RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 FCAMRQ8WWV6 532 aa9.77□□□□□ -0.85
RNF40-211ENST00000567365 FLYWCH2Q96CP2 140 aaKnown RBP9.77□□□□□ -0.85
RNF40-211ENST00000567365 NOL4LQ96MY1 436 aaPredicted RBP9.77□□□□□ -0.85
RNF40-211ENST00000567365 GPHA2Q96T91 129 aa9.77□□□□□ -0.85
RNF40-211ENST00000567365 TSNAXQ99598 290 aaKnown RBP9.77□□□□□ -0.85
RNF40-211ENST00000567365 RASL11BQ9BPW5 248 aa9.77□□□□□ -0.85
RNF40-211ENST00000567365 ZNF2Q9BSG1 426 aaPredicted RBP9.77□□□□□ -0.85
RNF40-211ENST00000567365 TINAGL1Q9GZM7 467 aaPredicted RBP9.77□□□□□ -0.85
RNF40-211ENST00000567365 FBXL15Q9H469 300 aa9.77□□□□□ -0.85
RNF40-211ENST00000567365 AP4M1O00189 453 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 CD3DP04234 171 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 ZNF735P0CB33 412 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 CD28P10747 220 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 EGR2P11161 476 aaPredicted RBP9.76□□□□□ -0.85
RNF40-211ENST00000567365 ETV6P41212 452 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 LGALS7P47929 136 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 CRIP2P52943 208 aaPredicted RBP9.76□□□□□ -0.85
RNF40-211ENST00000567365 FXYD4P59646 89 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 ZNF79Q15937 498 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 ACTBL2Q562R1 376 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 LIN54Q6MZP7 749 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 KCTD9Q7L273 389 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 STPG2Q8N412 459 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 MFSD4AQ8N468 514 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 RNF152Q8N8N0 203 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 OR5AU1Q8NGC0 362 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 OR4D10Q8NGI6 311 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 OR6F1Q8NGZ6 308 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 SGMS2Q8NHU3 365 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 CITED2Q99967 270 aaPredicted RBP9.76□□□□□ -0.85
RNF40-211ENST00000567365 SLC5A7Q9GZV3 580 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 TPSG1Q9NRR2 321 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 TAS2R8Q9NYW2 309 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 FBXO7Q9Y3I1 522 aa9.76□□□□□ -0.85
RNF40-211ENST00000567365 A6NHS1 94 aa9.75□□□□□ -0.85
RNF40-211ENST00000567365 M0QYG6 137 aa9.75□□□□□ -0.85
RNF40-211ENST00000567365 RBFOX2O43251 390 aaKnown RBP eCLIP9.75□□□□□ -0.851e-7■■■■□ 26.4
RNF40-211ENST00000567365 FBXO24O75426 580 aa9.75□□□□□ -0.85
RNF40-211ENST00000567365 CRYZL1O95825 349 aa9.75□□□□□ -0.85
RNF40-211ENST00000567365 PPIFP30405 207 aaKnown RBP9.75□□□□□ -0.85
RNF40-211ENST00000567365 UCP3P55916 312 aa9.75□□□□□ -0.85
RNF40-211ENST00000567365 HERV-K104P61576 105 aa9.75□□□□□ -0.85
RNF40-211ENST00000567365 RPS16P62249 146 aaKnown RBP9.75□□□□□ -0.85
RNF40-211ENST00000567365 IL18Q14116 193 aa9.75□□□□□ -0.85
RNF40-211ENST00000567365 RTL8BQ17RB0 113 aa9.75□□□□□ -0.85
RNF40-211ENST00000567365 TMEM17Q86X19 198 aa9.75□□□□□ -0.85
RNF40-211ENST00000567365 FOXRED2Q8IWF2 684 aa9.75□□□□□ -0.85
RNF40-211ENST00000567365 ARRDC1Q8N5I2 433 aa9.75□□□□□ -0.85
RNF40-211ENST00000567365 C11orf44Q8N8P7 122 aa9.75□□□□□ -0.85
RNF40-211ENST00000567365 OSR1Q8TAX0 266 aaPredicted RBP9.75□□□□□ -0.85
RNF40-211ENST00000567365 CHPT1Q8WUD6 406 aa9.75□□□□□ -0.85
RNF40-211ENST00000567365 MRGPRFQ96AM1 343 aa9.75□□□□□ -0.85
RNF40-211ENST00000567365 OR51J1Q9H342 316 aa9.75□□□□□ -0.85
RNF40-211ENST00000567365 KIAA1456Q9P272 454 aa9.75□□□□□ -0.85
RNF40-211ENST00000567365 METTL1Q9UBP6 276 aaKnown RBP9.75□□□□□ -0.85
RNF40-211ENST00000567365 LINC00527Q9UJ94 153 aa9.75□□□□□ -0.85
RNF40-211ENST00000567365 ANKRD20A5PA0PJZ0 165 aa9.74□□□□□ -0.85
RNF40-211ENST00000567365 FABP12A6NFH5 140 aa9.74□□□□□ -0.85
RNF40-211ENST00000567365 SLC25A17O43808 307 aa9.74□□□□□ -0.85
RNF40-211ENST00000567365 FCGR3BO75015 233 aa9.74□□□□□ -0.85
RNF40-211ENST00000567365 PEX14O75381 377 aa9.74□□□□□ -0.85
RNF40-211ENST00000567365 TAS2R19P59542 299 aa9.74□□□□□ -0.85
RNF40-211ENST00000567365 UBE2KP61086 200 aa9.74□□□□□ -0.85
RNF40-211ENST00000567365 CX3CL1P78423 397 aa9.74□□□□□ -0.85
RNF40-211ENST00000567365 ARSJQ5FYB0 599 aaPredicted RBP9.74□□□□□ -0.85
RNF40-211ENST00000567365 RNASE10Q5GAN6 216 aaKnown RBP9.74□□□□□ -0.85
RNF40-211ENST00000567365 STEAP1BQ6NZ63 245 aa9.74□□□□□ -0.85
RNF40-211ENST00000567365 ZNF562Q6V9R5 426 aa9.74□□□□□ -0.85
RNF40-211ENST00000567365 CENPVQ7Z7K6 275 aaPredicted RBP9.74□□□□□ -0.85
RNF40-211ENST00000567365 ZNF329Q86UD4 541 aa9.74□□□□□ -0.85
RNF40-211ENST00000567365 OR6Q1Q8NGQ2 317 aa9.74□□□□□ -0.85
RNF40-211ENST00000567365 TRIM63Q969Q1 353 aa9.74□□□□□ -0.85
RNF40-211ENST00000567365 HARBI1Q96MB7 349 aa9.74□□□□□ -0.85
RNF40-211ENST00000567365 RSRP1Q9BUV0 290 aa9.74□□□□□ -0.85
RNF40-211ENST00000567365 PSMB11A5LHX3 300 aa9.73□□□□□ -0.85
RNF40-211ENST00000567365 ARPC1BO15143 372 aaKnown RBP9.73□□□□□ -0.85
RNF40-211ENST00000567365 SHOXO15266 292 aa9.73□□□□□ -0.85
RNF40-211ENST00000567365 ATP6V0E1O15342 81 aa9.73□□□□□ -0.85
RNF40-211ENST00000567365 TNFSF12O43508 249 aa9.73□□□□□ -0.85
RNF40-211ENST00000567365 RAMP3O60896 148 aa9.73□□□□□ -0.85
RNF40-211ENST00000567365 PGLYRP1O75594 196 aaPredicted RBP9.73□□□□□ -0.85
RNF40-211ENST00000567365 IGHG4P01861 327 aa9.73□□□□□ -0.85
RNF40-211ENST00000567365 PTBP1P26599 531 aaKnown RBP eCLIP9.73□□□□□ -0.85
RNF40-211ENST00000567365 PJVKQ0ZLH3 352 aa9.73□□□□□ -0.85
RNF40-211ENST00000567365 POU2AF1Q16633 256 aa9.73□□□□□ -0.85
RNF40-211ENST00000567365 PPP1R27Q86WC6 154 aa9.73□□□□□ -0.85
RNF40-211ENST00000567365 NDUFA11Q86Y39 141 aa9.73□□□□□ -0.85
RNF40-211ENST00000567365 COMMD1Q8N668 190 aa9.73□□□□□ -0.85
RNF40-211ENST00000567365 TEX45Q8NA69 505 aa9.73□□□□□ -0.85
RNF40-211ENST00000567365 MYOZ3Q8TDC0 251 aa9.73□□□□□ -0.85
RNF40-211ENST00000567365 BORCS5Q969J3 196 aa9.73□□□□□ -0.85
RNF40-211ENST00000567365 PRELID3BQ9Y3B1 194 aa9.73□□□□□ -0.85
RNF40-211ENST00000567365 NUBP2Q9Y5Y2 271 aa9.73□□□□□ -0.85
RNF40-211ENST00000567365 NOTCH1P46531 2555 aa9.73□□□□□ -0.85
RNF40-211ENST00000567365 DNAH3Q8TD57 4116 aa9.72□□□□□ -0.85
RNF40-211ENST00000567365 G3V318 75 aa9.72□□□□□ -0.85
RNF40-211ENST00000567365 GPR31O00270 319 aa9.72□□□□□ -0.85
RNF40-211ENST00000567365 RAB3DO95716 219 aa9.72□□□□□ -0.85
RNF40-211ENST00000567365 TSPAN15O95858 294 aa9.72□□□□□ -0.85
RNF40-211ENST00000567365 CA2P00918 260 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms