RNA–Protein interactions for RNA: ENST00000569950.1

VPS35-211, Transcript of VPS35, retromer complex component, humanhuman

TSL 5

Gene VPS35, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-211ENST00000569950 MOSP00540 346 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 IFNA6P05013 189 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 F2RP25116 425 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 MC5RP33032 325 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 AP3S2P59780 193 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 DHODHQ02127 395 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 OR2B11Q5JQS5 317 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 C11orf88Q6PI97 169 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 Q6ZSV7 163 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 KCTD9Q7L273 389 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 TBC1D26Q86UD7 250 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 PDPNQ86YL7 162 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 OR2T10Q8NGZ9 312 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 LHFPL5Q8TAF8 219 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 WIPF2Q8TF74 440 aaPredicted RBP7.37□□□□□ -1.23
VPS35-211ENST00000569950 ZNF486Q96H40 463 aaPredicted RBP7.37□□□□□ -1.23
VPS35-211ENST00000569950 ADTRPQ96IZ2 230 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 TP53RKQ96S44 253 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 C7orf50Q9BRJ6 194 aaKnown RBP7.37□□□□□ -1.23
VPS35-211ENST00000569950 SLC25A33Q9BSK2 321 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 ZNF702PQ9H963 129 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 SLC35D1Q9NTN3 355 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 MCUBQ9NWR8 336 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 FLVCR2Q9UPI3 526 aa7.37□□□□□ -1.23
VPS35-211ENST00000569950 RBM7Q9Y580 266 aaKnown RBP7.37□□□□□ -1.23
VPS35-211ENST00000569950 NAP1L6A6NFF2 107 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 CRYM-AS1A6NIL9 109 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 LINC01548A6NM66 108 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 FCN1O00602 326 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 MPPED1O15442 326 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 FCGR3BO75015 233 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 TSPAN9O75954 239 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 CRYZL1O95825 349 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 P0C879 139 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 FAM106CPP0CH98 169 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 TMEM11P17152 192 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 PIGPP57054 158 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 NDPQ00604 133 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 PSG5Q15238 335 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 POU2AF1Q16633 256 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 RBMS3Q6XE24 437 aaKnown RBP7.36□□□□□ -1.23
VPS35-211ENST00000569950 LIAT1Q6ZQX7 453 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 OR51H1Q8NH63 302 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 GLYATL2Q8WU03 294 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 ZFAND2BQ8WV99 257 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 SERTAD4Q9NUC0 356 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 SCP2D1Q9UJQ7 156 aa7.36□□□□□ -1.23
VPS35-211ENST00000569950 A0A0G2JRQ6 117 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 A0A1B0GW64 132 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 NBR2O15453 112 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 FGF16O43320 207 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 PEX14O75381 377 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 S1PR2O95136 353 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 EGR2P11161 476 aaPredicted RBP7.35□□□□□ -1.23
VPS35-211ENST00000569950 PGAM2P15259 253 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 SPNP16150 400 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 UCP1P25874 307 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 FAUP35544 74 aaKnown RBP7.35□□□□□ -1.23
VPS35-211ENST00000569950 MECP2P51608 486 aaKnown RBP7.35□□□□□ -1.23
VPS35-211ENST00000569950 RPL15P61313 204 aaKnown RBP7.35□□□□□ -1.23
VPS35-211ENST00000569950 TAGLNQ01995 201 aaKnown RBP7.35□□□□□ -1.23
VPS35-211ENST00000569950 PJVKQ0ZLH3 352 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 C5orf64Q2M2E5 130 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 TMEM95Q3KNT9 176 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 DHRS7BQ6IAN0 325 aaPredicted RBP7.35□□□□□ -1.23
VPS35-211ENST00000569950 LPCAT3Q6P1A2 487 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 C16orf82Q7Z2V1 217 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 VKORC1L1Q8N0U8 176 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 SPAG16Q8N0X2 631 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 PUSL1Q8N0Z8 303 aaKnown RBP7.35□□□□□ -1.23
VPS35-211ENST00000569950 TCTEX1D2Q8WW35 142 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 JMJD8Q96S16 334 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 TSC22D3Q99576 134 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 RNF5Q99942 180 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 HSPB9Q9BQS6 159 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 FBXL15Q9H469 300 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 C16orf95Q9H693 158 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 FAM212BQ9NTI7 297 aaPredicted RBP7.35□□□□□ -1.23
VPS35-211ENST00000569950 SIGLEC9Q9Y336 463 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 MOB4Q9Y3A3 225 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 FBXO7Q9Y3I1 522 aa7.35□□□□□ -1.23
VPS35-211ENST00000569950 TRAV3A0A0B4J244 114 aa7.34□□□□□ -1.23
VPS35-211ENST00000569950 CGB1A6NKQ9 187 aa7.34□□□□□ -1.23
VPS35-211ENST00000569950 H0Y980 276 aa7.34□□□□□ -1.23
VPS35-211ENST00000569950 H7C2Y5 167 aa7.34□□□□□ -1.23
VPS35-211ENST00000569950 TRIM77I1YAP6 450 aa7.34□□□□□ -1.23
VPS35-211ENST00000569950 RRHO14718 337 aa7.34□□□□□ -1.23
VPS35-211ENST00000569950 ARPC1BO15143 372 aaKnown RBP7.34□□□□□ -1.23
VPS35-211ENST00000569950 NDUFA7O95182 113 aa7.34□□□□□ -1.23
VPS35-211ENST00000569950 IFNA2P01563 188 aa7.34□□□□□ -1.23
VPS35-211ENST00000569950 IGKV1-5P01602 117 aa7.34□□□□□ -1.23
VPS35-211ENST00000569950 HLA-DRB1P01911 266 aa7.34□□□□□ -1.23
VPS35-211ENST00000569950 APOA2P02652 100 aa7.34□□□□□ -1.23
VPS35-211ENST00000569950 TCRBP04435 133 aa7.34□□□□□ -1.23
VPS35-211ENST00000569950 SAA1P0DJI8 122 aaPredicted RBP7.34□□□□□ -1.23
VPS35-211ENST00000569950 HKR1P10072 659 aa7.34□□□□□ -1.23
VPS35-211ENST00000569950 ECI1P42126 302 aa7.34□□□□□ -1.23
VPS35-211ENST00000569950 LPAR6P43657 344 aa7.34□□□□□ -1.23
VPS35-211ENST00000569950 ARHGDIBP52566 201 aa7.34□□□□□ -1.23
VPS35-211ENST00000569950 KRTAP10-3P60369 221 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms