.87□□□□□ -0.35
PFN1-203ENST00000574872 OR13C8Q8NGS7 320 aa12.87□□□□□ -0.35
PFN1-203ENST00000574872 OR4S2Q8NH73 311 aa12.87□□□□□ -0.35
PFN1-203ENST00000574872 MARCH1Q8TCQ1 289 aa12.87□□□□□ -0.35
PFN1-203ENST00000574872 MRGPRFQ96AM1 343 aa12.87□□□□□ -0.35
PFN1-203ENST00000574872 NOL4LQ96MY1 436 aaPredicted RBP12.87□□□□□ -0.35
PFN1-203ENST00000574872 HRASLSQ9HDD0 168 aa12.87□□□□□ -0.35
PFN1-203ENST00000574872 ANK2Q01484 3957 aa12.87□□□□□ -0.35
PFN1-203ENST00000574872 LINC00854A0A1B0GVQ3 168 aa12.86□□□□□ -0.35
PFN1-203ENST00000574872 FCN1O00602 326 aa12.86□□□□□ -0.35
PFN1-203ENST00000574872 SPDEFO95238 335 aa12.86□□□□□ -0.35
PFN1-203ENST00000574872 IGHG2P01859 326 aa12.86□□□□□ -0.35
PFN1-203ENST00000574872 S100GP29377 79 aa12.86□□□□□ -0.35
PFN1-203ENST00000574872 KIR2DS2P43631 304 aa12.86□□□□□ -0.35
PFN1-203ENST00000574872 LGALS7P47929 136 aa12.86□□□□□ -0.35
PFN1-203ENST00000574872 HIST2H2BDQ6DRA6 164 aa12.86□□□□□ -0.35
PFN1-203ENST00000574872 LIN54Q6MZP7 749 aa12.86□□□□□ -0.35
PFN1-203ENST00000574872 IDO2Q6ZQW0 420 aa12.86□□□□□ -0.35
PFN1-203ENST00000574872 VKORC1L1Q8N0U8 176 aa12.86□□□□□ -0.35
PFN1-203ENST00000574872 SPATA3Q8NHX4 192 aa12.86□□□□□ -0.35
PFN1-203ENST00000574872 PRRT1Q99946 306 aa12.86□□□□□ -0.35
PFN1-203ENST00000574872 SLC2A9Q9NRM0 540 aa12.86□□□□□ -0.35
PFN1-203ENST00000574872 HLA-DRB1P01911 266 aa12.85□□□□□ -0.35
PFN1-203ENST00000574872 FAUP35544 74 aaKnown RBP12.85□□□□□ -0.35
PFN1-203ENST00000574872 TBC1D26Q86UD7 250 aa12.85□□□□□ -0.35
PFN1-203ENST00000574872 C11orf44Q8N8P7 122 aa12.85□□□□□ -0.35
PFN1-203ENST00000574872 POC5Q8NA72 575 aa12.85□□□□□ -0.35
PFN1-203ENST00000574872 OSR1Q8TAX0 266 aaPredicted RBP12.85□□□□□ -0.35
PFN1-203ENST00000574872 ZNF747Q9BV97 191 aa12.85□□□□□ -0.35
PFN1-203ENST00000574872 PARP11Q9NR21 331 aa12.85□□□□□ -0.35
PFN1-203ENST00000574872 SCP2D1Q9UJQ7 156 aa12.85□□□□□ -0.35
PFN1-203ENST00000574872 IGHV7-81A0A0B4J1V7 117 aa12.84□□□□□ -0.35
PFN1-203ENST00000574872 PLXNB1O43157 2135 aa12.84□□□□□ -0.35
PFN1-203ENST00000574872 KCNAB3O43448 404 aa12.84□□□□□ -0.35
PFN1-203ENST00000574872 CA2P00918 260 aa12.84□□□□□ -0.35
PFN1-203ENST00000574872 SAA1P0DJI8 122 aaPredicted RBP12.84□□□□□ -0.35
PFN1-203ENST00000574872 IL7P13232 177 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms