RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 ACTL6BO94805 426 aa9.48□□□□□ -0.89
CCDC40-208ENST00000572270 GALP22466 123 aa9.48□□□□□ -0.89
CCDC40-208ENST00000572270 BDKRB2P30411 391 aa9.48□□□□□ -0.89
CCDC40-208ENST00000572270 TNP2Q05952 138 aa9.48□□□□□ -0.89
CCDC40-208ENST00000572270 TTC9CQ8N5M4 171 aa9.48□□□□□ -0.89
CCDC40-208ENST00000572270 Q8NAQ8 132 aa9.48□□□□□ -0.89
CCDC40-208ENST00000572270 EEF1AKMT3Q96AZ1 226 aa9.48□□□□□ -0.89
CCDC40-208ENST00000572270 OR14A2Q96R54 314 aa9.48□□□□□ -0.89
CCDC40-208ENST00000572270 MYCBPQ99417 103 aaPredicted RBP9.48□□□□□ -0.89
CCDC40-208ENST00000572270 SPIN2AQ99865 258 aa9.48□□□□□ -0.89
CCDC40-208ENST00000572270 SPIN2BQ9BPZ2 258 aa9.48□□□□□ -0.89
CCDC40-208ENST00000572270 AGMATQ9BSE5 352 aa9.48□□□□□ -0.89
CCDC40-208ENST00000572270 SELENOIQ9C0D9 397 aa9.48□□□□□ -0.89
CCDC40-208ENST00000572270 ISG20L2Q9H9L3 353 aaKnown RBP9.48□□□□□ -0.89
CCDC40-208ENST00000572270 TAGLN3Q9UI15 199 aa9.48□□□□□ -0.89
CCDC40-208ENST00000572270 DNAH5Q8TE73 4624 aa9.47□□□□□ -0.89
CCDC40-208ENST00000572270 M0R1X1 148 aa9.47□□□□□ -0.89
CCDC40-208ENST00000572270 HOXB6P17509 224 aaKnown RBP9.47□□□□□ -0.89
CCDC40-208ENST00000572270 ELLP55199 621 aaPredicted RBP9.47□□□□□ -0.89
CCDC40-208ENST00000572270 MS4A2Q01362 244 aa9.47□□□□□ -0.89
CCDC40-208ENST00000572270 VMA21Q3ZAQ7 101 aa9.47□□□□□ -0.89
CCDC40-208ENST00000572270 UNQ9165/PRO28630Q6UXU0 137 aa9.47□□□□□ -0.89
CCDC40-208ENST00000572270 ARHGAP24Q8N264 748 aa9.47□□□□□ -0.89
CCDC40-208ENST00000572270 CANT1Q8WVQ1 401 aa9.47□□□□□ -0.89
CCDC40-208ENST00000572270 NRBF2Q96F24 287 aa9.47□□□□□ -0.89
CCDC40-208ENST00000572270 ZNF184Q99676 751 aaPredicted RBP9.47□□□□□ -0.89
CCDC40-208ENST00000572270 C11orf54Q9H0W9 315 aaPredicted RBP9.47□□□□□ -0.89
CCDC40-208ENST00000572270 BANF2Q9H503 90 aa9.47□□□□□ -0.89
CCDC40-208ENST00000572270 ZNF257Q9Y2Q1 563 aa9.47□□□□□ -0.89
CCDC40-208ENST00000572270 S4R3C0 116 aa9.47□□□□□ -0.89
CCDC40-208ENST00000572270 IGHV4-28A0A0C4DH34 117 aa9.46□□□□□ -0.9
CCDC40-208ENST00000572270 CREBL2O60519 120 aaPredicted RBP9.46□□□□□ -0.9
CCDC40-208ENST00000572270 PDCD6O75340 191 aa9.46□□□□□ -0.9
CCDC40-208ENST00000572270 CEACAM6P40199 344 aa9.46□□□□□ -0.9
CCDC40-208ENST00000572270 PRSS8Q16651 343 aa9.46□□□□□ -0.9
CCDC40-208ENST00000572270 GLIPR1L1Q6UWM5 242 aa9.46□□□□□ -0.9
CCDC40-208ENST00000572270 TEX45Q8NA69 505 aa9.46□□□□□ -0.9
CCDC40-208ENST00000572270 OR8J1Q8NGP2 316 aa9.46□□□□□ -0.9
CCDC40-208ENST00000572270 SETD6Q8TBK2 473 aa9.46□□□□□ -0.9
CCDC40-208ENST00000572270 CHRDL1Q9BU40 450 aa9.46□□□□□ -0.9
CCDC40-208ENST00000572270 DPPA5A6NC42 116 aa9.45□□□□□ -0.9
CCDC40-208ENST00000572270 DYNC1I1O14576 645 aa9.45□□□□□ -0.9
CCDC40-208ENST00000572270 PROP1O75360 226 aa9.45□□□□□ -0.9
CCDC40-208ENST00000572270 CRTAPO75718 401 aaPredicted RBP9.45□□□□□ -0.9
CCDC40-208ENST00000572270 CD74P04233 296 aa9.45□□□□□ -0.9
CCDC40-208ENST00000572270 RBMY1CP0DJD4 496 aa9.45□□□□□ -0.9
CCDC40-208ENST00000572270 MGMTP16455 207 aa9.45□□□□□ -0.9
CCDC40-208ENST00000572270 ZBTB25P24278 435 aa9.45□□□□□ -0.9
CCDC40-208ENST00000572270 CMC4P56277 68 aaPredicted RBP9.45□□□□□ -0.9
CCDC40-208ENST00000572270 MRPL28Q13084 256 aaKnown RBP9.45□□□□□ -0.9
CCDC40-208ENST00000572270 ZNF124Q15973 351 aa9.45□□□□□ -0.9
CCDC40-208ENST00000572270 RTL8BQ17RB0 113 aa9.45□□□□□ -0.9
CCDC40-208ENST00000572270 AWAT2Q6E213 333 aa9.45□□□□□ -0.9
CCDC40-208ENST00000572270 SIGIRRQ6IA17 410 aa9.45□□□□□ -0.9
CCDC40-208ENST00000572270 ACBD7Q8N6N7 88 aa9.45□□□□□ -0.9
CCDC40-208ENST00000572270 GPR148Q8TDV2 347 aa9.45□□□□□ -0.9
CCDC40-208ENST00000572270 CYYR1Q96J86 154 aa9.45□□□□□ -0.9
CCDC40-208ENST00000572270 C18orf15Q96N68 181 aa9.45□□□□□ -0.9
CCDC40-208ENST00000572270 CHMP1AQ9HD42 196 aaPredicted RBP9.45□□□□□ -0.9
CCDC40-208ENST00000572270 MRPS14O60783 128 aaKnown RBP9.44□□□□□ -0.9
CCDC40-208ENST00000572270 MIFP14174 115 aa9.44□□□□□ -0.9
CCDC40-208ENST00000572270 UBE2KP61086 200 aa9.44□□□□□ -0.9
CCDC40-208ENST00000572270 SNRPGP62308 76 aaKnown RBP9.44□□□□□ -0.9
CCDC40-208ENST00000572270 IDO2Q6ZQW0 420 aa9.44□□□□□ -0.9
CCDC40-208ENST00000572270 ZNF367Q7RTV3 350 aa9.44□□□□□ -0.9
CCDC40-208ENST00000572270 SVOPQ8N4V2 548 aa9.44□□□□□ -0.9
CCDC40-208ENST00000572270 MUL1Q969V5 352 aa9.44□□□□□ -0.9
CCDC40-208ENST00000572270 CCDC124Q96CT7 223 aaKnown RBP9.44□□□□□ -0.9
CCDC40-208ENST00000572270 Q96M66 194 aa9.44□□□□□ -0.9
CCDC40-208ENST00000572270 OR1A1Q9P1Q5 309 aa9.44□□□□□ -0.9
CCDC40-208ENST00000572270 TRBV7-1A0A0A6YYK4 115 aa9.43□□□□□ -0.9
CCDC40-208ENST00000572270 IGHV3-35A0A0C4DH35 117 aa9.43□□□□□ -0.9
CCDC40-208ENST00000572270 SRRM4A7MD48 611 aaKnown RBP9.43□□□□□ -0.9
CCDC40-208ENST00000572270 J3QRE1 110 aa9.43□□□□□ -0.9
CCDC40-208ENST00000572270 DHFRP00374 187 aa9.43□□□□□ -0.9
CCDC40-208ENST00000572270 GBX2P52951 348 aaPredicted RBP9.43□□□□□ -0.9
CCDC40-208ENST00000572270 TAGLNQ01995 201 aaKnown RBP9.43□□□□□ -0.9
CCDC40-208ENST00000572270 MOB1BQ7L9L4 216 aa9.43□□□□□ -0.9
CCDC40-208ENST00000572270 SYS1Q8N2H4 156 aa9.43□□□□□ -0.9
CCDC40-208ENST00000572270 JAGN1Q8N5M9 183 aa9.43□□□□□ -0.9
CCDC40-208ENST00000572270 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.43□□□□□ -0.9
CCDC40-208ENST00000572270 PTX4Q96A99 478 aa9.43□□□□□ -0.9
CCDC40-208ENST00000572270 NEDD4LQ96PU5 975 aa9.43□□□□□ -0.9
CCDC40-208ENST00000572270 MYCBP2O75592 4640 aa9.42□□□□□ -0.9
CCDC40-208ENST00000572270 AQP12BA6NM10 295 aa9.42□□□□□ -0.9
CCDC40-208ENST00000572270 C15orf61A6NNL5 157 aa9.42□□□□□ -0.9
CCDC40-208ENST00000572270 CLEC3BP05452 202 aa9.42□□□□□ -0.9
CCDC40-208ENST00000572270 CTSDP07339 412 aaPredicted RBP9.42□□□□□ -0.9
CCDC40-208ENST00000572270 RRASP10301 218 aa9.42□□□□□ -0.9
CCDC40-208ENST00000572270 PSMB6P28072 239 aa9.42□□□□□ -0.9
CCDC40-208ENST00000572270 PLET1Q6UQ28 207 aa9.42□□□□□ -0.9
CCDC40-208ENST00000572270 ZNF767PQ75MW2 155 aa9.42□□□□□ -0.9
CCDC40-208ENST00000572270 LHFPL3Q86UP9 236 aa9.42□□□□□ -0.9
CCDC40-208ENST00000572270 AQP12AQ8IXF9 295 aa9.42□□□□□ -0.9
CCDC40-208ENST00000572270 THTPAQ9BU02 230 aa9.42□□□□□ -0.9
CCDC40-208ENST00000572270 ZNF430Q9H8G1 570 aaPredicted RBP9.42□□□□□ -0.9
CCDC40-208ENST00000572270 DAZ1Q9NQZ3 744 aaKnown RBP9.42□□□□□ -0.9
CCDC40-208ENST00000572270 IMPAD1Q9NX62 359 aa9.42□□□□□ -0.9
CCDC40-208ENST00000572270 CKLFQ9UBR5 152 aa9.42□□□□□ -0.9
CCDC40-208ENST00000572270 HMX3A6NHT5 357 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms