RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 KLK15Q9H2R5 256 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 GHITMQ9H3K2 345 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 GPN1Q9HCN4 374 aaPredicted RBP4.51□□□□□ -1.69
USP3-215ENST00000559771 RANGRFQ9HD47 186 aaPredicted RBP4.51□□□□□ -1.69
USP3-215ENST00000559771 LIN7CQ9NUP9 197 aaKnown RBP4.51□□□□□ -1.69
USP3-215ENST00000559771 TAS2R4Q9NYW5 299 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 PRR13Q9NZ81 148 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 AMMECR1Q9Y4X0 333 aaPredicted RBP4.51□□□□□ -1.69
USP3-215ENST00000559771 HYDINQ4G0P3 5121 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 IGHV3-43A0A0B4J1X8 118 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 ANKRD20A5PA0PJZ0 165 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 AP4M1O00189 453 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 GEMIN2O14893 280 aaKnown RBP4.5□□□□□ -1.69
USP3-215ENST00000559771 LANCL1O43813 399 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 RAMP3O60896 148 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 RBBP9O75884 186 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 MT-ND4P03905 459 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 GAPDHP04406 335 aaKnown RBP4.5□□□□□ -1.69
USP3-215ENST00000559771 IGF1P05019 195 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 IGHV3-43DP0DP04 118 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 IGFBP3P17936 291 aaPredicted RBP4.5□□□□□ -1.69
USP3-215ENST00000559771 PSMB8P28062 276 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 CD1BP29016 333 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 PPIFP30405 207 aaKnown RBP4.5□□□□□ -1.69
USP3-215ENST00000559771 BTCP35070 178 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 SOX2P48431 317 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 KCNJ3P48549 501 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 ZNF137PP52743 207 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 RBM11P57052 281 aaKnown RBP4.5□□□□□ -1.69
USP3-215ENST00000559771 ACTBP60709 375 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 SLC35B1P78383 322 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 IFITM2Q01629 132 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 FOXE3Q13461 319 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 RAB11BQ15907 218 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 C21orf62-AS1Q17RA5 79 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 CT45A1Q5HYN5 189 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 ZNF497Q6ZNH5 498 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 MOB3BQ86TA1 216 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 LYPD6Q86Y78 171 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 FOXRED2Q8IWF2 684 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 GAPTQ8N292 157 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 OR52M1Q8NGK5 317 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 OR6M1Q8NGM8 313 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 OR13C5Q8NGS8 318 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 OR10X1Q8NGY0 326 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 OR8U1Q8NH10 309 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 CT45A3Q8NHU0 189 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 CCDC107Q8WV48 283 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 DPF1Q92782 380 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 SLC25A38Q96DW6 304 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 S1PR3Q99500 378 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 GFI1Q99684 422 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 UQCC2Q9BRT2 126 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 ALX4Q9H161 411 aaPredicted RBP4.5□□□□□ -1.69
USP3-215ENST00000559771 OR51J1Q9H342 316 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 GNB4Q9HAV0 340 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 HRASLSQ9HDD0 168 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 NUDT15Q9NV35 164 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 GAR1Q9NY12 217 aaKnown RBP4.5□□□□□ -1.69
USP3-215ENST00000559771 IL36GQ9NZH8 169 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 MTFP1Q9UDX5 166 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 ZNF580Q9UK33 172 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 DHDHQ9UQ10 334 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 ST3GAL6Q9Y274 331 aa4.5□□□□□ -1.69
USP3-215ENST00000559771 MRPS7Q9Y2R9 242 aaKnown RBP4.5□□□□□ -1.69
USP3-215ENST00000559771 A0A1W2PPK0 400 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 TMEM30CPA0ZSE6 113 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 METTL21EPA6NDL7 271 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 FAM90A10PA6NDY2 464 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 NCBP2LA6PVI3 153 aaKnown RBP4.49□□□□□ -1.69
USP3-215ENST00000559771 SEC14L6B5MCN3 397 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 C12orf77C9JDV5 145 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 G3V318 75 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 I3L521 148 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 SDCBPO00560 298 aaPredicted RBP4.49□□□□□ -1.69
USP3-215ENST00000559771 OR7C1O76099 320 aaPredicted RBP4.49□□□□□ -1.69
USP3-215ENST00000559771 RGS11O94810 467 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 NDUFB6O95139 128 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 MOSP00540 346 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 ELANEP08246 267 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 CD3GP09693 182 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 GSTT2P0CG29 244 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 SULT1A3P0DMM9 295 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 SULT1A4P0DMN0 295 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 TBPP20226 339 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 RAB3AP20336 220 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 GZMHP20718 246 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 CNTFRP26992 372 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 CHATP28329 748 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 PRSS3P35030 304 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 RCVRNP35243 200 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 ECI1P42126 302 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 TAS2R20P59543 309 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 GNB1P62873 340 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 RSU1Q15404 277 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 RBMS2Q15434 407 aaKnown RBP4.49□□□□□ -1.69
USP3-215ENST00000559771 C19orf54Q5BKX5 351 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 C1orf100Q5SVJ3 147 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 CASC10Q5T4H9 136 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 C9orf66Q5T8R8 295 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms