RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 MXRA5Q9NR99 2828 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 ABCA2Q9BZC7 2435 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 PNMA8CA0A1B0GUJ8 204 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 A0A1B0GUS0 222 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 RPL37AP8A6NKH3 93 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 GABRPO00591 440 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 NPFFO15130 113 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 DENRO43583 198 aaKnown RBP2.99□□□□□ -1.93
NUP88-202ENST00000570937 ANGPTL7O43827 346 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 ATP6V1G1O75348 118 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 ZNF737O75373 536 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 OR2H2O95918 312 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 MAS1P04201 325 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 CSN2P05814 226 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 SFTPBP07988 381 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 UBBP0CG47 229 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 HSMCR30P0CW71 290 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 ZNF44P15621 663 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 SRMP19623 302 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 GZMHP20718 246 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 CRHBPP24387 322 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 RBMXP38159 391 aaKnown RBP2.99□□□□□ -1.93
NUP88-202ENST00000570937 NPBWR2P48146 333 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 PRRX1P54821 245 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 GABARAPL2P60520 117 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 MLLT11Q13015 90 aaPredicted RBP2.99□□□□□ -1.93
NUP88-202ENST00000570937 DYNC1I2Q13409 638 aaKnown RBP2.99□□□□□ -1.93
NUP88-202ENST00000570937 EDDM3AQ14507 147 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 MPV17LQ2QL34 196 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 ACSM3Q53FZ2 586 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 HSD17B12Q53GQ0 312 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 KLF17Q5JT82 389 aaPredicted RBP2.99□□□□□ -1.93
NUP88-202ENST00000570937 GLT8D1Q68CQ7 371 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 XAF1Q6GPH4 301 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 THOC7Q6I9Y2 204 aaKnown RBP2.99□□□□□ -1.93
NUP88-202ENST00000570937 C12orf54Q6X4T0 127 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 ASCL4Q6XD76 172 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 BRD3OSQ6XYD6 125 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 PRSS48Q7RTY5 328 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 BATF2Q8N1L9 274 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 JAGN1Q8N5M9 183 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 C3orf56Q8N813 242 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 OR4M1Q8NGD0 313 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 OR4D6Q8NGJ1 314 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 OR5D18Q8NGL1 313 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 OR1B1Q8NGR6 318 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 OR10AC1Q8NH08 325 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 SETD6Q8TBK2 473 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 RPS4Y2Q8TD47 263 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 FCGR1BQ92637 280 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 RFT1Q96AA3 541 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 DERL3Q96Q80 235 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 SPACA5Q96QH8 159 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 TBX15Q96SF7 602 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 UQCC2Q9BRT2 126 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 TMED9Q9BVK6 235 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 NCOR1P1Q9H4R4 102 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 VCX3AQ9NNX9 186 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 RAB18Q9NP72 206 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 ISYNA1Q9NPH2 558 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 C19orf12Q9NSK7 152 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 IL36GQ9NZH8 169 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 PAIP2BQ9ULR5 123 aaKnown RBP2.99□□□□□ -1.93
NUP88-202ENST00000570937 PRELID1Q9Y255 219 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 ST3GAL6Q9Y274 331 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 LINC00312Q9Y6C7 94 aa2.99□□□□□ -1.93
NUP88-202ENST00000570937 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.99□□□□□ -1.937e-8■■■□□ 17.6
NUP88-202ENST00000570937 ZFHX3Q15911 3703 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 FBN1P35555 2871 aaKnown RBP2.98□□□□□ -1.93
NUP88-202ENST00000570937 MALRD1Q5VYJ5 2156 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 IGKV1-12A0A0C4DH73 117 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 A0A0U1RQK1 487 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 KBTBD11-OT1A0A1B0GTJ5 212 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 A0A1B0GW55 424 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 ODAMA1E959 279 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 TMEM89A2RUT3 159 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 ZNF729A6NN14 1252 aaPredicted RBP2.98□□□□□ -1.93
NUP88-202ENST00000570937 C17orf98A8MV24 154 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 MCRIP1C9JLW8 97 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 RNASEK-C17orf49H0YIS7 233 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 SIRPB1O00241 398 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 SLC33A1O00400 549 aaPredicted RBP2.98□□□□□ -1.93
NUP88-202ENST00000570937 TOR1AO14656 332 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 PDCD5O14737 125 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 CA11O75493 328 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 CRTAPO75718 401 aaPredicted RBP2.98□□□□□ -1.93
NUP88-202ENST00000570937 OR7C1O76099 320 aaPredicted RBP2.98□□□□□ -1.93
NUP88-202ENST00000570937 CDRT1O95170 752 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 VENTXO95231 258 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 LALBAP00709 142 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 IGKV1D-12P01611 117 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 ARG1P05089 322 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 GLAP06280 429 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 S100A6P06703 90 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 DUX4L2P0CJ85 424 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 DUX4L3P0CJ86 424 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 DUX4L4P0CJ87 422 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 DUX4L5P0CJ88 424 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 DUX4L6P0CJ89 424 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 DUX4L7P0CJ90 424 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms