RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SUPT4H1P63272 117 aaKnown RBP10.26□□□□□ -0.77
SF3B3-206ENST00000565990 SMCO1Q147U7 214 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 HERPUD1Q15011 391 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 MIDNQ504T8 468 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 Q71RC1 249 aaPredicted RBP10.26□□□□□ -0.77
SF3B3-206ENST00000565990 SGPP2Q8IWX5 399 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 PNKDQ8N490 385 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 LINC00311Q8N616 119 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 OR9G1Q8NH87 305 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 AJUBAQ96IF1 538 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 YPEL2Q96QA6 119 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 SUCNR1Q9BXA5 334 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 CLEC7AQ9BXN2 247 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 ZNF286AQ9HBT8 521 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 CYTL1Q9NRR1 136 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 GFOD1Q9NXC2 390 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 JPT1Q9UK76 154 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 CDC42EP3Q9UKI2 254 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 PSG11Q9UQ72 335 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 NIPBLQ6KC79 2804 aaeCLIP10.26□□□□□ -0.77
SF3B3-206ENST00000565990 SONP18583 2426 aaKnown RBP10.25□□□□□ -0.77
SF3B3-206ENST00000565990 TMEM218A2RU14 115 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 CRYM-AS1A6NIL9 109 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 INAFM1C9JVW0 142 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 J3QR06 171 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 SDCBPO00560 298 aaPredicted RBP10.25□□□□□ -0.77
SF3B3-206ENST00000565990 TOR1AO14656 332 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 ITGB1BP1O14713 200 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 CRLF1O75462 422 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 JTBO76095 146 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 CTXN2P0C2S0 81 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 NFYBP25208 207 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 PRRX1P54821 245 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 FLI1Q01543 452 aaPredicted RBP10.25□□□□□ -0.77
SF3B3-206ENST00000565990 PRB3Q04118 309 aaPredicted RBP10.25□□□□□ -0.77
SF3B3-206ENST00000565990 BTN1A1Q13410 526 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 SMUG1Q53HV7 270 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 IGSF11Q5DX21 431 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 GPR157Q5UAW9 335 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 FAM53AQ6NSI3 398 aaPredicted RBP10.25□□□□□ -0.77
SF3B3-206ENST00000565990 DHRS11Q6UWP2 260 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 PRR18Q8N4B5 295 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 CLRN3Q8NCR9 226 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 ZNF439Q8NDP4 499 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 BEND2Q8NDZ0 799 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 OR52L2PQ8NGH6 319 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 UBALD1Q8TB05 177 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 MAFIPQ8WZ33 124 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 SMIM8Q96KF7 97 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 CABLES2Q9BTV7 478 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 SEC11CQ9BY50 192 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 NKX6-2Q9C056 277 aaPredicted RBP10.25□□□□□ -0.77
SF3B3-206ENST00000565990 PRDM13Q9H4Q3 707 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 NECAP2Q9NVZ3 263 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 KCNIP3Q9Y2W7 256 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 NAV3Q8IVL0 2385 aa10.25□□□□□ -0.77
SF3B3-206ENST00000565990 C13orf42A0A1B0GVH6 325 aa10.24□□□□□ -0.77
SF3B3-206ENST00000565990 LY6LH3BQJ8 138 aa10.24□□□□□ -0.77
SF3B3-206ENST00000565990 NPFFO15130 113 aa10.24□□□□□ -0.77
SF3B3-206ENST00000565990 APOC3P02656 99 aa10.24□□□□□ -0.77
SF3B3-206ENST00000565990 ATF4P18848 351 aaPredicted RBP10.24□□□□□ -0.77
SF3B3-206ENST00000565990 HNF1AP20823 631 aa10.24□□□□□ -0.77
SF3B3-206ENST00000565990 CEACAM6P40199 344 aa10.24□□□□□ -0.77
SF3B3-206ENST00000565990 SRPXP78539 464 aa10.24□□□□□ -0.77
SF3B3-206ENST00000565990 PJVKQ0ZLH3 352 aa10.24□□□□□ -0.77
SF3B3-206ENST00000565990 KLRD1Q13241 179 aa10.24□□□□□ -0.77
SF3B3-206ENST00000565990 LRRC37A5PQ49AS3 106 aa10.24□□□□□ -0.77
SF3B3-206ENST00000565990 CT45A1Q5HYN5 189 aa10.24□□□□□ -0.77
SF3B3-206ENST00000565990 LDLRAD2Q5SZI1 272 aa10.24□□□□□ -0.77
SF3B3-206ENST00000565990 PXDC1Q5TGL8 231 aa10.24□□□□□ -0.77
SF3B3-206ENST00000565990 BPIFCQ8NFQ6 507 aa10.24□□□□□ -0.77
SF3B3-206ENST00000565990 CT45A3Q8NHU0 189 aa10.24□□□□□ -0.77
SF3B3-206ENST00000565990 ABHD14BQ96IU4 210 aa10.24□□□□□ -0.77
SF3B3-206ENST00000565990 SLC5A7Q9GZV3 580 aa10.24□□□□□ -0.77
SF3B3-206ENST00000565990 TEP1Q99973 2627 aaKnown RBP10.23□□□□□ -0.77
SF3B3-206ENST00000565990 IGHV3-43A0A0B4J1X8 118 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 TRAV40A0A0B4J280 105 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 H0YIZ8 118 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 BUB1B-PAK6H3BSN5 160 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 DNASE2O00115 360 aaPredicted RBP10.23□□□□□ -0.77
SF3B3-206ENST00000565990 TSPAN4O14817 238 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 SNAPINO95295 136 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 IGHV3-43DP0DP04 118 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 SULT1A2P50226 295 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 LTC4SQ16873 150 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 ANKRD55Q3KP44 614 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 SLC25A48Q6ZT89 311 aaKnown RBP10.23□□□□□ -0.77
SF3B3-206ENST00000565990 IL17RELQ6ZVW7 336 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 FAM71E2Q8N5Q1 922 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 CCDC71LQ8N9Z2 235 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 OR4P4Q8NGL7 312 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 OR1S2Q8NGQ3 325 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 OR10J5Q8NHC4 309 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 IL1F10Q8WWZ1 152 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 LEAP2Q969E1 77 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 MALSU1Q96EH3 234 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 AGMATQ9BSE5 352 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 PARP11Q9NR21 331 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 GNG12Q9UBI6 72 aa10.23□□□□□ -0.77
SF3B3-206ENST00000565990 GAB2Q9UQC2 676 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms