RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 GPR157Q5UAW9 335 aa19.44■□□□□ 0.7
ATPAF1-213ENST00000574428 BRD3OSQ6XYD6 125 aa19.44■□□□□ 0.7
ATPAF1-213ENST00000574428 PRELID3BQ9Y3B1 194 aa19.44■□□□□ 0.7
ATPAF1-213ENST00000574428 HSPB11Q9Y547 144 aa19.44■□□□□ 0.7
ATPAF1-213ENST00000574428 MINOS1-NBL1R4GNA1 71 aa19.44■□□□□ 0.7
ATPAF1-213ENST00000574428 CELSR1Q9NYQ6 3014 aa19.44■□□□□ 0.7
ATPAF1-213ENST00000574428 B3GALNT1O75752 331 aa19.43■□□□□ 0.7
ATPAF1-213ENST00000574428 SSX2Q16385 188 aa19.43■□□□□ 0.7
ATPAF1-213ENST00000574428 MIDNQ504T8 468 aa19.43■□□□□ 0.7
ATPAF1-213ENST00000574428 DYNAPQ8N1N2 210 aa19.43■□□□□ 0.7
ATPAF1-213ENST00000574428 PAIP2BQ9ULR5 123 aaKnown RBP19.43■□□□□ 0.7
ATPAF1-213ENST00000574428 TBL2Q9Y4P3 447 aaKnown RBP19.43■□□□□ 0.7
ATPAF1-213ENST00000574428 TEX15Q9BXT5 2789 aa19.43■□□□□ 0.7
ATPAF1-213ENST00000574428 ABCA1O95477 2261 aa19.42■□□□□ 0.7
ATPAF1-213ENST00000574428 IGHV1-3A0A0C4DH29 117 aa19.42■□□□□ 0.7
ATPAF1-213ENST00000574428 KRTAP1-1Q07627 177 aa19.42■□□□□ 0.7
ATPAF1-213ENST00000574428 TMEM268Q5VZI3 342 aa19.42■□□□□ 0.7
ATPAF1-213ENST00000574428 LGI3Q8N145 548 aa19.42■□□□□ 0.7
ATPAF1-213ENST00000574428 OR5M8Q8NGP6 311 aa19.42■□□□□ 0.7
ATPAF1-213ENST00000574428 AJUBAQ96IF1 538 aa19.42■□□□□ 0.7
ATPAF1-213ENST00000574428 A0A0B4J2A0 478 aa19.42■□□□□ 0.7
ATPAF1-213ENST00000574428 A0A1W2PPI3 338 aa19.42■□□□□ 0.7
ATPAF1-213ENST00000574428 H0YJW9 148 aa19.42■□□□□ 0.7
ATPAF1-213ENST00000574428 CDS2O95674 445 aa19.42■□□□□ 0.7
ATPAF1-213ENST00000574428 LPAR6P43657 344 aa19.42■□□□□ 0.7
ATPAF1-213ENST00000574428 MOB3BQ86TA1 216 aa19.42■□□□□ 0.7
ATPAF1-213ENST00000574428 TMEM56Q96MV1 263 aa19.42■□□□□ 0.7
ATPAF1-213ENST00000574428 SHPKQ9UHJ6 478 aa19.42■□□□□ 0.7
ATPAF1-213ENST00000574428 TMEM56-RWDD3S4R434 201 aa19.42■□□□□ 0.7
ATPAF1-213ENST00000574428 IGHV3-72A0A0B4J1Y9 119 aa19.41■□□□□ 0.7
ATPAF1-213ENST00000574428 ADAP1O75689 374 aa19.41■□□□□ 0.7
ATPAF1-213ENST00000574428 S1PR2O95136 353 aa19.41■□□□□ 0.7
ATPAF1-213ENST00000574428 IGKV1-39P01597 117 aa19.41■□□□□ 0.7
ATPAF1-213ENST00000574428 IGKV1D-39P04432 117 aa19.41■□□□□ 0.7
ATPAF1-213ENST00000574428 EPHA1P21709 976 aa19.41■□□□□ 0.7
ATPAF1-213ENST00000574428 SRPXP78539 464 aa19.41■□□□□ 0.7
ATPAF1-213ENST00000574428 ZNF695Q8IW36 515 aa19.41■□□□□ 0.7
ATPAF1-213ENST00000574428 SELENOHQ8IZQ5 122 aaKnown RBP19.41■□□□□ 0.7
ATPAF1-213ENST00000574428 TCTEX1D1Q8N7M0 179 aa19.41■□□□□ 0.7
ATPAF1-213ENST00000574428 OR5AN1Q8NGI8 311 aa19.41■□□□□ 0.7
ATPAF1-213ENST00000574428 SLC35D1Q9NTN3 355 aa19.41■□□□□ 0.7
ATPAF1-213ENST00000574428 DBX1A6NMT0 343 aa19.4■□□□□ 0.7
ATPAF1-213ENST00000574428 CCSO14618 274 aa19.4■□□□□ 0.7
ATPAF1-213ENST00000574428 RGS13O14921 159 aa19.4■□□□□ 0.7
ATPAF1-213ENST00000574428 TXNL1O43396 289 aa19.4■□□□□ 0.7
ATPAF1-213ENST00000574428 KIR2DS2P43631 304 aa19.4■□□□□ 0.7
ATPAF1-213ENST00000574428 LYZL2Q7Z4W2 148 aa19.4■□□□□ 0.7
ATPAF1-213ENST00000574428 SLC35G3Q8N808 338 aa19.4■□□□□ 0.7
ATPAF1-213ENST00000574428 LRTM2Q8N967 370 aa19.4■□□□□ 0.7
ATPAF1-213ENST00000574428 ASB13Q8WXK3 278 aa19.4■□□□□ 0.7
ATPAF1-213ENST00000574428 C18orf12Q96KH6 178 aa19.4■□□□□ 0.7
ATPAF1-213ENST00000574428 H7C2Y5 167 aa19.39■□□□□ 0.7
ATPAF1-213ENST00000574428 APOA2P02652 100 aa19.39■□□□□ 0.7
ATPAF1-213ENST00000574428 HOXB5P09067 269 aa19.39■□□□□ 0.7
ATPAF1-213ENST00000574428 RTL8BQ17RB0 113 aa19.39■□□□□ 0.7
ATPAF1-213ENST00000574428 OR4S2Q8NH73 311 aa19.39■□□□□ 0.7
ATPAF1-213ENST00000574428 CD300LFQ8TDQ1 290 aa19.39■□□□□ 0.7
ATPAF1-213ENST00000574428 RBPMSQ93062 196 aaKnown RBP19.39■□□□□ 0.7
ATPAF1-213ENST00000574428 SETXQ7Z333 2677 aaKnown RBP19.39■□□□□ 0.69
ATPAF1-213ENST00000574428 TIMM23O14925 209 aa19.39■□□□□ 0.69
ATPAF1-213ENST00000574428 CRYZL1O95825 349 aa19.39■□□□□ 0.69
ATPAF1-213ENST00000574428 IGKV1-16P04430 117 aa19.39■□□□□ 0.69
ATPAF1-213ENST00000574428 HLA-GP17693 338 aa19.39■□□□□ 0.69
ATPAF1-213ENST00000574428 FAM212BQ9NTI7 297 aaPredicted RBP19.39■□□□□ 0.69
ATPAF1-213ENST00000574428 SOX21Q9Y651 276 aaPredicted RBP19.39■□□□□ 0.69
ATPAF1-213ENST00000574428 RBFOX2O43251 390 aaKnown RBP eCLIP19.38■□□□□ 0.69
ATPAF1-213ENST00000574428 MALSU1Q96EH3 234 aa19.38■□□□□ 0.69
ATPAF1-213ENST00000574428 SLA2Q9H6Q3 261 aa19.38■□□□□ 0.69
ATPAF1-213ENST00000574428 CD5LO43866 347 aa19.37■□□□□ 0.69
ATPAF1-213ENST00000574428 RPA2P15927 270 aa19.37■□□□□ 0.69
ATPAF1-213ENST00000574428 SRSF4Q08170 494 aaKnown RBP19.37■□□□□ 0.69
ATPAF1-213ENST00000574428 OR8H3Q8N146 312 aa19.37■□□□□ 0.69
ATPAF1-213ENST00000574428 IL22RA2Q969J5 263 aa19.37■□□□□ 0.69
ATPAF1-213ENST00000574428 WASHC3Q9Y3C0 194 aa19.37■□□□□ 0.69
ATPAF1-213ENST00000574428 A0A0U1RQK1 487 aa19.37■□□□□ 0.69
ATPAF1-213ENST00000574428 OOSP1A8MZH6 123 aa19.37■□□□□ 0.69
ATPAF1-213ENST00000574428 LGALSLQ3ZCW2 172 aaPredicted RBP19.37■□□□□ 0.69
ATPAF1-213ENST00000574428 CCDC144NLQ6NUI1 221 aa19.37■□□□□ 0.69
ATPAF1-213ENST00000574428 RAB18Q9NP72 206 aa19.37■□□□□ 0.69
ATPAF1-213ENST00000574428 MPTX1A8MV57 137 aa19.36■□□□□ 0.69
ATPAF1-213ENST00000574428 FAM25EA8MYX2 175 aa19.36■□□□□ 0.69
ATPAF1-213ENST00000574428 HPRT1P00492 218 aa19.36■□□□□ 0.69
ATPAF1-213ENST00000574428 KRASP01116 189 aa19.36■□□□□ 0.69
ATPAF1-213ENST00000574428 IGKV1-5P01602 117 aa19.36■□□□□ 0.69
ATPAF1-213ENST00000574428 MC5RP33032 325 aa19.36■□□□□ 0.69
ATPAF1-213ENST00000574428 G6PCP35575 357 aa19.36■□□□□ 0.69
ATPAF1-213ENST00000574428 TAGLNQ01995 201 aaKnown RBP19.36■□□□□ 0.69
ATPAF1-213ENST00000574428 GGNBP1Q5YKI7 109 aa19.36■□□□□ 0.69
ATPAF1-213ENST00000574428 PDPNQ86YL7 162 aa19.36■□□□□ 0.69
ATPAF1-213ENST00000574428 CFHR4Q92496 578 aa19.36■□□□□ 0.69
ATPAF1-213ENST00000574428 GON7Q9BXV9 100 aa19.36■□□□□ 0.69
ATPAF1-213ENST00000574428 PLEKHA2Q9HB19 425 aa19.36■□□□□ 0.69
ATPAF1-213ENST00000574428 CSPG4Q6UVK1 2322 aa19.35■□□□□ 0.69
ATPAF1-213ENST00000574428 FSHBP01225 129 aa19.35■□□□□ 0.69
ATPAF1-213ENST00000574428 RRASP10301 218 aa19.35■□□□□ 0.69
ATPAF1-213ENST00000574428 RAB13P51153 203 aa19.35■□□□□ 0.69
ATPAF1-213ENST00000574428 NANPQ8TBE9 248 aa19.35■□□□□ 0.69
ATPAF1-213ENST00000574428 ACANP16112 2415 aa19.35■□□□□ 0.69
ATPAF1-213ENST00000574428 C13orf42A0A1B0GVH6 325 aa19.34■□□□□ 0.69
ATPAF1-213ENST00000574428 CD24P25063 80 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms