RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 MFSD4AQ8N468 514 aa13.59□□□□□ -0.23
USB1-209ENST00000564387 OR52I2Q8NH67 350 aa13.59□□□□□ -0.23
USB1-209ENST00000564387 OSR1Q8TAX0 266 aaPredicted RBP13.59□□□□□ -0.23
USB1-209ENST00000564387 CCL28Q9NRJ3 127 aa13.59□□□□□ -0.23
USB1-209ENST00000564387 METTL1Q9UBP6 276 aaKnown RBP13.59□□□□□ -0.23
USB1-209ENST00000564387 KLK11Q9UBX7 282 aa13.59□□□□□ -0.23
USB1-209ENST00000564387 A3GALT2U3KPV4 340 aa13.59□□□□□ -0.23
USB1-209ENST00000564387 GABARAPH6UMI1 98 aa13.58□□□□□ -0.24
USB1-209ENST00000564387 IGHG4P01861 327 aa13.58□□□□□ -0.24
USB1-209ENST00000564387 OPN1MWP04001 364 aa13.58□□□□□ -0.24
USB1-209ENST00000564387 CSF1P09603 554 aa13.58□□□□□ -0.24
USB1-209ENST00000564387 OPN1MW2P0DN77 364 aa13.58□□□□□ -0.24
USB1-209ENST00000564387 OPN1MW3P0DN78 364 aa13.58□□□□□ -0.24
USB1-209ENST00000564387 EGR2P11161 476 aaPredicted RBP13.58□□□□□ -0.24
USB1-209ENST00000564387 HLA-DMAP28067 261 aa13.58□□□□□ -0.24
USB1-209ENST00000564387 GNRHRP30968 328 aa13.58□□□□□ -0.24
USB1-209ENST00000564387 CX3CL1P78423 397 aa13.58□□□□□ -0.24
USB1-209ENST00000564387 NDPQ00604 133 aa13.58□□□□□ -0.24
USB1-209ENST00000564387 SSBP1Q04837 148 aaKnown RBP13.58□□□□□ -0.24
USB1-209ENST00000564387 MRGPRG-AS1Q2M3A8 158 aa13.58□□□□□ -0.24
USB1-209ENST00000564387 KCTD9Q7L273 389 aa13.58□□□□□ -0.24
USB1-209ENST00000564387 SECTM1Q8WVN6 248 aa13.58□□□□□ -0.24
USB1-209ENST00000564387 SLC5A7Q9GZV3 580 aa13.58□□□□□ -0.24
USB1-209ENST00000564387 PRELID3BQ9Y3B1 194 aa13.58□□□□□ -0.24
USB1-209ENST00000564387 TSSC4Q9Y5U2 329 aaPredicted RBP13.58□□□□□ -0.24
USB1-209ENST00000564387 PLXNB1O43157 2135 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 ATP6V0E1O15342 81 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 SLC25A17O43808 307 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 TBPP20226 339 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 UBE2KP61086 200 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 SSBP2P81877 361 aaPredicted RBP13.57□□□□□ -0.24
USB1-209ENST00000564387 CBX3Q13185 183 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 FOXE3Q13461 319 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 ACTBL2Q562R1 376 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 PYHIN1Q6K0P9 492 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 TEX38Q6PEX7 206 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 ZNF818PQ6ZRF7 136 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 PPP1R27Q86WC6 154 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 TEX45Q8NA69 505 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 MINDY2Q8NBR6 621 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 OR6F1Q8NGZ6 308 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 MCFD2Q8NI22 146 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 FCAMRQ8WWV6 532 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 BORCS5Q969J3 196 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 DIRAS2Q96HU8 199 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 HARBI1Q96MB7 349 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 ZNF2Q9BSG1 426 aaPredicted RBP13.57□□□□□ -0.24
USB1-209ENST00000564387 TPSG1Q9NRR2 321 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 ZFP57Q9NU63 452 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 FBXO7Q9Y3I1 522 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 NUBP2Q9Y5Y2 271 aa13.57□□□□□ -0.24
USB1-209ENST00000564387 TCRBV4S1A1TA0A5B7 111 aa13.56□□□□□ -0.24
USB1-209ENST00000564387 SHOXO15266 292 aa13.56□□□□□ -0.24
USB1-209ENST00000564387 RBFOX2O43251 390 aaKnown RBP eCLIP13.56□□□□□ -0.24
USB1-209ENST00000564387 CRYZL1O95825 349 aa13.56□□□□□ -0.24
USB1-209ENST00000564387 IGLV1-40P01703 118 aa13.56□□□□□ -0.24
USB1-209ENST00000564387 CD74P04233 296 aa13.56□□□□□ -0.24
USB1-209ENST00000564387 ELANEP08246 267 aa13.56□□□□□ -0.24
USB1-209ENST00000564387 TNFSF8P32971 234 aa13.56□□□□□ -0.24
USB1-209ENST00000564387 HERV-K104P61576 105 aa13.56□□□□□ -0.24
USB1-209ENST00000564387 MYOZ3Q8TDC0 251 aa13.56□□□□□ -0.24
USB1-209ENST00000564387 SMIM4Q8WVI0 70 aa13.56□□□□□ -0.24
USB1-209ENST00000564387 C6orf62Q9GZU0 229 aaPredicted RBP13.56□□□□□ -0.24
USB1-209ENST00000564387 TAS2R8Q9NYW2 309 aa13.56□□□□□ -0.24
USB1-209ENST00000564387 CCDC160A6NGH7 325 aa13.55□□□□□ -0.24
USB1-209ENST00000564387 FCGR3BO75015 233 aa13.55□□□□□ -0.24
USB1-209ENST00000564387 PSMB8P28062 276 aa13.55□□□□□ -0.24
USB1-209ENST00000564387 UCP3P55916 312 aa13.55□□□□□ -0.24
USB1-209ENST00000564387 FXYD4P59646 89 aa13.55□□□□□ -0.24
USB1-209ENST00000564387 DGCR2P98153 550 aa13.55□□□□□ -0.24
USB1-209ENST00000564387 PLGLAQ15195 96 aa13.55□□□□□ -0.24
USB1-209ENST00000564387 NSUN5P1Q3KNT7 163 aa13.55□□□□□ -0.24
USB1-209ENST00000564387 LHFPL1Q86WI0 220 aa13.55□□□□□ -0.24
USB1-209ENST00000564387 TMEM229BQ8NBD8 167 aa13.55□□□□□ -0.24
USB1-209ENST00000564387 GPHA2Q96T91 129 aa13.55□□□□□ -0.24
USB1-209ENST00000564387 FXYD6Q9H0Q3 95 aa13.55□□□□□ -0.24
USB1-209ENST00000564387 CMYA5Q8N3K9 4069 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 TRAV41A0A0B4J266 112 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 G3V318 75 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 ARPC1BO15143 372 aaKnown RBP13.54□□□□□ -0.24
USB1-209ENST00000564387 GSTZ1O43708 216 aaPredicted RBP13.54□□□□□ -0.24
USB1-209ENST00000564387 CA2P00918 260 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 CD3DP04234 171 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 VDAC1P21796 283 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 SLC6A1P30531 599 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 KIR2DS2P43631 304 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 RPL23AP62750 156 aaKnown RBP13.54□□□□□ -0.24
USB1-209ENST00000564387 PJVKQ0ZLH3 352 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 VMA21Q3ZAQ7 101 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 AKIRIN2Q53H80 203 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 AADACL3Q5VUY0 350 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 TMEM17Q86X19 198 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 ARRDC1Q8N5I2 433 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 OR4F17Q8NGA8 305 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 OR4S2Q8NH73 311 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 TCTEX1D2Q8WW35 142 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 DGCR14Q96DF8 476 aaKnown RBP13.54□□□□□ -0.24
USB1-209ENST00000564387 OR4F4Q96R69 305 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 PARP11Q9NR21 331 aa13.54□□□□□ -0.24
USB1-209ENST00000564387 NDUFA13Q9P0J0 144 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms