RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 GLYATL2Q8WU03 294 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 NABP2Q9BQ15 211 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 SHPKQ9UHJ6 478 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 PRELID3BQ9Y3B1 194 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 TBL2Q9Y4P3 447 aaKnown RBP8.97□□□□□ -0.97
SF3B3-205ENST00000564899 MINOS1-NBL1R4GNA1 71 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 PRKDCP78527 4128 aaKnown RBP8.97□□□□□ -0.97
SF3B3-205ENST00000564899 IGHV3OR16-10A0A075B7F0 116 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 HMX3A6NHT5 357 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 LY6LH3BQJ8 138 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 GOSR2O14653 212 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 NPFFO15130 113 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 APOA2P02652 100 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 GAPDHP04406 335 aaKnown RBP8.96□□□□□ -0.98
SF3B3-205ENST00000564899 TRAPPC2P0DI81 140 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 TRAPPC2BP0DI82 140 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 KIR2DS2P43631 304 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 ZNF816Q0VGE8 651 aaPredicted RBP8.96□□□□□ -0.98
SF3B3-205ENST00000564899 LDLRAD2Q5SZI1 272 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 GPR157Q5UAW9 335 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 TMEM268Q5VZI3 342 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 ZNF695Q8IW36 515 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 LHFPL5Q8TAF8 219 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 CD300LFQ8TDQ1 290 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 DDB2Q92466 427 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 TMEM56Q96MV1 263 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 FAM212BQ9NTI7 297 aaPredicted RBP8.96□□□□□ -0.98
SF3B3-205ENST00000564899 SLC35D1Q9NTN3 355 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 MGAT4CQ9UBM8 478 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 CDC42EP3Q9UKI2 254 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 TMEM56-RWDD3S4R434 201 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 CMYA5Q8N3K9 4069 aa8.96□□□□□ -0.98
SF3B3-205ENST00000564899 WNK2Q9Y3S1 2297 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 IGHV1-69DA0A0B4J2H0 117 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 IGHV1-3A0A0C4DH29 117 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 RBFOX2O43251 390 aaKnown RBP eCLIP8.95□□□□□ -0.98
SF3B3-205ENST00000564899 RAMP3O60896 148 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 S1PR2O95136 353 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 CDS2O95674 445 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 AVPP01185 164 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 IGHV1-69P01742 117 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 SULT1A3P0DMM9 295 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 SULT1A4P0DMN0 295 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 IGHV4-38-2P0DP08 117 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 RPA2P15927 270 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 EPHA1P21709 976 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 SAA4P35542 130 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 LPAR6P43657 344 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 BRWD1-AS2P59051 145 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 RTL8BQ17RB0 113 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 MIDNQ504T8 468 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 ZNF585BQ52M93 769 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 RUSC1-AS1Q66K80 236 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 MOB3BQ86TA1 216 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 SELENOHQ8IZQ5 122 aaKnown RBP8.95□□□□□ -0.98
SF3B3-205ENST00000564899 LRTM2Q8N967 370 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 OR4S2Q8NH73 311 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 RBPMSQ93062 196 aaKnown RBP8.95□□□□□ -0.98
SF3B3-205ENST00000564899 IL22RA2Q969J5 263 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 HILPDAQ9Y5L2 63 aa8.95□□□□□ -0.98
SF3B3-205ENST00000564899 PIGBOS1A0A0B4J2F0 54 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 DUXBA0A1W2PPF3 345 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 A0A1W2PPI3 338 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 DBX1A6NMT0 343 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 OOSP1A8MZH6 123 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 H0YJW9 148 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 H7C2Y5 167 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 CCSO14618 274 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 ADAP1O75689 374 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 CRYZL1O95825 349 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 HOXB5P09067 269 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 RRASP10301 218 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 RAB13P51153 203 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 TAGLNQ01995 201 aaKnown RBP8.94□□□□□ -0.98
SF3B3-205ENST00000564899 SSX2Q16385 188 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 C2orf68Q2NKX9 166 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 DHRS7BQ6IAN0 325 aaPredicted RBP8.94□□□□□ -0.98
SF3B3-205ENST00000564899 CCDC144NLQ6NUI1 221 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 LYZL2Q7Z4W2 148 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 OR8H3Q8N146 312 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 PIP4P2Q8N4L2 257 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 SLC35G3Q8N808 338 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 OR11H7Q8NGC8 314 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 OR5AN1Q8NGI8 311 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 OR5M8Q8NGP6 311 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 CHAC2Q8WUX2 184 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 C17orf50Q8WW18 174 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 RAB18Q9NP72 206 aa8.94□□□□□ -0.98
SF3B3-205ENST00000564899 IGHV3-72A0A0B4J1Y9 119 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 FAM25EA8MYX2 175 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 TIMM23O14925 209 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 ATG12O94817 140 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 SIX6O95475 246 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 HPRT1P00492 218 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 IFNA21P01568 189 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 IGKV1-39P01597 117 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 IGKV1D-39P04432 117 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 CXCL3P19876 107 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 MC5RP33032 325 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 ARHGDIBP52566 201 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms