RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 B3GALNT1O75752 331 aa11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 MOSP00540 346 aa11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 TCRBP04435 133 aa11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 AMY1AP04745 511 aa11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 RLN1P04808 185 aa11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 CRYGBP07316 175 aa11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 FAM106CPP0CH98 169 aa11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 KIR2DS2P43631 304 aa11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 RPL15P61313 204 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 UBA52P62987 128 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 DCTN2Q13561 401 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 PHLDA2Q53GA4 152 aa11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 TBC1D26Q86UD7 250 aa11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 SLC25A42Q86VD7 318 aa11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 FAM71E2Q8N5Q1 922 aa11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 ADAD2Q8NCV1 583 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 OR8H1Q8NGG4 311 aa11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 ZDHHC16Q969W1 377 aa11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 SLC35D1Q9NTN3 355 aa11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 COPZ2Q9P299 210 aa11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 PITPNC1Q9UKF7 332 aa11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 SRRM4A7MD48 611 aaKnown RBP11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 RNF212BA8MTL3 300 aa11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 H0Y980 276 aa11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 FGF16O43320 207 aa11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 RAMP3O60896 148 aa11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 APOA2P02652 100 aa11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 PGAM2P15259 253 aa11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 UCP1P25874 307 aa11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 UBE2MP61081 183 aaKnown RBP11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 CATR1Q13166 79 aa11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 MRGPRG-AS1Q2M3A8 158 aa11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 MZT2BQ6NZ67 158 aa11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 NRARPQ7Z6K4 114 aa11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 OR4C13Q8NGP0 309 aa11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 OSR1Q8TAX0 266 aaPredicted RBP11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 CD300LFQ8TDQ1 290 aa11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 GLYATL2Q8WU03 294 aa11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 CAPSLQ8WWF8 208 aa11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 JMJD8Q96S16 334 aa11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 NAA60Q9H7X0 242 aa11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 LIN7CQ9NUP9 197 aaKnown RBP11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 PRELID3BQ9Y3B1 194 aa11.8□□□□□ -0.52
SNRPA1-207ENST00000559309 TCF21O43680 179 aa11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 SPDEFO95238 335 aa11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 IGKV1-39P01597 117 aa11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 IGKV1D-39P04432 117 aa11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 LGALS7P47929 136 aa11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 F2RL1P55085 397 aa11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 TMEM128Q5BJH2 165 aa11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 C16orf87Q6PH81 154 aa11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 C11orf88Q6PI97 169 aa11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 RBMS3Q6XE24 437 aaKnown RBP11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 SPAG16Q8N0X2 631 aa11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 Q8N9W7 124 aa11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 CCDC71LQ8N9Z2 235 aa11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 ZFAND2BQ8WV99 257 aa11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 TCTEX1D2Q8WW35 142 aa11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 TP53RKQ96S44 253 aa11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 PLEKHA2Q9HB19 425 aa11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 FLVCR2Q9UPI3 526 aa11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 C14orf166Q9Y224 244 aaKnown RBP11.79□□□□□ -0.52
SNRPA1-207ENST00000559309 ANK2Q01484 3957 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 C3orf85A0A1B0GTC6 90 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 FAM240BA0A1B0GVZ2 78 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 GPR137BO60478 399 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 FCGR3BO75015 233 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 CDS2O95674 445 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 PTTG1O95997 202 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 HPRT1P00492 218 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 P0C879 139 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 TMEM11P17152 192 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 CNTFRP26992 372 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 RAG2P55895 527 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 DEFA1P59665 94 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 DEFA3P59666 94 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 RTL8BQ17RB0 113 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 ABCA11PQ4W5N1 156 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 PUSL1Q8N0Z8 303 aaKnown RBP11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 CENPSQ8N2Z9 138 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 C5orf56Q8N8D9 126 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 POC5Q8NA72 575 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 OR51H1Q8NH63 302 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 OR4S2Q8NH73 311 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 FLYWCH2Q96CP2 140 aaKnown RBP11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 TMEM56Q96MV1 263 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 MARVELD1Q9BSK0 173 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 SLC25A33Q9BSK2 321 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 TMEM222Q9H0R3 208 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 C20orf85Q9H1P6 137 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 COMMD9Q9P000 198 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 NUBP2Q9Y5Y2 271 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 TMEM56-RWDD3S4R434 201 aa11.78□□□□□ -0.52
SNRPA1-207ENST00000559309 TEX13DA0A0J9YY54 714 aaPredicted RBP11.77□□□□□ -0.53
SNRPA1-207ENST00000559309 FGF2P09038 288 aa11.77□□□□□ -0.53
SNRPA1-207ENST00000559309 RPA2P15927 270 aa11.77□□□□□ -0.53
SNRPA1-207ENST00000559309 S100GP29377 79 aa11.77□□□□□ -0.53
SNRPA1-207ENST00000559309 TAS2R31P59538 309 aa11.77□□□□□ -0.53
SNRPA1-207ENST00000559309 UBE2KP61086 200 aa11.77□□□□□ -0.53
SNRPA1-207ENST00000559309 SSBP2P81877 361 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms