RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 LINC00473A8K010 186 aa12.04□□□□□ -0.48
CDH3-204ENST00000565453 SHOXO15266 292 aa12.04□□□□□ -0.48
CDH3-204ENST00000565453 CNIH1O95406 144 aa12.04□□□□□ -0.48
CDH3-204ENST00000565453 BRI3O95415 125 aa12.04□□□□□ -0.48
CDH3-204ENST00000565453 TRGV3P03979 118 aa12.04□□□□□ -0.48
CDH3-204ENST00000565453 RRASP10301 218 aa12.04□□□□□ -0.48
CDH3-204ENST00000565453 CD40LGP29965 261 aa12.04□□□□□ -0.48
CDH3-204ENST00000565453 RTL8BQ17RB0 113 aa12.04□□□□□ -0.48
CDH3-204ENST00000565453 HACD4Q5VWC8 232 aa12.04□□□□□ -0.48
CDH3-204ENST00000565453 TPRA1Q86W33 373 aa12.04□□□□□ -0.48
CDH3-204ENST00000565453 OR5T1Q8NG75 326 aa12.04□□□□□ -0.48
CDH3-204ENST00000565453 ADTRPQ96IZ2 230 aa12.04□□□□□ -0.48
CDH3-204ENST00000565453 TMEM68Q96MH6 324 aa12.04□□□□□ -0.48
CDH3-204ENST00000565453 RBM7Q9Y580 266 aaKnown RBP12.04□□□□□ -0.48
CDH3-204ENST00000565453 LY86O95711 162 aa12.03□□□□□ -0.48
CDH3-204ENST00000565453 SPNP16150 400 aa12.03□□□□□ -0.48
CDH3-204ENST00000565453 CBX3Q13185 183 aa12.03□□□□□ -0.48
CDH3-204ENST00000565453 SFXN4Q6P4A7 337 aa12.03□□□□□ -0.48
CDH3-204ENST00000565453 TEX45Q8NA69 505 aa12.03□□□□□ -0.48
CDH3-204ENST00000565453 LGALS14Q8TCE9 139 aa12.03□□□□□ -0.48
CDH3-204ENST00000565453 OR51E2Q9H255 320 aa12.03□□□□□ -0.48
CDH3-204ENST00000565453 DCSTAMPQ9H295 470 aa12.03□□□□□ -0.48
CDH3-204ENST00000565453 Q9H521 79 aa12.03□□□□□ -0.48
CDH3-204ENST00000565453 SSR3Q9UNL2 185 aa12.03□□□□□ -0.48
CDH3-204ENST00000565453 U3KQK5 164 aa12.03□□□□□ -0.48
CDH3-204ENST00000565453 TMEM235A6NFC5 223 aa12.02□□□□□ -0.49
CDH3-204ENST00000565453 SSX5O60225 188 aa12.02□□□□□ -0.49
CDH3-204ENST00000565453 IGLV2-14P01704 120 aa12.02□□□□□ -0.49
CDH3-204ENST00000565453 HLA-DQB1P01920 261 aa12.02□□□□□ -0.49
CDH3-204ENST00000565453 UBE2KP61086 200 aa12.02□□□□□ -0.49
CDH3-204ENST00000565453 PRSS8Q16651 343 aa12.02□□□□□ -0.49
CDH3-204ENST00000565453 ZNF773Q6PK81 442 aa12.02□□□□□ -0.49
CDH3-204ENST00000565453 ZNF645Q8N7E2 425 aa12.02□□□□□ -0.49
CDH3-204ENST00000565453 NUDCD2Q8WVJ2 157 aa12.02□□□□□ -0.49
CDH3-204ENST00000565453 ASCL2Q99929 193 aa12.02□□□□□ -0.49
CDH3-204ENST00000565453 ST6GALNAC5Q9BVH7 336 aa12.02□□□□□ -0.49
CDH3-204ENST00000565453 ZNF355PQ9NSJ1 428 aa12.02□□□□□ -0.49
CDH3-204ENST00000565453 DAPK2Q9UIK4 370 aa12.02□□□□□ -0.49
CDH3-204ENST00000565453 RRP15Q9Y3B9 282 aaKnown RBP12.02□□□□□ -0.49
CDH3-204ENST00000565453 OR2W1Q9Y3N9 320 aa12.02□□□□□ -0.49
CDH3-204ENST00000565453 SMAD5-AS1Q9Y6J3 95 aa12.02□□□□□ -0.49
CDH3-204ENST00000565453 RBMXL2O75526 392 aaKnown RBP12.01□□□□□ -0.49
CDH3-204ENST00000565453 CRYZL1O95825 349 aa12.01□□□□□ -0.49
CDH3-204ENST00000565453 CTXN2P0C2S0 81 aa12.01□□□□□ -0.49
CDH3-204ENST00000565453 CLEC2LP0C7M8 214 aa12.01□□□□□ -0.49
CDH3-204ENST00000565453 GP9P14770 177 aa12.01□□□□□ -0.49
CDH3-204ENST00000565453 NFYAP23511 347 aaPredicted RBP12.01□□□□□ -0.49
CDH3-204ENST00000565453 SDC2P34741 201 aa12.01□□□□□ -0.49
CDH3-204ENST00000565453 PITPNAQ00169 270 aa12.01□□□□□ -0.49
CDH3-204ENST00000565453 VMA21Q3ZAQ7 101 aa12.01□□□□□ -0.49
CDH3-204ENST00000565453 OR6Q1Q8NGQ2 317 aa12.01□□□□□ -0.49
CDH3-204ENST00000565453 OSR1Q8TAX0 266 aaPredicted RBP12.01□□□□□ -0.49
CDH3-204ENST00000565453 TINAGL1Q9GZM7 467 aaPredicted RBP12.01□□□□□ -0.49
CDH3-204ENST00000565453 RNF167Q9H6Y7 350 aa12.01□□□□□ -0.49
CDH3-204ENST00000565453 RANGRFQ9HD47 186 aaPredicted RBP12.01□□□□□ -0.49
CDH3-204ENST00000565453 IGKV1D-13A0A0B4J2D9 117 aa12□□□□□ -0.49
CDH3-204ENST00000565453 A0A0G2JLM5 398 aa12□□□□□ -0.49
CDH3-204ENST00000565453 C13orf42A0A1B0GVH6 325 aa12□□□□□ -0.49
CDH3-204ENST00000565453 MSGN1A6NI15 193 aa12□□□□□ -0.49
CDH3-204ENST00000565453 J3QRK9 145 aa12□□□□□ -0.49
CDH3-204ENST00000565453 SCGNO76038 276 aa12□□□□□ -0.49
CDH3-204ENST00000565453 IGKV1-13P0DP09 117 aa12□□□□□ -0.49
CDH3-204ENST00000565453 RPL30P62888 115 aaKnown RBP12□□□□□ -0.49
CDH3-204ENST00000565453 DEFA5Q01523 94 aa12□□□□□ -0.49
CDH3-204ENST00000565453 EIF4EBP1Q13541 118 aaPredicted RBP12□□□□□ -0.49
CDH3-204ENST00000565453 DYRK1AQ13627 763 aa12□□□□□ -0.49
CDH3-204ENST00000565453 CNIH2Q6PI25 160 aa12□□□□□ -0.49
CDH3-204ENST00000565453 IDO2Q6ZQW0 420 aa12□□□□□ -0.49
CDH3-204ENST00000565453 OR5H6Q8NGV6 325 aa12□□□□□ -0.49
CDH3-204ENST00000565453 SLC25A38Q96DW6 304 aa12□□□□□ -0.49
CDH3-204ENST00000565453 RHBDL2Q9NX52 303 aa12□□□□□ -0.49
CDH3-204ENST00000565453 RBMX2Q9Y388 322 aaKnown RBP12□□□□□ -0.49
CDH3-204ENST00000565453 SORL1Q92673 2214 aa11.99□□□□□ -0.49
CDH3-204ENST00000565453 TUSC2O75896 110 aa11.99□□□□□ -0.49
CDH3-204ENST00000565453 SAA1P0DJI8 122 aaPredicted RBP11.99□□□□□ -0.49
CDH3-204ENST00000565453 ZP3P21754 424 aa11.99□□□□□ -0.49
CDH3-204ENST00000565453 AADACP22760 399 aa11.99□□□□□ -0.49
CDH3-204ENST00000565453 SCAND1P57086 179 aa11.99□□□□□ -0.49
CDH3-204ENST00000565453 GNG2P59768 71 aa11.99□□□□□ -0.49
CDH3-204ENST00000565453 KLF5Q13887 457 aaPredicted RBP11.99□□□□□ -0.49
CDH3-204ENST00000565453 TNXAQ16473 311 aa11.99□□□□□ -0.49
CDH3-204ENST00000565453 ZNF343Q6P1L6 599 aa11.99□□□□□ -0.49
CDH3-204ENST00000565453 OVCH2Q7RTZ1 564 aa11.99□□□□□ -0.49
CDH3-204ENST00000565453 HAPLN4Q86UW8 402 aa11.99□□□□□ -0.49
CDH3-204ENST00000565453 ADAD2Q8NCV1 583 aaKnown RBP11.99□□□□□ -0.49
CDH3-204ENST00000565453 SRSF12Q8WXF0 261 aaKnown RBP11.99□□□□□ -0.49
CDH3-204ENST00000565453 OR4C12Q96R67 309 aa11.99□□□□□ -0.49
CDH3-204ENST00000565453 ANXA10Q9UJ72 324 aa11.99□□□□□ -0.49
CDH3-204ENST00000565453 KMT2CQ8NEZ4 4911 aaKnown RBP11.98□□□□□ -0.49
CDH3-204ENST00000565453 ANKRD34BA5PLL1 514 aa11.98□□□□□ -0.49
CDH3-204ENST00000565453 TRIM64CA6NLI5 447 aa11.98□□□□□ -0.49
CDH3-204ENST00000565453 SLC22A5O76082 557 aa11.98□□□□□ -0.49
CDH3-204ENST00000565453 IGLV1-51P01701 117 aa11.98□□□□□ -0.49
CDH3-204ENST00000565453 TRBV12-3P01733 135 aa11.98□□□□□ -0.49
CDH3-204ENST00000565453 APELAP0DMC3 54 aa11.98□□□□□ -0.49
CDH3-204ENST00000565453 MXD1Q05195 221 aa11.98□□□□□ -0.49
CDH3-204ENST00000565453 CDK10Q15131 360 aa11.98□□□□□ -0.49
CDH3-204ENST00000565453 IL34Q6ZMJ4 242 aa11.98□□□□□ -0.49
CDH3-204ENST00000565453 KCTD9Q7L273 389 aa11.98□□□□□ -0.49
CDH3-204ENST00000565453 SBSPONQ8IVN8 264 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms