RNA–Protein interactions for RNA: ENST00000565970.5

SCAPER-216, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,388 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-216	ENST00000565970	WNK2	Q9Y3S1	2297 aa		13.74	□□□□□ -0.21
SCAPER-216	ENST00000565970	NBPF19	A0A087WUL8	3843 aa		13.74	□□□□□ -0.21
SCAPER-216	ENST00000565970	HPRT1	P00492	218 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	ARG1	P05089	322 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970		P0C879	139 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	PAX6	P26367	422 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	PRSS54	Q6PEW0	395 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	OR13D1	Q8NGV5	346 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	ADTRP	Q96IZ2	230 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	SPIN2A	Q99865	258 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	SPIN2B	Q9BPZ2	258 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	NABP2	Q9BQ15	211 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	MFF	Q9GZY8	342 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	SLC35D1	Q9NTN3	355 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	TNFSF18	Q9UNG2	199 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	NSG2	Q9Y328	171 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	MMP24	Q9Y5R2	645 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	IGHV3-72	A0A0B4J1Y9	119 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970		A0A1B0GU03	582 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	MARCH11	A6NNE9	402 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	PITX3	O75364	302 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	ZNF137P	P52743	207 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	DSCR9	P59020	149 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	POLR2G	P62487	172 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	SMCO1	Q147U7	214 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	KIR3DL3	Q8N743	410 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	BEND2	Q8NDZ0	799 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	PLEKHA2	Q9HB19	425 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	KPTN	Q9Y664	436 aa		13.73	□□□□□ -0.21
SCAPER-216	ENST00000565970	RNF222	A6NCQ9	220 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	RNASEK-C17orf49	H0YIS7	233 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970		L7N2F9	121 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	DEDD	O75618	318 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	MMP9	P14780	707 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	NKX2-1	P43699	371 aa	Predicted RBP	13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	DVL1P1	P54792	670 aa	Predicted RBP	13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	IFITM2	Q01629	132 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	TMEM65	Q6PI78	240 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	TGIF2LX	Q8IUE1	241 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	OR4S2	Q8NH73	311 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	RCL1	Q9Y2P8	373 aa	Known RBP	13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	MSGN1	A6NI15	193 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970		H0YJW9	148 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	TOX4	O94842	621 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	HOXB4	P17483	251 aa	Predicted RBP	13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	KIR2DS2	P43631	304 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	C1orf122	Q6ZSJ8	110 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	LHFPL4	Q7Z7J7	247 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	MAPK1IP1L	Q8NDC0	245 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	DMBX1	Q8NFW5	382 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	OR11H6	Q8NGC7	330 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	TBX15	Q96SF7	602 aa		13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970	BEX4	Q9NWD9	120 aa	Predicted RBP	13.72	□□□□□ -0.21
SCAPER-216	ENST00000565970		H7C2Y5	167 aa		13.71	□□□□□ -0.21
SCAPER-216	ENST00000565970	ST8SIA3	O43173	380 aa		13.71	□□□□□ -0.21
SCAPER-216	ENST00000565970	OR9G9	P0C7N8	305 aa		13.71	□□□□□ -0.21
SCAPER-216	ENST00000565970	LYL1	P12980	280 aa		13.71	□□□□□ -0.21
SCAPER-216	ENST00000565970	H2BFWT	Q7Z2G1	175 aa		13.71	□□□□□ -0.21
SCAPER-216	ENST00000565970	HEXA-AS1	Q9H8Q6	139 aa		13.71	□□□□□ -0.21
SCAPER-216	ENST00000565970	POMT1	Q9Y6A1	747 aa		13.71	□□□□□ -0.21
SCAPER-216	ENST00000565970	TRAV3	A0A0B4J244	114 aa		13.71	□□□□□ -0.22
SCAPER-216	ENST00000565970	SRRM4	A7MD48	611 aa	Known RBP	13.71	□□□□□ -0.22
SCAPER-216	ENST00000565970	LY6L	H3BQJ8	138 aa		13.71	□□□□□ -0.22
SCAPER-216	ENST00000565970	USF1	P22415	310 aa	Predicted RBP	13.71	□□□□□ -0.22
SCAPER-216	ENST00000565970	IL3RA	P26951	378 aa		13.71	□□□□□ -0.22
SCAPER-216	ENST00000565970	TAGLN	Q01995	201 aa	Known RBP	13.71	□□□□□ -0.22
SCAPER-216	ENST00000565970	ID3	Q02535	119 aa		13.71	□□□□□ -0.22
SCAPER-216	ENST00000565970	MIDN	Q504T8	468 aa		13.71	□□□□□ -0.22
SCAPER-216	ENST00000565970	OR5AN1	Q8NGI8	311 aa		13.71	□□□□□ -0.22
SCAPER-216	ENST00000565970	SLC25A6	P12236	298 aa		13.7	□□□□□ -0.22
SCAPER-216	ENST00000565970	TMUB2	Q71RG4	321 aa		13.7	□□□□□ -0.22
SCAPER-216	ENST00000565970	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.7	□□□□□ -0.22
SCAPER-216	ENST00000565970	INSIG2	Q9Y5U4	225 aa		13.7	□□□□□ -0.22
SCAPER-216	ENST00000565970	NAV2	Q8IVL1	2488 aa		13.7	□□□□□ -0.22
SCAPER-216	ENST00000565970		A0A096LNT2	108 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	SSSCA1	O60232	199 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	RLN2	P04090	185 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	NQO2	P16083	231 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	RTL8B	Q17RB0	113 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	FAM71F2	Q6NXP2	309 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	C17orf50	Q8WW18	174 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	LHX4	Q969G2	390 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	RITA1	Q96K30	269 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	ARL6	Q9H0F7	186 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	UNKL	Q9H9P5	680 aa	Known RBP	13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	HILPDA	Q9Y5L2	63 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	PIGBOS1	A0A0B4J2F0	54 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	ODF3B	A8MYP8	253 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	TMEM50A	O95807	157 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	PET100	P0DJ07	73 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	SLC25A16	P16260	332 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	OR2B8P	P59922	312 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	OPCML	Q14982	345 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	CLEC9A	Q6UXN8	241 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	MOB3B	Q86TA1	216 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	RPE	Q96AT9	228 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	TMEM140	Q9NV12	185 aa		13.69	□□□□□ -0.22
SCAPER-216	ENST00000565970	IGHV1-3	A0A0C4DH29	117 aa		13.68	□□□□□ -0.22
SCAPER-216	ENST00000565970	CHST1	O43916	411 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms