RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 TRAV25A0A0B4J276 109 aa6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 A8MWP6 167 aa6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 S1PR2O95136 353 aa6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 NAPSAO96009 420 aa6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 C8orf88P0DMB2 117 aa6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 RPL35AP18077 110 aaKnown RBP6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 MFAP2P55001 183 aa6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 TNXAQ16473 311 aa6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 TMEM177Q53S58 311 aa6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 RPL22L1Q6P5R6 122 aaKnown RBP6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 RBPMS2Q6ZRY4 209 aaKnown RBP6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 C6orf201Q7Z4U5 140 aa6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 TTC9CQ8N5M4 171 aa6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 NECAP1Q8NC96 275 aa6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 EDARADDQ8WWZ3 215 aa6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 HARBI1Q96MB7 349 aa6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 MFFQ9GZY8 342 aa6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 MAP6D1Q9H9H5 199 aa6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 AMBNQ9NP70 447 aa6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 IMPAD1Q9NX62 359 aa6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 EXOSC1Q9Y3B2 195 aaKnown RBP6.57□□□□□ -1.36
RABGGTA-217ENST00000560521 TRBV5-5A0A0J9YX44 114 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 A0A1W2PPK0 400 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 ZNF320A2RRD8 509 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 M0R1X1 148 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 SHOXO15266 292 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 MPPED1O15442 326 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 IGHV3-23P01764 117 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 LIMS3P0CW19 117 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 LIMS4P0CW20 117 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 GABRB1P18505 474 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 ZBTB25P24278 435 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 ARL3P36405 182 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 RPS11P62280 158 aaKnown RBP eCLIP6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 PRSS8Q16651 343 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 ODF3L2Q3SX64 289 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 FAM106AQ4KMX7 169 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 CCDC58Q4VC31 144 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 FAM209BQ5JX69 171 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 CLEC19AQ6UXS0 136 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 SLC38A6Q8IZM9 456 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 OR52I1Q8NGK6 324 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 SETD6Q8TBK2 473 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 CCDC140Q96MF4 163 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 RARRES2Q99969 163 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 C11orf68Q9H3H3 251 aaKnown RBP6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 ZNF221Q9UK13 617 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 S4R3C0 116 aa6.56□□□□□ -1.36
RABGGTA-217ENST00000560521 SNTNA6NMZ2 147 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 ANKRD65E5RJM6 399 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 CASQ2O14958 399 aaPredicted RBP6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 DEFB4AO15263 64 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 OGG1O15527 345 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 SCTP09683 121 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 MAP2K4P45985 399 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 ZNF585BQ52M93 769 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 UNQ9165/PRO28630Q6UXU0 137 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 IDO2Q6ZQW0 420 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 C19orf35Q6ZS72 473 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 CDH26Q8IXH8 852 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 PACRGLQ8N7B6 248 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 TEX45Q8NA69 505 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 GALNT14Q96FL9 552 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 C5orf30Q96GV9 206 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 NEDD4LQ96PU5 975 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 S100A14Q9HCY8 104 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 MRPL27Q9P0M9 148 aaKnown RBP6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 OAZ3Q9UMX2 235 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 LRP1BQ9NZR2 4599 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 HERC1Q15751 4861 aa6.55□□□□□ -1.36
RABGGTA-217ENST00000560521 TRBV5-7A0A0A0MS05 114 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 TRBV6-6A0A0A6YYG2 114 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 IGKV1-6A0A0C4DH72 117 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 M0R2N4 97 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 LALBAP00709 142 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 HTR2CP28335 458 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 UBE2KP61086 200 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 HLA-DRB3P79483 266 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 RCN1Q15293 331 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 Q499Y3 187 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 OR2G6Q5TZ20 316 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 OR4A47Q6IF82 309 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 OR10K2Q6IF99 312 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 ZNF645Q8N7E2 425 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 OR11H2Q8NH07 326 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 OR5B3Q8NH48 314 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 ACOT12Q8WYK0 555 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 FANCD2OSQ96PS1 177 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 SPAG8Q99932 426 aaPredicted RBP6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 NICN1Q9BSH3 213 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 HDHD3Q9BSH5 251 aaPredicted RBP6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 CSTL1Q9H114 145 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 C5orf66Q9H5L9 145 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 ZNF430Q9H8G1 570 aaPredicted RBP6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 CHMP1AQ9HD42 196 aaPredicted RBP6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 MRPS18AQ9NVS2 196 aaKnown RBP6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 SDHAF2Q9NX18 166 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 CKLFQ9UBR5 152 aa6.54□□□□□ -1.36
RABGGTA-217ENST00000560521 AP4S1Q9Y587 144 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms