RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 DEFB136Q30KP8 78 aa14.31□□□□□ -0.12
SYNGR3-204ENST00000564642 AKIRIN2Q53H80 203 aa14.31□□□□□ -0.12
SYNGR3-204ENST00000564642 TMEM69Q5SWH9 247 aa14.31□□□□□ -0.12
SYNGR3-204ENST00000564642 ZNF491Q8N8L2 437 aa14.31□□□□□ -0.12
SYNGR3-204ENST00000564642 DDB2Q92466 427 aa14.31□□□□□ -0.12
SYNGR3-204ENST00000564642 ARPC1AQ92747 370 aa14.31□□□□□ -0.12
SYNGR3-204ENST00000564642 IFT46Q9NQC8 304 aa14.31□□□□□ -0.12
SYNGR3-204ENST00000564642 TPSG1Q9NRR2 321 aa14.31□□□□□ -0.12
SYNGR3-204ENST00000564642 VSIG4Q9Y279 399 aa14.31□□□□□ -0.12
SYNGR3-204ENST00000564642 PRELID3BQ9Y3B1 194 aa14.31□□□□□ -0.12
SYNGR3-204ENST00000564642 IGKV1D-13A0A0B4J2D9 117 aa14.3□□□□□ -0.12
SYNGR3-204ENST00000564642 CRYZL1O95825 349 aa14.3□□□□□ -0.12
SYNGR3-204ENST00000564642 FCER2P06734 321 aa14.3□□□□□ -0.12
SYNGR3-204ENST00000564642 IGKV1-13P0DP09 117 aa14.3□□□□□ -0.12
SYNGR3-204ENST00000564642 CD40LGP29965 261 aa14.3□□□□□ -0.12
SYNGR3-204ENST00000564642 GNB1P62873 340 aa14.3□□□□□ -0.12
SYNGR3-204ENST00000564642 VMA21Q3ZAQ7 101 aa14.3□□□□□ -0.12
SYNGR3-204ENST00000564642 ACTBL2Q562R1 376 aa14.3□□□□□ -0.12
SYNGR3-204ENST00000564642 LFNGQ8NES3 379 aa14.3□□□□□ -0.12
SYNGR3-204ENST00000564642 MYOZ3Q8TDC0 251 aa14.3□□□□□ -0.12
SYNGR3-204ENST00000564642 DPF1Q92782 380 aa14.3□□□□□ -0.12
SYNGR3-204ENST00000564642 DCUN1D5Q9BTE7 237 aa14.3□□□□□ -0.12
SYNGR3-204ENST00000564642 COMMD3Q9UBI1 195 aa14.3□□□□□ -0.12
SYNGR3-204ENST00000564642 RBMX2Q9Y388 322 aaKnown RBP14.3□□□□□ -0.12
SYNGR3-204ENST00000564642 MEIS3P1A6NDR6 274 aa14.29□□□□□ -0.12
SYNGR3-204ENST00000564642 FCGR3BO75015 233 aa14.29□□□□□ -0.12
SYNGR3-204ENST00000564642 CRYGBP07316 175 aa14.29□□□□□ -0.12
SYNGR3-204ENST00000564642 SMIM18P0DKX4 95 aa14.29□□□□□ -0.12
SYNGR3-204ENST00000564642 FCGR2CP31995 323 aa14.29□□□□□ -0.12
SYNGR3-204ENST00000564642 KIAA0141Q14154 515 aaPredicted RBP14.29□□□□□ -0.12
SYNGR3-204ENST00000564642 C19orf54Q5BKX5 351 aa14.29□□□□□ -0.12
SYNGR3-204ENST00000564642 PYHIN1Q6K0P9 492 aa14.29□□□□□ -0.12
SYNGR3-204ENST00000564642 KCTD9Q7L273 389 aa14.29□□□□□ -0.12
SYNGR3-204ENST00000564642 OR11H1Q8NG94 326 aa14.29□□□□□ -0.12
SYNGR3-204ENST00000564642 OR5M8Q8NGP6 311 aa14.29□□□□□ -0.12
SYNGR3-204ENST00000564642 GRPEL2Q8TAA5 225 aa14.29□□□□□ -0.12
SYNGR3-204ENST00000564642 OSR1Q8TAX0 266 aaPredicted RBP14.29□□□□□ -0.12
SYNGR3-204ENST00000564642 MRPS7Q9Y2R9 242 aaKnown RBP14.29□□□□□ -0.12
SYNGR3-204ENST00000564642 SMIM31A0A1B0GVY4 71 aa14.28□□□□□ -0.12
SYNGR3-204ENST00000564642 SRRM4A7MD48 611 aaKnown RBP14.28□□□□□ -0.12
SYNGR3-204ENST00000564642 ARPC1BO15143 372 aaKnown RBP14.28□□□□□ -0.12
SYNGR3-204ENST00000564642 SOX15O60248 233 aa14.28□□□□□ -0.12
SYNGR3-204ENST00000564642 RORCP51449 518 aa14.28□□□□□ -0.12
SYNGR3-204ENST00000564642 TAS2R20P59543 309 aa14.28□□□□□ -0.12
SYNGR3-204ENST00000564642 PJVKQ0ZLH3 352 aa14.28□□□□□ -0.12
SYNGR3-204ENST00000564642 ANKRD13BQ86YJ7 626 aa14.28□□□□□ -0.12
SYNGR3-204ENST00000564642 TEX45Q8NA69 505 aa14.28□□□□□ -0.12
SYNGR3-204ENST00000564642 OR5AP2Q8NGF4 316 aa14.28□□□□□ -0.12
SYNGR3-204ENST00000564642 ACOT12Q8WYK0 555 aa14.28□□□□□ -0.12
SYNGR3-204ENST00000564642 OR5B12Q96R08 314 aa14.28□□□□□ -0.12
SYNGR3-204ENST00000564642 HSD17B10Q99714 261 aaKnown RBP14.28□□□□□ -0.12
SYNGR3-204ENST00000564642 MRPS26Q9BYN8 205 aaKnown RBP14.28□□□□□ -0.12
SYNGR3-204ENST00000564642 GNB4Q9HAV0 340 aa14.28□□□□□ -0.12
SYNGR3-204ENST00000564642 AURKAIP1Q9NWT8 199 aaPredicted RBP14.28□□□□□ -0.12
SYNGR3-204ENST00000564642 NOTCH3Q9UM47 2321 aa14.27□□□□□ -0.12
SYNGR3-204ENST00000564642 IGLV2-14P01704 120 aa14.27□□□□□ -0.13
SYNGR3-204ENST00000564642 AADACP22760 399 aa14.27□□□□□ -0.13
SYNGR3-204ENST00000564642 UBE2KP61086 200 aa14.27□□□□□ -0.13
SYNGR3-204ENST00000564642 CDK10Q15131 360 aa14.27□□□□□ -0.13
SYNGR3-204ENST00000564642 OR2B11Q5JQS5 317 aa14.27□□□□□ -0.13
SYNGR3-204ENST00000564642 OR1N2Q8NGR9 330 aa14.27□□□□□ -0.13
SYNGR3-204ENST00000564642 MRAPQ8TCY5 172 aa14.27□□□□□ -0.13
SYNGR3-204ENST00000564642 CASTOR1Q8WTX7 329 aa14.27□□□□□ -0.13
SYNGR3-204ENST00000564642 SECTM1Q8WVN6 248 aa14.27□□□□□ -0.13
SYNGR3-204ENST00000564642 TCTEX1D2Q8WW35 142 aa14.27□□□□□ -0.13
SYNGR3-204ENST00000564642 CMTM3Q96MX0 182 aa14.27□□□□□ -0.13
SYNGR3-204ENST00000564642 MS4A10Q96PG2 267 aa14.27□□□□□ -0.13
SYNGR3-204ENST00000564642 ZNF355PQ9NSJ1 428 aa14.27□□□□□ -0.13
SYNGR3-204ENST00000564642 I3L521 148 aa14.26□□□□□ -0.13
SYNGR3-204ENST00000564642 PPYP01298 95 aa14.26□□□□□ -0.13
SYNGR3-204ENST00000564642 EIF4EP06730 217 aaKnown RBP14.26□□□□□ -0.13
SYNGR3-204ENST00000564642 HOXD3P31249 432 aaPredicted RBP14.26□□□□□ -0.13
SYNGR3-204ENST00000564642 PRSS3P35030 304 aa14.26□□□□□ -0.13
SYNGR3-204ENST00000564642 RPL30P62888 115 aaKnown RBP14.26□□□□□ -0.13
SYNGR3-204ENST00000564642 RUNX1Q01196 453 aa14.26□□□□□ -0.13
SYNGR3-204ENST00000564642 GPR107Q5VW38 600 aa14.26□□□□□ -0.13
SYNGR3-204ENST00000564642 MZT2AQ6P582 158 aa14.26□□□□□ -0.13
SYNGR3-204ENST00000564642 MFSD4AQ8N468 514 aa14.26□□□□□ -0.13
SYNGR3-204ENST00000564642 SNAPC3Q92966 411 aa14.26□□□□□ -0.13
SYNGR3-204ENST00000564642 PHB2Q99623 299 aa14.26□□□□□ -0.13
SYNGR3-204ENST00000564642 NAA50Q9GZZ1 169 aaKnown RBP14.26□□□□□ -0.13
SYNGR3-204ENST00000564642 SLA2Q9H6Q3 261 aa14.26□□□□□ -0.13
SYNGR3-204ENST00000564642 TAS2R8Q9NYW2 309 aa14.26□□□□□ -0.13
SYNGR3-204ENST00000564642 GABARAPO95166 117 aa14.25□□□□□ -0.13
SYNGR3-204ENST00000564642 APOA1P02647 267 aa14.25□□□□□ -0.13
SYNGR3-204ENST00000564642 OR8U8P0C7N1 319 aa14.25□□□□□ -0.13
SYNGR3-204ENST00000564642 TPPP2P59282 170 aa14.25□□□□□ -0.13
SYNGR3-204ENST00000564642 FXYD4P59646 89 aa14.25□□□□□ -0.13
SYNGR3-204ENST00000564642 ZNF616Q08AN1 781 aa14.25□□□□□ -0.13
SYNGR3-204ENST00000564642 CTF1Q16619 201 aa14.25□□□□□ -0.13
SYNGR3-204ENST00000564642 ZNF66Q6ZN08 573 aa14.25□□□□□ -0.13
SYNGR3-204ENST00000564642 IDO2Q6ZQW0 420 aa14.25□□□□□ -0.13
SYNGR3-204ENST00000564642 OVCH2Q7RTZ1 564 aa14.25□□□□□ -0.13
SYNGR3-204ENST00000564642 GPR141Q7Z602 305 aa14.25□□□□□ -0.13
SYNGR3-204ENST00000564642 OR5T1Q8NG75 326 aa14.25□□□□□ -0.13
SYNGR3-204ENST00000564642 OR4S2Q8NH73 311 aa14.25□□□□□ -0.13
SYNGR3-204ENST00000564642 GIMAP1Q8WWP7 306 aa14.25□□□□□ -0.13
SYNGR3-204ENST00000564642 TMEM68Q96MH6 324 aa14.25□□□□□ -0.13
SYNGR3-204ENST00000564642 SLC5A7Q9GZV3 580 aa14.25□□□□□ -0.13
SYNGR3-204ENST00000564642 CCL28Q9NRJ3 127 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms