RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 OSR1Q8TAX0 266 aaPredicted RBP9.69□□□□□ -0.86
SF3B3-208ENST00000567250 DDB2Q92466 427 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 TRIM63Q969Q1 353 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 ZNF486Q96H40 463 aaPredicted RBP9.69□□□□□ -0.86
SF3B3-208ENST00000567250 PRRT1Q99946 306 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 SRRQ9GZT4 340 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 LINC00473A8K010 186 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 SHOXO15266 292 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 TNFSF12O43508 249 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 FCGR3BO75015 233 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 IGLV2-14P01704 120 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 IGKV1-16P04430 117 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 PGAM2P15259 253 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 LGALS7P47929 136 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 PPP5CP53041 499 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 UCP3P55916 312 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 RPS16P62249 146 aaKnown RBP9.68□□□□□ -0.86
SF3B3-208ENST00000567250 BLCAPP62952 87 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 TMEM177Q53S58 311 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 AADACL3Q5VUY0 350 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 LHFPL1Q86WI0 220 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 FOXRED2Q8IWF2 684 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 MFSD4AQ8N468 514 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 TCTEX1D1Q8N7M0 179 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 C3orf56Q8N813 242 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 OR4C16Q8NGL9 310 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 CD300LFQ8TDQ1 290 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 S100ZQ8WXG8 99 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 SCP2D1Q9UJQ7 156 aa9.68□□□□□ -0.86
SF3B3-208ENST00000567250 TENM1Q9UKZ4 2725 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 RRHO14718 337 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 RBFOX2O43251 390 aaKnown RBP eCLIP9.67□□□□□ -0.86
SF3B3-208ENST00000567250 CREBL2O60519 120 aaPredicted RBP9.67□□□□□ -0.86
SF3B3-208ENST00000567250 CRYZL1O95825 349 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 HLA-DRB1P01911 266 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 AMY1AP04745 511 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 RLN1P04808 185 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 GNRHRP30968 328 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 F2RL1P55085 397 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 EIF4EBP1Q13541 118 aaPredicted RBP9.67□□□□□ -0.86
SF3B3-208ENST00000567250 SURF2Q15527 256 aaPredicted RBP9.67□□□□□ -0.86
SF3B3-208ENST00000567250 C5orf64Q2M2E5 130 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 VMA21Q3ZAQ7 101 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 SLC35E3Q7Z769 313 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 CCDC71LQ8N9Z2 235 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 OR4D10Q8NGI6 311 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 TERB2Q8NHR7 220 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 ZFAND1Q8TCF1 268 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 TAF15Q92804 592 aaKnown RBP eCLIP9.67□□□□□ -0.86
SF3B3-208ENST00000567250 AIFM2Q9BRQ8 373 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 RSRP1Q9BUV0 290 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 MCUBQ9NWR8 336 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 SLC2A8Q9NY64 477 aa9.67□□□□□ -0.86
SF3B3-208ENST00000567250 METTL1Q9UBP6 276 aaKnown RBP9.67□□□□□ -0.86
SF3B3-208ENST00000567250 AP4M1O00189 453 aa9.66□□□□□ -0.86
SF3B3-208ENST00000567250 IGHG2P01859 326 aa9.66□□□□□ -0.86
SF3B3-208ENST00000567250 PROK1P58294 105 aa9.66□□□□□ -0.86
SF3B3-208ENST00000567250 LINC00205P59089 165 aa9.66□□□□□ -0.86
SF3B3-208ENST00000567250 OR2B11Q5JQS5 317 aa9.66□□□□□ -0.86
SF3B3-208ENST00000567250 ZNF57Q68EA5 555 aaPredicted RBP9.66□□□□□ -0.86
SF3B3-208ENST00000567250 FAAP20Q6NZ36 180 aa9.66□□□□□ -0.86
SF3B3-208ENST00000567250 OR51H1Q8NH63 302 aa9.66□□□□□ -0.86
SF3B3-208ENST00000567250 VSTM2AQ8TAG5 236 aa9.66□□□□□ -0.86
SF3B3-208ENST00000567250 WFDC12Q8WWY7 111 aa9.66□□□□□ -0.86
SF3B3-208ENST00000567250 SCGB3A2Q96PL1 93 aa9.66□□□□□ -0.86
SF3B3-208ENST00000567250 GON7Q9BXV9 100 aa9.66□□□□□ -0.86
SF3B3-208ENST00000567250 SLC2A9Q9NRM0 540 aa9.66□□□□□ -0.86
SF3B3-208ENST00000567250 PLSCR3Q9NRY6 295 aa9.66□□□□□ -0.86
SF3B3-208ENST00000567250 SERTAD4Q9NUC0 356 aa9.66□□□□□ -0.86
SF3B3-208ENST00000567250 C14orf166Q9Y224 244 aaKnown RBP9.66□□□□□ -0.86
SF3B3-208ENST00000567250 STAB1Q9NY15 2570 aa9.66□□□□□ -0.86
SF3B3-208ENST00000567250 SLC25A17O43808 307 aa9.65□□□□□ -0.86
SF3B3-208ENST00000567250 HRASP01112 189 aa9.65□□□□□ -0.86
SF3B3-208ENST00000567250 CNTFRP26992 372 aa9.65□□□□□ -0.86
SF3B3-208ENST00000567250 RPL30P62888 115 aaKnown RBP9.65□□□□□ -0.86
SF3B3-208ENST00000567250 SLC35B1P78383 322 aa9.65□□□□□ -0.86
SF3B3-208ENST00000567250 KLF9Q13886 244 aaPredicted RBP9.65□□□□□ -0.86
SF3B3-208ENST00000567250 PSG5Q15238 335 aa9.65□□□□□ -0.86
SF3B3-208ENST00000567250 LIN54Q6MZP7 749 aa9.65□□□□□ -0.86
SF3B3-208ENST00000567250 SHISA2Q6UWI4 295 aa9.65□□□□□ -0.86
SF3B3-208ENST00000567250 SPAG16Q8N0X2 631 aa9.65□□□□□ -0.86
SF3B3-208ENST00000567250 KLHDC1Q8N7A1 406 aa9.65□□□□□ -0.86
SF3B3-208ENST00000567250 CHPT1Q8WUD6 406 aa9.65□□□□□ -0.86
SF3B3-208ENST00000567250 ZNF747Q9BV97 191 aa9.65□□□□□ -0.86
SF3B3-208ENST00000567250 WDR12Q9GZL7 423 aaKnown RBP9.65□□□□□ -0.86
SF3B3-208ENST00000567250 FBXL15Q9H469 300 aa9.65□□□□□ -0.86
SF3B3-208ENST00000567250 FAM212BQ9NTI7 297 aaPredicted RBP9.65□□□□□ -0.86
SF3B3-208ENST00000567250 ZNF580Q9UK33 172 aa9.65□□□□□ -0.86
SF3B3-208ENST00000567250 SIGLEC9Q9Y336 463 aa9.65□□□□□ -0.86
SF3B3-208ENST00000567250 NAP1L6A6NFF2 107 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 SH2D7A6NKC9 451 aaPredicted RBP9.64□□□□□ -0.87
SF3B3-208ENST00000567250 CENPXA8MT69 81 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 PGLYRP1O75594 196 aaPredicted RBP9.64□□□□□ -0.87
SF3B3-208ENST00000567250 HPRT1P00492 218 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 CTSDP07339 412 aaPredicted RBP9.64□□□□□ -0.87
SF3B3-208ENST00000567250 ZNF735P0CB33 412 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 VSIG10L2P0DP72 767 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 F2RP25116 425 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 UBE2KP61086 200 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 RND3P61587 244 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms