RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 J3KRW8 73 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 ORC5O43913 435 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 SSX5O60225 188 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 CA11O75493 328 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 CLPXO76031 633 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 IGHV1-69P01742 117 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 MELTFP08582 738 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 RCC1P18754 421 aaPredicted RBP3.6□□□□□ -1.83
SMG1-206ENST00000562668 OMGP23515 440 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 BLVRBP30043 206 aaPredicted RBP3.6□□□□□ -1.83
SMG1-206ENST00000562668 SSTR5P35346 364 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 SERPINB10P48595 397 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 UBE2E1P51965 193 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 DYNC1I2Q13409 638 aaKnown RBP3.6□□□□□ -1.83
SMG1-206ENST00000562668 HMGN3Q15651 99 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 CHRFAM7AQ494W8 412 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 KIAA2026Q5HYC2 2103 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 ATAD3CQ5T2N8 411 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 IDNKQ5T6J7 187 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 PRAMEF5Q5TYX0 476 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 METTL11BQ5VVY1 283 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 BRD3OSQ6XYD6 125 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 GLDNQ6ZMI3 551 aaPredicted RBP3.6□□□□□ -1.83
SMG1-206ENST00000562668 ZDHHC22Q8N966 263 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 ZNF439Q8NDP4 499 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 OR56B1Q8NGI3 324 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 OR4P4Q8NGL7 312 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 OR10R2Q8NGX6 335 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 NANPQ8TBE9 248 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 PIFOQ8TCI5 191 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 MRGPRDQ8TDS7 321 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 RAB2BQ8WUD1 216 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 LHX4Q969G2 390 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 ISOC1Q96CN7 298 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 SLC6A7Q99884 636 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 HDHD3Q9BSH5 251 aaPredicted RBP3.6□□□□□ -1.83
SMG1-206ENST00000562668 URM1Q9BTM9 101 aaKnown RBP3.6□□□□□ -1.83
SMG1-206ENST00000562668 BEX2Q9BXY8 128 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 SLIRPQ9GZT3 109 aaKnown RBP3.6□□□□□ -1.83
SMG1-206ENST00000562668 NXF2Q9GZY0 626 aaKnown RBP3.6□□□□□ -1.83
SMG1-206ENST00000562668 DCSTAMPQ9H295 470 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 TMEM133Q9H2Q1 129 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 MIXL1Q9H2W2 232 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 ZNF286AQ9HBT8 521 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 ESM1Q9NQ30 184 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 RHBDL2Q9NX52 303 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 CALYQ9NYX4 217 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 ONECUT1Q9UBC0 465 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 SPATA2Q9UM82 520 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 ETV7Q9Y603 341 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 SESN1Q9Y6P5 492 aa3.6□□□□□ -1.83
SMG1-206ENST00000562668 CMYA5Q8N3K9 4069 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 NAV3Q8IVL0 2385 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 TRGV10A0A0A0MS01 117 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 A0A0A6YYH2 397 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 IGHV2-26A0A0B4J1V2 119 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 A0A0U1RQK1 487 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 FUOMA2VDF0 154 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 A6NJ64 397 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 MCRIP1C9JLW8 97 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 ZNF701M0R085 212 aaPredicted RBP3.59□□□□□ -1.83
SMG1-206ENST00000562668 NPFFO15130 113 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 VENTXO95231 258 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 HLA-DQB1P01920 261 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 EIF4EP06730 217 aaKnown RBP3.59□□□□□ -1.83
SMG1-206ENST00000562668 FCGR3AP08637 254 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 HIST1H1DP16402 221 aaKnown RBP3.59□□□□□ -1.83
SMG1-206ENST00000562668 ELK1P19419 428 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 GZMHP20718 246 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 CDK2P24941 298 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 PAX6P26367 422 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 SAA4P35542 130 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 BPIFB3P59826 476 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 CD81P60033 236 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 HERPUD1Q15011 391 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 DEFB112Q30KQ8 113 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 LY6G6FQ5SQ64 297 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 NCR3LG1Q68D85 454 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 Q6ZS49 121 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 LHFPL4Q7Z7J7 247 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 ZNF554Q86TJ5 538 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 CROCCP3Q8IVE0 287 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 PDZD9Q8IXQ8 264 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 LINC00311Q8N616 119 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 SIGLECL1Q8N7X8 197 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 C8orf31Q8N9H6 132 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 OR10A7Q8NGE5 316 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 OR52M1Q8NGK5 317 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 OR4K15Q8NH41 348 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 OR1L1Q8NH94 360 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 RFESDQ8TAC1 157 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 UBALD1Q8TB05 177 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 CCDC107Q8WV48 283 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 C22orf15Q8WYQ4 148 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 ST6GALNAC6Q969X2 333 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 RAB3CQ96E17 227 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 CMTM3Q96MX0 182 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 NEDD4LQ96PU5 975 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 SOSTQ9BQB4 213 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 TOLLIPQ9H0E2 274 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms