RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, human

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB4-204	ENST00000559849	LIN54	Q6MZP7	749 aa		10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	IDO2	Q6ZQW0	420 aa		10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	CCDC28A	Q8IWP9	274 aa		10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	FLYWCH2	Q96CP2	140 aa	Known RBP	10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	ADTRP	Q96IZ2	230 aa		10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	NOL4L	Q96MY1	436 aa	Predicted RBP	10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	SRR	Q9GZT4	340 aa		10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	SCPEP1	Q9HB40	452 aa		10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	ANAPC10	Q9UM13	185 aa		10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	PSMB11	A5LHX3	300 aa		10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	LINC01548	A6NM66	108 aa		10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	IGKV1-16	P04430	117 aa		10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	DUT	P33316	252 aa	Known RBP	10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	NKX2-5	P52952	324 aa	Predicted RBP	10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	RPS16	P62249	146 aa	Known RBP	10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	CDK10	Q15131	360 aa		10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	GPX8	Q8TED1	209 aa		10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	GON7	Q9BXV9	100 aa		10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	SLC35D1	Q9NTN3	355 aa		10.8	□□□□□ -0.68
CHRNB4-204	ENST00000559849	SULT1C2	O00338	296 aa		10.79	□□□□□ -0.68
CHRNB4-204	ENST00000559849	RRH	O14718	337 aa		10.79	□□□□□ -0.68
CHRNB4-204	ENST00000559849	HLA-DRB1	P01911	266 aa		10.79	□□□□□ -0.68
CHRNB4-204	ENST00000559849	TRAPPC2	P0DI81	140 aa		10.79	□□□□□ -0.68
CHRNB4-204	ENST00000559849	TRAPPC2B	P0DI82	140 aa		10.79	□□□□□ -0.68
CHRNB4-204	ENST00000559849	CD83	Q01151	205 aa		10.79	□□□□□ -0.68
CHRNB4-204	ENST00000559849	OVCH2	Q7RTZ1	564 aa		10.79	□□□□□ -0.68
CHRNB4-204	ENST00000559849	STPG2	Q8N412	459 aa		10.79	□□□□□ -0.68
CHRNB4-204	ENST00000559849	OR4X2	Q8NGF9	303 aa		10.79	□□□□□ -0.68
CHRNB4-204	ENST00000559849	C15orf40	Q8WUR7	153 aa		10.79	□□□□□ -0.68
CHRNB4-204	ENST00000559849	C5orf30	Q96GV9	206 aa		10.79	□□□□□ -0.68
CHRNB4-204	ENST00000559849	TSNAX	Q99598	290 aa	Known RBP	10.79	□□□□□ -0.68
CHRNB4-204	ENST00000559849	CITED2	Q99967	270 aa	Predicted RBP	10.79	□□□□□ -0.68
CHRNB4-204	ENST00000559849	SOST	Q9BQB4	213 aa		10.79	□□□□□ -0.68
CHRNB4-204	ENST00000559849	HSPB9	Q9BQS6	159 aa		10.79	□□□□□ -0.68
CHRNB4-204	ENST00000559849	EXTL2	Q9UBQ6	330 aa		10.79	□□□□□ -0.68
CHRNB4-204	ENST00000559849	ZNF107	Q9UII5	783 aa	Predicted RBP	10.79	□□□□□ -0.68
CHRNB4-204	ENST00000559849	LINC00527	Q9UJ94	153 aa		10.79	□□□□□ -0.68
CHRNB4-204	ENST00000559849	IGKV1D-13	A0A0B4J2D9	117 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	CSF1	P09603	554 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	IGKV1-13	P0DP09	117 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	RRAS	P10301	218 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	LGALS7	P47929	136 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	TAS2R46	P59540	309 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	SLC35B1	P78383	322 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	RTL8B	Q17RB0	113 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	HIST2H2BD	Q6DRA6	164 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	NDUFA11	Q86Y39	141 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	PPY	P01298	95 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	IGLV2-14	P01704	120 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	AADAC	P22760	399 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	PTBP1	P26599	531 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	RFX2	P48378	723 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	IL18	Q14116	193 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	PLGLA	Q15195	96 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	PYDC2	Q56P42	97 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	DHRS11	Q6UWP2	260 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	TREML4	Q6UXN2	200 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	ZNF329	Q86UD4	541 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	GDPD1	Q8N9F7	314 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	FBXL15	Q9H469	300 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	SLA2	Q9H6Q3	261 aa		10.78	□□□□□ -0.68
CHRNB4-204	ENST00000559849	LINC00473	A8K010	186 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	SPDEF	O95238	335 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	OPN1MW	P04001	364 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	IGF1	P05019	195 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	OPN1MW2	P0DN77	364 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	OPN1MW3	P0DN78	364 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	DEFA1	P59665	94 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	DEFA3	P59666	94 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	DYRK1A	Q13627	763 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	PSG5	Q15238	335 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	BAK1	Q16611	211 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	TCTEX1D4	Q5JR98	221 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	C10orf99	Q6UWK7	81 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	BVES	Q8NE79	360 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	OR5H2	Q8NGV7	314 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	DDB2	Q92466	427 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	EHF	Q9NZC4	300 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	PRELID3B	Q9Y3B1	194 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	IGHV7-81	A0A0B4J1V7	117 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	HLA-DMA	P28067	261 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	MSMO1	Q15800	293 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	NSUN5P1	Q3KNT7	163 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	TMEM177	Q53S58	311 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	COMMD1	Q8N668	190 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	SECTM1	Q8WVN6	248 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	HSD17B10	Q99714	261 aa	Known RBP	10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	OR51J1	Q9H342	316 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	METTL1	Q9UBP6	276 aa	Known RBP	10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	ZNF580	Q9UK33	172 aa		10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.77	□□□□□ -0.69
CHRNB4-204	ENST00000559849	TCRBV4S1A1T	A0A5B7	111 aa		10.76	□□□□□ -0.69
CHRNB4-204	ENST00000559849	CCNK	O75909	580 aa		10.76	□□□□□ -0.69
CHRNB4-204	ENST00000559849	PMP2	P02689	132 aa		10.76	□□□□□ -0.69
CHRNB4-204	ENST00000559849	IL7	P13232	177 aa		10.76	□□□□□ -0.69
CHRNB4-204	ENST00000559849	TEX38	Q6PEX7	206 aa		10.76	□□□□□ -0.69
CHRNB4-204	ENST00000559849	KCTD9	Q7L273	389 aa		10.76	□□□□□ -0.69
CHRNB4-204	ENST00000559849	POC5	Q8NA72	575 aa		10.76	□□□□□ -0.69
CHRNB4-204	ENST00000559849	ZBTB34	Q8NCN2	500 aa		10.76	□□□□□ -0.69
CHRNB4-204	ENST00000559849	OR6F1	Q8NGZ6	308 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms