RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 DCTN5Q9BTE1 182 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 FUT9Q9Y231 359 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 CFAP47Q6ZTR5 3102 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 TRAV38-1A0A0B4J264 116 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 PMS2P5A8MQ11 134 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 ZNF705GA8MUZ8 300 aaPredicted RBP11.91□□□□□ -0.5
CDH1-209ENST00000566510 C17orf112F2Z3M2 114 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 TIMM8AO60220 97 aaPredicted RBP11.91□□□□□ -0.5
CDH1-209ENST00000566510 HOXC12P31275 282 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 CDC34P49427 236 aaPredicted RBP11.91□□□□□ -0.5
CDH1-209ENST00000566510 EDDM3BP56851 147 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 PKIAP61925 76 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 GABRA6Q16445 453 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 SLC35E4Q6ICL7 350 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 DHRS13Q6UX07 377 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 UNQ6494/PRO21346Q6UXR6 183 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 OR13A1Q8NGR1 328 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 NEIL1Q96FI4 390 aaPredicted RBP11.91□□□□□ -0.5
CDH1-209ENST00000566510 MEGF10Q96KG7 1140 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 TRIB1Q96RU8 372 aa11.91□□□□□ -0.5
CDH1-209ENST00000566510 A0A087X0M5 115 aa11.9□□□□□ -0.5
CDH1-209ENST00000566510 A0A1B0GX30 115 aa11.9□□□□□ -0.5
CDH1-209ENST00000566510 TMEM210A6NLX4 147 aa11.9□□□□□ -0.5
CDH1-209ENST00000566510 HRASP01112 189 aa11.9□□□□□ -0.5
CDH1-209ENST00000566510 DDTP30046 118 aa11.9□□□□□ -0.5
CDH1-209ENST00000566510 FAM3BP58499 235 aaPredicted RBP11.9□□□□□ -0.5
CDH1-209ENST00000566510 ALKBH2Q6NS38 261 aa11.9□□□□□ -0.5
CDH1-209ENST00000566510 GMPPAQ96IJ6 420 aaPredicted RBP11.9□□□□□ -0.5
CDH1-209ENST00000566510 QTRT1Q9BXR0 403 aaKnown RBP11.9□□□□□ -0.5
CDH1-209ENST00000566510 PRO3102Q9H379 93 aa11.9□□□□□ -0.5
CDH1-209ENST00000566510 AMBPP02760 352 aa11.9□□□□□ -0.5
CDH1-209ENST00000566510 P0C879 139 aa11.9□□□□□ -0.5
CDH1-209ENST00000566510 PMS2P11Q13670 270 aa11.9□□□□□ -0.5
CDH1-209ENST00000566510 ACP7Q6ZNF0 438 aa11.9□□□□□ -0.5
CDH1-209ENST00000566510 OR2T10Q8NGZ9 312 aa11.9□□□□□ -0.5
CDH1-209ENST00000566510 SPENQ96T58 3664 aaKnown RBP11.89□□□□□ -0.51
CDH1-209ENST00000566510 J3QW42 95 aa11.89□□□□□ -0.51
CDH1-209ENST00000566510 RAB29O14966 203 aa11.89□□□□□ -0.51
CDH1-209ENST00000566510 IFNA10P01566 189 aa11.89□□□□□ -0.51
CDH1-209ENST00000566510 ACOT6Q3I5F7 207 aaPredicted RBP11.89□□□□□ -0.51
CDH1-209ENST00000566510 ZNF600Q6ZNG1 722 aa11.89□□□□□ -0.51
CDH1-209ENST00000566510 C11orf53Q8IXP5 236 aa11.89□□□□□ -0.51
CDH1-209ENST00000566510 TAAR6Q96RI8 345 aa11.89□□□□□ -0.51
CDH1-209ENST00000566510 WASF3Q9UPY6 502 aa11.89□□□□□ -0.51
CDH1-209ENST00000566510 A0A1W2PPV4 95 aa11.89□□□□□ -0.51
CDH1-209ENST00000566510 GALR2O43603 387 aaPredicted RBP11.89□□□□□ -0.51
CDH1-209ENST00000566510 FCGR3BO75015 233 aa11.89□□□□□ -0.51
CDH1-209ENST00000566510 DBX2Q6ZNG2 339 aa11.89□□□□□ -0.51
CDH1-209ENST00000566510 VKORC1L1Q8N0U8 176 aa11.89□□□□□ -0.51
CDH1-209ENST00000566510 R3HDM4Q96D70 268 aa11.89□□□□□ -0.51
CDH1-209ENST00000566510 PATZ1Q9HBE1 687 aaKnown RBP11.89□□□□□ -0.51
CDH1-209ENST00000566510 HES4Q9HCC6 221 aa11.89□□□□□ -0.51
CDH1-209ENST00000566510 BOD1L1Q8NFC6 3051 aa11.89□□□□□ -0.51
CDH1-209ENST00000566510 CD1BP29016 333 aa11.88□□□□□ -0.51
CDH1-209ENST00000566510 EIF4EBP1Q13541 118 aaPredicted RBP11.88□□□□□ -0.51
CDH1-209ENST00000566510 PRSS8Q16651 343 aa11.88□□□□□ -0.51
CDH1-209ENST00000566510 WDR82Q6UXN9 313 aa11.88□□□□□ -0.51
CDH1-209ENST00000566510 ANAPC16Q96DE5 110 aa11.88□□□□□ -0.51
CDH1-209ENST00000566510 CXXC4Q9H2H0 198 aa11.88□□□□□ -0.51
CDH1-209ENST00000566510 CADP27708 2225 aa11.88□□□□□ -0.51
CDH1-209ENST00000566510 GZMBP10144 247 aa11.88□□□□□ -0.51
CDH1-209ENST00000566510 FAM78BQ5VT40 261 aa11.88□□□□□ -0.51
CDH1-209ENST00000566510 TGIF2LYQ8IUE0 185 aa11.88□□□□□ -0.51
CDH1-209ENST00000566510 PYGO2Q9BRQ0 406 aa11.88□□□□□ -0.51
CDH1-209ENST00000566510 TMEM204Q9BSN7 226 aa11.88□□□□□ -0.51
CDH1-209ENST00000566510 GNG12Q9UBI6 72 aa11.88□□□□□ -0.51
CDH1-209ENST00000566510 INTS1Q8N201 2190 aaKnown RBP11.87□□□□□ -0.51
CDH1-209ENST00000566510 PGPEP1LA6NFU8 196 aa11.87□□□□□ -0.51
CDH1-209ENST00000566510 SPINT2O43291 252 aa11.87□□□□□ -0.51
CDH1-209ENST00000566510 NDUFB4O95168 129 aa11.87□□□□□ -0.51
CDH1-209ENST00000566510 OR9G9P0C7N8 305 aa11.87□□□□□ -0.51
CDH1-209ENST00000566510 NPPCP23582 126 aa11.87□□□□□ -0.51
CDH1-209ENST00000566510 GPR12P47775 334 aa11.87□□□□□ -0.51
CDH1-209ENST00000566510 ATP5G3P48201 142 aa11.87□□□□□ -0.51
CDH1-209ENST00000566510 PRAMEF5Q5TYX0 476 aa11.87□□□□□ -0.51
CDH1-209ENST00000566510 KCNIP4Q6PIL6 250 aa11.87□□□□□ -0.51
CDH1-209ENST00000566510 HSD17B10Q99714 261 aaKnown RBP11.87□□□□□ -0.51
CDH1-209ENST00000566510 DERL1Q9BUN8 251 aa11.87□□□□□ -0.51
CDH1-209ENST00000566510 MRPL37Q9BZE1 423 aaKnown RBP11.87□□□□□ -0.51
CDH1-209ENST00000566510 HEYLQ9NQ87 328 aaPredicted RBP11.87□□□□□ -0.51
CDH1-209ENST00000566510 C19orf67A6NJJ6 358 aa11.87□□□□□ -0.51
CDH1-209ENST00000566510 PCNX2A6NKB5 2137 aa11.87□□□□□ -0.51
CDH1-209ENST00000566510 C15orf62A8K5M9 175 aa11.87□□□□□ -0.51
CDH1-209ENST00000566510 NUBP1P53384 320 aa11.87□□□□□ -0.51
CDH1-209ENST00000566510 FOXF2Q12947 444 aa11.87□□□□□ -0.51
CDH1-209ENST00000566510 INO80CQ6PI98 192 aaPredicted RBP11.87□□□□□ -0.51
CDH1-209ENST00000566510 TMEM178AQ8NBL3 297 aa11.87□□□□□ -0.51
CDH1-209ENST00000566510 HNF1AP20823 631 aa11.86□□□□□ -0.51
CDH1-209ENST00000566510 GNB2P62879 340 aa11.86□□□□□ -0.51
CDH1-209ENST00000566510 JOSD1Q15040 202 aaPredicted RBP11.86□□□□□ -0.51
CDH1-209ENST00000566510 SMIM21Q3B7S5 101 aa11.86□□□□□ -0.51
CDH1-209ENST00000566510 FAM214BQ7L5A3 538 aa11.86□□□□□ -0.51
CDH1-209ENST00000566510 OR4A16Q8NH70 328 aa11.86□□□□□ -0.51
CDH1-209ENST00000566510 WFIKKN1Q96NZ8 548 aa11.86□□□□□ -0.51
CDH1-209ENST00000566510 A0A1B0GV90 55 aa11.86□□□□□ -0.51
CDH1-209ENST00000566510 DVL1O14640 695 aa11.86□□□□□ -0.51
CDH1-209ENST00000566510 SOX15O60248 233 aa11.86□□□□□ -0.51
CDH1-209ENST00000566510 WISP2O76076 250 aa11.86□□□□□ -0.51
CDH1-209ENST00000566510 ZNF883P0CG24 379 aa11.86□□□□□ -0.51
CDH1-209ENST00000566510 GCH1P30793 250 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms