RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 CX3CL1P78423 397 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 TMEM267Q0VDI3 215 aaPredicted RBP7.8□□□□□ -1.16
CDH1-206ENST00000564676 FOXE3Q13461 319 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 ECSCRQ19T08 205 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 TMEM177Q53S58 311 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 KCTD9Q7L273 389 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 OR5H2Q8NGV7 314 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 GIMAP1Q8WWP7 306 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 HSD17B10Q99714 261 aaKnown RBP7.8□□□□□ -1.16
CDH1-206ENST00000564676 BCL7BQ9BQE9 202 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 SLC5A7Q9GZV3 580 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 SCPEP1Q9HB40 452 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 EXTL2Q9UBQ6 330 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 ZNF580Q9UK33 172 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 PRELID3BQ9Y3B1 194 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 A3GALT2U3KPV4 340 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 NBEAL1Q6ZS30 2694 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 SULT1C2O00338 296 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 RGS5O15539 181 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 CNIH1O95406 144 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 CA2P00918 260 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 IGHG4P01861 327 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 RPLP1P05386 114 aaKnown RBP7.79□□□□□ -1.16
CDH1-206ENST00000564676 NAT1P18440 290 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 HLA-DMAP28067 261 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 RFX2P48378 723 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 GNB1P62873 340 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 RPL30P62888 115 aaKnown RBP7.79□□□□□ -1.16
CDH1-206ENST00000564676 NDPQ00604 133 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 CFHR3Q02985 330 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 FXYD3Q14802 87 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 VMA21Q3ZAQ7 101 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 OR2B11Q5JQS5 317 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 TMEM65Q6PI78 240 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 ZNF562Q6V9R5 426 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 ZNF66Q6ZN08 573 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 LCNL1Q6ZST4 164 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 C18orf65Q6ZTR6 163 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 PPP1R27Q86WC6 154 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 TMEM17Q86X19 198 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 ZBTB34Q8NCN2 500 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 KLHL30-AS1Q8NEE0 82 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 GPX8Q8TED1 209 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 TCTEX1D2Q8WW35 142 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 DDB2Q92466 427 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 CCL28Q9NRJ3 127 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 TPSG1Q9NRR2 321 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 TAS2R8Q9NYW2 309 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 ADAM30Q9UKF2 790 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 ANAPC10Q9UM13 185 aa7.79□□□□□ -1.16
CDH1-206ENST00000564676 TNCP24821 2201 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 A0A1W2PN81 502 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 CCDC160A6NGH7 325 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 SRRM4A7MD48 611 aaKnown RBP7.78□□□□□ -1.16
CDH1-206ENST00000564676 TNFSF12O43508 249 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 IGLV2-14P01704 120 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 IGLV2-23P01705 113 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 CD33P20138 364 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 RCVRNP35243 200 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 HRH1P35367 487 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 CHRNA7P36544 502 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 DYRK1AQ13627 763 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 MSMO1Q15800 293 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 RNASE12Q5GAN4 147 aaKnown RBP7.78□□□□□ -1.16
CDH1-206ENST00000564676 UNQ5815/PRO19632Q6UWF5 114 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 C8orf86Q6ZUL3 223 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 OVCH2Q7RTZ1 564 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 C1QL4Q86Z23 238 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 ZNF695Q8IW36 515 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 LINC00528Q8N1L1 170 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 MFSD4AQ8N468 514 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 TCTEX1D1Q8N7M0 179 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 TEX45Q8NA69 505 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 GRPEL2Q8TAA5 225 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 OSR1Q8TAX0 266 aaPredicted RBP7.78□□□□□ -1.16
CDH1-206ENST00000564676 ARPC1AQ92747 370 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 GPHA2Q96T91 129 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 ZNF2Q9BSG1 426 aaPredicted RBP7.78□□□□□ -1.16
CDH1-206ENST00000564676 FAM103A1Q9BTL3 118 aaKnown RBP7.78□□□□□ -1.16
CDH1-206ENST00000564676 FBXO7Q9Y3I1 522 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 NUBP2Q9Y5Y2 271 aa7.78□□□□□ -1.16
CDH1-206ENST00000564676 CTDSP2O14595 271 aa7.77□□□□□ -1.17
CDH1-206ENST00000564676 CRYGBP07316 175 aa7.77□□□□□ -1.17
CDH1-206ENST00000564676 EGR2P11161 476 aaPredicted RBP7.77□□□□□ -1.17
CDH1-206ENST00000564676 PSMB8P28062 276 aa7.77□□□□□ -1.17
CDH1-206ENST00000564676 CD40LGP29965 261 aa7.77□□□□□ -1.17
CDH1-206ENST00000564676 PPIFP30405 207 aaKnown RBP7.77□□□□□ -1.17
CDH1-206ENST00000564676 SLC6A1P30531 599 aa7.77□□□□□ -1.17
CDH1-206ENST00000564676 MYCNOSP40205 109 aa7.77□□□□□ -1.17
CDH1-206ENST00000564676 KIR2DS2P43631 304 aa7.77□□□□□ -1.17
CDH1-206ENST00000564676 CDX1P47902 265 aaPredicted RBP7.77□□□□□ -1.17
CDH1-206ENST00000564676 UBE2KP61086 200 aa7.77□□□□□ -1.17
CDH1-206ENST00000564676 TSPAN5P62079 268 aa7.77□□□□□ -1.17
CDH1-206ENST00000564676 DEFA6Q01524 100 aa7.77□□□□□ -1.17
CDH1-206ENST00000564676 PJVKQ0ZLH3 352 aa7.77□□□□□ -1.17
CDH1-206ENST00000564676 EIF4EBP1Q13541 118 aaPredicted RBP7.77□□□□□ -1.17
CDH1-206ENST00000564676 ACTBL2Q562R1 376 aa7.77□□□□□ -1.17
CDH1-206ENST00000564676 DHRS11Q6UWP2 260 aa7.77□□□□□ -1.17
CDH1-206ENST00000564676 LYSMD2Q8IV50 215 aa7.77□□□□□ -1.17
CDH1-206ENST00000564676 RNF152Q8N8N0 203 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms