RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 CA2P00918 260 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 IGLV2-23P01705 113 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 ZP3P21754 424 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 MAS1LP35410 378 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 CHRNA7P36544 502 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 KIR2DS2P43631 304 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 UNQ5815/PRO19632Q6UWF5 114 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 GLDNQ6ZMI3 551 aaPredicted RBP8.68□□□□□ -1.02
CDH3-206ENST00000567674 C18orf65Q6ZTR6 163 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 SLC25A42Q86VD7 318 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 POC5Q8NA72 575 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 S100A16Q96FQ6 103 aaKnown RBP8.68□□□□□ -1.02
CDH3-206ENST00000567674 CYYR1Q96J86 154 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 HARBI1Q96MB7 349 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 SPIN2AQ99865 258 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 SPIN2BQ9BPZ2 258 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 ST6GALNAC5Q9BVH7 336 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 OR51E2Q9H255 320 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 RANGRFQ9HD47 186 aaPredicted RBP8.68□□□□□ -1.02
CDH3-206ENST00000567674 TPSG1Q9NRR2 321 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 TRIM64CA6NLI5 447 aa8.67□□□□□ -1.02
CDH3-206ENST00000567674 SEC14L6B5MCN3 397 aa8.67□□□□□ -1.02
CDH3-206ENST00000567674 OVOL1O14753 267 aa8.67□□□□□ -1.02
CDH3-206ENST00000567674 RBFOX2O43251 390 aaKnown RBP eCLIP8.67□□□□□ -1.02
CDH3-206ENST00000567674 XRCC3O43542 346 aa8.67□□□□□ -1.02
CDH3-206ENST00000567674 SLC25A17O43808 307 aa8.67□□□□□ -1.02
CDH3-206ENST00000567674 SOX15O60248 233 aa8.67□□□□□ -1.02
CDH3-206ENST00000567674 TPPPO94811 219 aa8.67□□□□□ -1.02
CDH3-206ENST00000567674 CNIH1O95406 144 aa8.67□□□□□ -1.02
CDH3-206ENST00000567674 NDPQ00604 133 aa8.67□□□□□ -1.02
CDH3-206ENST00000567674 HOGA1Q86XE5 327 aa8.67□□□□□ -1.02
CDH3-206ENST00000567674 MMD2Q8IY49 270 aa8.67□□□□□ -1.02
CDH3-206ENST00000567674 DRAXINQ8NBI3 349 aaPredicted RBP8.67□□□□□ -1.02
CDH3-206ENST00000567674 LFNGQ8NES3 379 aa8.67□□□□□ -1.02
CDH3-206ENST00000567674 CD300LFQ8TDQ1 290 aa8.67□□□□□ -1.02
CDH3-206ENST00000567674 GIMAP1Q8WWP7 306 aa8.67□□□□□ -1.02
CDH3-206ENST00000567674 KRTAP17-1Q9BYP8 105 aa8.67□□□□□ -1.02
CDH3-206ENST00000567674 SIGLEC8Q9NYZ4 499 aa8.67□□□□□ -1.02
CDH3-206ENST00000567674 ZNF230Q9UIE0 474 aaPredicted RBP8.67□□□□□ -1.02
CDH3-206ENST00000567674 SCOCQ9UIL1 159 aa8.67□□□□□ -1.02
CDH3-206ENST00000567674 RBMX2Q9Y388 322 aaKnown RBP8.67□□□□□ -1.02
CDH3-206ENST00000567674 FBXO7Q9Y3I1 522 aa8.67□□□□□ -1.02
CDH3-206ENST00000567674 A0A075B6Q4 140 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 ACTL6BO94805 426 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 CDK10Q15131 360 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 PRSS8Q16651 343 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 TATDN3Q17R31 274 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 ECSCRQ19T08 205 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 KLK9Q2XQG4 91 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 ACSM6Q6P461 480 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 BVESQ8NE79 360 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 BEST4Q8NFU0 473 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 TSPAN14Q8NG11 270 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 OR6Q1Q8NGQ2 317 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 OR4S2Q8NH73 311 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 OR4A5Q8NH83 315 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 LGALS14Q8TCE9 139 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 ACOT12Q8WYK0 555 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 ELOVL1Q9BW60 279 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 TINAGL1Q9GZM7 467 aaPredicted RBP8.66□□□□□ -1.02
CDH3-206ENST00000567674 GNB4Q9HAV0 340 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 KLK9Q9UKQ9 250 aa8.66□□□□□ -1.02
CDH3-206ENST00000567674 LSM4Q9Y4Z0 139 aaKnown RBP8.66□□□□□ -1.02
CDH3-206ENST00000567674 A0A0B4J203 849 aa8.65□□□□□ -1.02
CDH3-206ENST00000567674 C13orf42A0A1B0GVH6 325 aa8.65□□□□□ -1.02
CDH3-206ENST00000567674 WI2-2373I1.2A0A1W2PRP0 233 aa8.65□□□□□ -1.02
CDH3-206ENST00000567674 TMEM235A6NFC5 223 aa8.65□□□□□ -1.02
CDH3-206ENST00000567674 FAM223BA6NKX1 122 aa8.65□□□□□ -1.02
CDH3-206ENST00000567674 AIREO43918 545 aa8.65□□□□□ -1.02
CDH3-206ENST00000567674 HRASP01112 189 aa8.65□□□□□ -1.02
CDH3-206ENST00000567674 PRB2P02812 416 aaPredicted RBP8.65□□□□□ -1.02
CDH3-206ENST00000567674 SNRPBP14678 240 aaKnown RBP8.65□□□□□ -1.02
CDH3-206ENST00000567674 EIF4EBP1Q13541 118 aaPredicted RBP8.65□□□□□ -1.02
CDH3-206ENST00000567674 NEDD8Q15843 81 aa8.65□□□□□ -1.02
CDH3-206ENST00000567674 IDNKQ5T6J7 187 aa8.65□□□□□ -1.02
CDH3-206ENST00000567674 DHRS11Q6UWP2 260 aa8.65□□□□□ -1.02
CDH3-206ENST00000567674 FAM223AQ8IWN6 122 aa8.65□□□□□ -1.02
CDH3-206ENST00000567674 OR5AP2Q8NGF4 316 aa8.65□□□□□ -1.02
CDH3-206ENST00000567674 ABHD5Q8WTS1 349 aa8.65□□□□□ -1.02
CDH3-206ENST00000567674 SLC25A38Q96DW6 304 aa8.65□□□□□ -1.02
CDH3-206ENST00000567674 SRSF8Q9BRL6 282 aaKnown RBP8.65□□□□□ -1.02
CDH3-206ENST00000567674 AUNIPQ9H7T9 357 aa8.65□□□□□ -1.02
CDH3-206ENST00000567674 ZNF256Q9Y2P7 627 aaPredicted RBP8.65□□□□□ -1.02
CDH3-206ENST00000567674 COL7A1Q02388 2944 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 TRAV18A0A075B6X5 111 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 IGKV1D-8A0A087WSZ0 117 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 LOC100506127A0A0U1RQW1 187 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 SRRM4A7MD48 611 aaKnown RBP8.64□□□□□ -1.03
CDH3-206ENST00000567674 LINC00473A8K010 186 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 SSX5O60225 188 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 CRYZL1O95825 349 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 IGLV2-14P01704 120 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 TRGV3P03979 118 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 OR9G9P0C7N8 305 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 NAT1P18440 290 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 HOXD3P31249 432 aaPredicted RBP8.64□□□□□ -1.03
CDH3-206ENST00000567674 RAB25P57735 213 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 TPPP2P59282 170 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 GNB1P62873 340 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 SSBP2P81877 361 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 228.9 ms