RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 UBBP0CG47 229 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 FOLR2P14207 255 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 BMI1P35226 326 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 CEACAM6P40199 344 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 RPS11P62280 158 aaKnown RBP eCLIP4.81□□□□□ -1.64
USP8-213ENST00000560885 DEFA5Q01523 94 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 ANKRD55Q3KP44 614 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 OR2G6Q5TZ20 316 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 C1orf146Q5VVC0 180 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 C6orf201Q7Z4U5 140 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 FAM223AQ8IWN6 122 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 NKAIN3Q8N8D7 197 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 ZNF383Q8NA42 475 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.81□□□□□ -1.64
USP8-213ENST00000560885 ADAD2Q8NCV1 583 aaKnown RBP4.81□□□□□ -1.64
USP8-213ENST00000560885 GATAD1Q8WUU5 269 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 THRSPQ92748 146 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 CYYR1Q96J86 154 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 PHB2Q99623 299 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 SLC29A1Q99808 456 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 GGTLC1Q9BX51 225 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 PARP12Q9H0J9 701 aaKnown RBP4.81□□□□□ -1.64
USP8-213ENST00000560885 RIMS4Q9H426 269 aaPredicted RBP4.81□□□□□ -1.64
USP8-213ENST00000560885 CHMP1AQ9HD42 196 aaPredicted RBP4.81□□□□□ -1.64
USP8-213ENST00000560885 MGAT4AQ9UM21 535 aa4.81□□□□□ -1.64
USP8-213ENST00000560885 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.8□□□□□ -1.64
USP8-213ENST00000560885 TRBV6-6A0A0A6YYG2 114 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 TRBV9A0A0B4J1U6 114 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 A0A1W2PPK0 400 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 C2orf70A6NJV1 201 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 RBMXL2O75526 392 aaKnown RBP4.8□□□□□ -1.64
USP8-213ENST00000560885 LALBAP00709 142 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 OR9G9P0C7N8 305 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 CBLN1P23435 193 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 MAP2K4P45985 399 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 RASSF2P50749 326 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 LINC00205P59089 165 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 RPS27AP62979 156 aaKnown RBP4.8□□□□□ -1.64
USP8-213ENST00000560885 RHOGP84095 191 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 EWSR1Q01844 656 aaKnown RBP eCLIP4.8□□□□□ -1.64
USP8-213ENST00000560885 ATP5G2Q06055 141 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 CBX3Q13185 183 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 EXOSC2Q13868 293 aaKnown RBP4.8□□□□□ -1.64
USP8-213ENST00000560885 Q6ZWC4 215 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 LYG2Q86SG7 212 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 NECAP1Q8NC96 275 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 OR52B4Q8NGK2 314 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 KCNG3Q8TAE7 436 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 SETD6Q8TBK2 473 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 PGLYRP3Q96LB9 341 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 AKIP1Q9NQ31 210 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 SLC35D1Q9NTN3 355 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 OR1A1Q9P1Q5 309 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 ZNF230Q9UIE0 474 aaPredicted RBP4.8□□□□□ -1.64
USP8-213ENST00000560885 EXOSC1Q9Y3B2 195 aaKnown RBP4.8□□□□□ -1.64
USP8-213ENST00000560885 DMRT1Q9Y5R6 373 aa4.8□□□□□ -1.64
USP8-213ENST00000560885 LOC100130705A0A1B0GUX0 176 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 IRGMA1A4Y4 181 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 M0R1X1 148 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 UBE2CO00762 179 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 DYNC1I1O14576 645 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 SHOXO15266 292 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 MPPED1O15442 326 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 SPRY2O43597 315 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 GGCTO75223 188 aaKnown RBP4.79□□□□□ -1.64
USP8-213ENST00000560885 DEDDO75618 318 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 APELAP0DMC3 54 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 RRASP10301 218 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 MYL12AP19105 171 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 MAPK3P27361 379 aaPredicted RBP4.79□□□□□ -1.64
USP8-213ENST00000560885 HTR2CP28335 458 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 APOC4P55056 127 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 TAS2R43P59537 309 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 HLA-DRB3P79483 266 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 MED21Q13503 144 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 SMN1Q16637 294 aaKnown RBP4.79□□□□□ -1.64
USP8-213ENST00000560885 MRGPRG-AS1Q2M3A8 158 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 TMEM177Q53S58 311 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 GLT8D1Q68CQ7 371 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 ZNF57Q68EA5 555 aaPredicted RBP4.79□□□□□ -1.64
USP8-213ENST00000560885 GPHB5Q86YW7 130 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 TMEM61Q8N0U2 210 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 CBR4Q8N4T8 237 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 TMEM217Q8N7C4 229 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 TEX45Q8NA69 505 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 ZNF485Q8NCK3 441 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 APH1BQ8WW43 257 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 SRSF12Q8WXF0 261 aaKnown RBP4.79□□□□□ -1.64
USP8-213ENST00000560885 HARBI1Q96MB7 349 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 DERL3Q96Q80 235 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 TM2D1Q9BX74 207 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 TMEM59Q9BXS4 323 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 PLEKHJ1Q9NW61 149 aa4.79□□□□□ -1.64
USP8-213ENST00000560885 DIMT1Q9UNQ2 313 aaKnown RBP4.79□□□□□ -1.64
USP8-213ENST00000560885 PKHD1P08F94 4074 aa4.78□□□□□ -1.64
USP8-213ENST00000560885 SRRM4A7MD48 611 aaKnown RBP4.78□□□□□ -1.64
USP8-213ENST00000560885 A8MWP6 167 aa4.78□□□□□ -1.64
USP8-213ENST00000560885 PPP5D1E7EU14 171 aa4.78□□□□□ -1.64
USP8-213ENST00000560885 CREBL2O60519 120 aaPredicted RBP4.78□□□□□ -1.64
USP8-213ENST00000560885 WBP4O75554 376 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms