RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 KLHDC1Q8N7A1 406 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 TMEM229BQ8NBD8 167 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 TRIM63Q969Q1 353 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 THAP7Q9BT49 309 aaPredicted RBP8.75□□□□□ -1.01
CHD3-216ENST00000573936 WNT10AQ9GZT5 417 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 TAS2R8Q9NYW2 309 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 WNK1Q9H4A3 2382 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 RRHO14718 337 aa8.74□□□□□ -1.01
CHD3-216ENST00000573936 SPDEFO95238 335 aa8.74□□□□□ -1.01
CHD3-216ENST00000573936 CSF1P09603 554 aa8.74□□□□□ -1.01
CHD3-216ENST00000573936 IL7P13232 177 aa8.74□□□□□ -1.01
CHD3-216ENST00000573936 S100GP29377 79 aa8.74□□□□□ -1.01
CHD3-216ENST00000573936 KIR2DS2P43631 304 aa8.74□□□□□ -1.01
CHD3-216ENST00000573936 FXYD4P59646 89 aa8.74□□□□□ -1.01
CHD3-216ENST00000573936 PLGLAQ15195 96 aa8.74□□□□□ -1.01
CHD3-216ENST00000573936 C5orf64Q2M2E5 130 aa8.74□□□□□ -1.01
CHD3-216ENST00000573936 RNASE10Q5GAN6 216 aaKnown RBP8.74□□□□□ -1.01
CHD3-216ENST00000573936 ZNF660Q6AZW8 331 aaPredicted RBP8.74□□□□□ -1.01
CHD3-216ENST00000573936 LIN54Q6MZP7 749 aa8.74□□□□□ -1.01
CHD3-216ENST00000573936 KCTD9Q7L273 389 aa8.74□□□□□ -1.01
CHD3-216ENST00000573936 CENPVQ7Z7K6 275 aaPredicted RBP8.74□□□□□ -1.01
CHD3-216ENST00000573936 BVESQ8NE79 360 aa8.74□□□□□ -1.01
CHD3-216ENST00000573936 CHPT1Q8WUD6 406 aa8.74□□□□□ -1.01
CHD3-216ENST00000573936 DDB2Q92466 427 aa8.74□□□□□ -1.01
CHD3-216ENST00000573936 MOB3AQ96BX8 217 aa8.74□□□□□ -1.01
CHD3-216ENST00000573936 C5orf30Q96GV9 206 aa8.74□□□□□ -1.01
CHD3-216ENST00000573936 CITED1Q99966 193 aa8.74□□□□□ -1.01
CHD3-216ENST00000573936 CCL28Q9NRJ3 127 aa8.74□□□□□ -1.01
CHD3-216ENST00000573936 SH2D7A6NKC9 451 aaPredicted RBP8.73□□□□□ -1.01
CHD3-216ENST00000573936 LINC00473A8K010 186 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 AP4M1O00189 453 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 SHOXO15266 292 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 IGLV2-14P01704 120 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 HLA-DRB1P01911 266 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 CD74P04233 296 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 CD3DP04234 171 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 IGKV1-16P04430 117 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 CNTFRP26992 372 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 UCP3P55916 312 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 LINC00205P59089 165 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 SLC35B1P78383 322 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 CATR1Q13166 79 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 MEF2DQ14814 521 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 TMEM177Q53S58 311 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 CMTM1Q8IZ96 169 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 ARRDC1Q8N5I2 433 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 OSR1Q8TAX0 266 aaPredicted RBP8.73□□□□□ -1.01
CHD3-216ENST00000573936 TCTEX1D2Q8WW35 142 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 RITA1Q96K30 269 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 HARBI1Q96MB7 349 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 CCDC32Q9BV29 185 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 GON7Q9BXV9 100 aa8.73□□□□□ -1.01
CHD3-216ENST00000573936 ANKRD20A5PA0PJZ0 165 aa8.72□□□□□ -1.01
CHD3-216ENST00000573936 M0QYG6 137 aa8.72□□□□□ -1.01
CHD3-216ENST00000573936 GPR31O00270 319 aa8.72□□□□□ -1.01
CHD3-216ENST00000573936 FCGR3BO75015 233 aa8.72□□□□□ -1.01
CHD3-216ENST00000573936 RAB3DO95716 219 aa8.72□□□□□ -1.01
CHD3-216ENST00000573936 GNRHRP30968 328 aa8.72□□□□□ -1.01
CHD3-216ENST00000573936 KRTAP10-3P60369 221 aa8.72□□□□□ -1.01
CHD3-216ENST00000573936 EIF4EBP1Q13541 118 aaPredicted RBP8.72□□□□□ -1.01
CHD3-216ENST00000573936 PSG5Q15238 335 aa8.72□□□□□ -1.01
CHD3-216ENST00000573936 VMA21Q3ZAQ7 101 aa8.72□□□□□ -1.01
CHD3-216ENST00000573936 TRIQKQ629K1 86 aa8.72□□□□□ -1.01
CHD3-216ENST00000573936 STEAP1BQ6NZ63 245 aa8.72□□□□□ -1.01
CHD3-216ENST00000573936 ZNF818PQ6ZRF7 136 aa8.72□□□□□ -1.01
CHD3-216ENST00000573936 POC5Q8NA72 575 aa8.72□□□□□ -1.01
CHD3-216ENST00000573936 OR4S2Q8NH73 311 aa8.72□□□□□ -1.01
CHD3-216ENST00000573936 CD300LFQ8TDQ1 290 aa8.72□□□□□ -1.01
CHD3-216ENST00000573936 AIFM2Q9BRQ8 373 aa8.72□□□□□ -1.01
CHD3-216ENST00000573936 FBXL15Q9H469 300 aa8.72□□□□□ -1.01
CHD3-216ENST00000573936 METTL1Q9UBP6 276 aaKnown RBP8.72□□□□□ -1.01
CHD3-216ENST00000573936 PSMB11A5LHX3 300 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 DISC1C4P0D8 188 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 FBXO24O75426 580 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 UPK1BO75841 260 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 CRYZL1O95825 349 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 AKAIN1P0CW23 69 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 ECI1P42126 302 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 AP3S2P59780 193 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 RPL30P62888 115 aaKnown RBP8.71□□□□□ -1.02
CHD3-216ENST00000573936 IFITM3Q01628 133 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 KLF9Q13886 244 aaPredicted RBP8.71□□□□□ -1.02
CHD3-216ENST00000573936 TMEM95Q3KNT9 176 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 SLC38A6Q8IZM9 456 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 STPG2Q8N412 459 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 COMMD1Q8N668 190 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 TCTEX1D1Q8N7M0 179 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 TEX45Q8NA69 505 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 OR5AU1Q8NGC0 362 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 OR4X2Q8NGF9 303 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 RBMXL1Q96E39 390 aaKnown RBP8.71□□□□□ -1.02
CHD3-216ENST00000573936 TINAGL1Q9GZM7 467 aaPredicted RBP8.71□□□□□ -1.02
CHD3-216ENST00000573936 FXYD6Q9H0Q3 95 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 OR51J1Q9H342 316 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 ZNF580Q9UK33 172 aa8.71□□□□□ -1.02
CHD3-216ENST00000573936 IGHV7-81A0A0B4J1V7 117 aa8.7□□□□□ -1.02
CHD3-216ENST00000573936 M0QZ24 198 aa8.7□□□□□ -1.02
CHD3-216ENST00000573936 RBFOX2O43251 390 aaKnown RBP eCLIP8.7□□□□□ -1.029e-6■■□□□ 11.7
CHD3-216ENST00000573936 TNFSF12O43508 249 aa8.7□□□□□ -1.02
CHD3-216ENST00000573936 SLC25A17O43808 307 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms