RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 WSB1Q9Y6I7 421 aa14.69□□□□□ -0.06
CASC4-209ENST00000559222 SULT1C2O00338 296 aa14.68□□□□□ -0.06
CASC4-209ENST00000559222 KCNAB3O43448 404 aa14.68□□□□□ -0.06
CASC4-209ENST00000559222 FCGR3BO75015 233 aa14.68□□□□□ -0.06
CASC4-209ENST00000559222 CA2P00918 260 aa14.68□□□□□ -0.06
CASC4-209ENST00000559222 CRYGBP07316 175 aa14.68□□□□□ -0.06
CASC4-209ENST00000559222 CSF1P09603 554 aa14.68□□□□□ -0.06
CASC4-209ENST00000559222 TAS2R46P59540 309 aa14.68□□□□□ -0.06
CASC4-209ENST00000559222 CX3CL1P78423 397 aa14.68□□□□□ -0.06
CASC4-209ENST00000559222 PLGLAQ15195 96 aa14.68□□□□□ -0.06
CASC4-209ENST00000559222 C2orf68Q2NKX9 166 aa14.68□□□□□ -0.06
CASC4-209ENST00000559222 FOXB2Q5VYV0 432 aa14.68□□□□□ -0.06
CASC4-209ENST00000559222 TCTEX1D2Q8WW35 142 aa14.68□□□□□ -0.06
CASC4-209ENST00000559222 MOB3AQ96BX8 217 aa14.68□□□□□ -0.06
CASC4-209ENST00000559222 DIRAS2Q96HU8 199 aa14.68□□□□□ -0.06
CASC4-209ENST00000559222 ADTRPQ96IZ2 230 aa14.68□□□□□ -0.06
CASC4-209ENST00000559222 FAM103A1Q9BTL3 118 aaKnown RBP14.68□□□□□ -0.06
CASC4-209ENST00000559222 TCRBV4S1A1TA0A5B7 111 aa14.67□□□□□ -0.06
CASC4-209ENST00000559222 ARPC1BO15143 372 aaKnown RBP14.67□□□□□ -0.06
CASC4-209ENST00000559222 SHOXO15266 292 aa14.67□□□□□ -0.06
CASC4-209ENST00000559222 EGR2P11161 476 aaPredicted RBP14.67□□□□□ -0.06
CASC4-209ENST00000559222 TNFSF8P32971 234 aa14.67□□□□□ -0.06
CASC4-209ENST00000559222 HERV-K104P61576 105 aa14.67□□□□□ -0.06
CASC4-209ENST00000559222 RTL8BQ17RB0 113 aa14.67□□□□□ -0.06
CASC4-209ENST00000559222 KHDC1LQ5JSQ8 128 aa14.67□□□□□ -0.06
CASC4-209ENST00000559222 DHRS11Q6UWP2 260 aa14.67□□□□□ -0.06
CASC4-209ENST00000559222 IDO2Q6ZQW0 420 aa14.67□□□□□ -0.06
CASC4-209ENST00000559222 NDUFA11Q86Y39 141 aa14.67□□□□□ -0.06
CASC4-209ENST00000559222 MFSD4AQ8N468 514 aa14.67□□□□□ -0.06
CASC4-209ENST00000559222 OR4X2Q8NGF9 303 aa14.67□□□□□ -0.06
CASC4-209ENST00000559222 OR4D10Q8NGI6 311 aa14.67□□□□□ -0.06
CASC4-209ENST00000559222 TSNAXQ99598 290 aaKnown RBP14.67□□□□□ -0.06
CASC4-209ENST00000559222 RNF5Q99942 180 aa14.67□□□□□ -0.06
CASC4-209ENST00000559222 TINAGL1Q9GZM7 467 aaPredicted RBP14.67□□□□□ -0.06
CASC4-209ENST00000559222 MTFP1Q9UDX5 166 aa14.67□□□□□ -0.06
CASC4-209ENST00000559222 SPDEFO95238 335 aa14.66□□□□□ -0.06
CASC4-209ENST00000559222 CD3DP04234 171 aa14.66□□□□□ -0.06
CASC4-209ENST00000559222 IGF1P05019 195 aa14.66□□□□□ -0.06
CASC4-209ENST00000559222 GNRHRP30968 328 aa14.66□□□□□ -0.06
CASC4-209ENST00000559222 C19orf54Q5BKX5 351 aa14.66□□□□□ -0.06
CASC4-209ENST00000559222 VKORC1L1Q8N0U8 176 aa14.66□□□□□ -0.06
CASC4-209ENST00000559222 A3GALT2U3KPV4 340 aa14.66□□□□□ -0.06
CASC4-209ENST00000559222 RAMP3O60896 148 aa14.65□□□□□ -0.06
CASC4-209ENST00000559222 SLC22A5O76082 557 aa14.65□□□□□ -0.06
CASC4-209ENST00000559222 RPLP1P05386 114 aaKnown RBP14.65□□□□□ -0.06
CASC4-209ENST00000559222 IL18Q14116 193 aa14.65□□□□□ -0.06
CASC4-209ENST00000559222 ECSCRQ19T08 205 aa14.65□□□□□ -0.06
CASC4-209ENST00000559222 HSD17B10Q99714 261 aaKnown RBP14.65□□□□□ -0.06
CASC4-209ENST00000559222 SOSTQ9BQB4 213 aa14.65□□□□□ -0.06
CASC4-209ENST00000559222 DPPA5A6NC42 116 aa14.64□□□□□ -0.07
CASC4-209ENST00000559222 GABARAPH6UMI1 98 aa14.64□□□□□ -0.07
CASC4-209ENST00000559222 SOX15O60248 233 aa14.64□□□□□ -0.07
CASC4-209ENST00000559222 SAA1P0DJI8 122 aaPredicted RBP14.64□□□□□ -0.07
CASC4-209ENST00000559222 RRASP10301 218 aa14.64□□□□□ -0.07
CASC4-209ENST00000559222 VDAC1P21796 283 aa14.64□□□□□ -0.07
CASC4-209ENST00000559222 PPIFP30405 207 aaKnown RBP14.64□□□□□ -0.07
CASC4-209ENST00000559222 TAGLNQ01995 201 aaKnown RBP14.64□□□□□ -0.07
CASC4-209ENST00000559222 VAX1Q5SQQ9 334 aa14.64□□□□□ -0.07
CASC4-209ENST00000559222 FAAP20Q6NZ36 180 aa14.64□□□□□ -0.07
CASC4-209ENST00000559222 ZNF66Q6ZN08 573 aa14.64□□□□□ -0.07
CASC4-209ENST00000559222 OR51H1Q8NH63 302 aa14.64□□□□□ -0.07
CASC4-209ENST00000559222 CASTOR1Q8WTX7 329 aa14.64□□□□□ -0.07
CASC4-209ENST00000559222 SMIM4Q8WVI0 70 aa14.64□□□□□ -0.07
CASC4-209ENST00000559222 FCAMRQ8WWV6 532 aa14.64□□□□□ -0.07
CASC4-209ENST00000559222 MMP27Q9H306 513 aa14.64□□□□□ -0.07
CASC4-209ENST00000559222 TSSC4Q9Y5U2 329 aaPredicted RBP14.64□□□□□ -0.07
CASC4-209ENST00000559222 TRAV41A0A0B4J266 112 aa14.63□□□□□ -0.07
CASC4-209ENST00000559222 ZNF701M0R085 212 aaPredicted RBP14.63□□□□□ -0.07
CASC4-209ENST00000559222 TPPPO94811 219 aa14.63□□□□□ -0.07
CASC4-209ENST00000559222 LGALS7P47929 136 aa14.63□□□□□ -0.07
CASC4-209ENST00000559222 RPL23AP62750 156 aaKnown RBP14.63□□□□□ -0.07
CASC4-209ENST00000559222 GNB1P62873 340 aa14.63□□□□□ -0.07
CASC4-209ENST00000559222 SLC35B1P78383 322 aa14.63□□□□□ -0.07
CASC4-209ENST00000559222 CBX3Q13185 183 aa14.63□□□□□ -0.07
CASC4-209ENST00000559222 MSMO1Q15800 293 aa14.63□□□□□ -0.07
CASC4-209ENST00000559222 AADACL3Q5VUY0 350 aa14.63□□□□□ -0.07
CASC4-209ENST00000559222 PYHIN1Q6K0P9 492 aa14.63□□□□□ -0.07
CASC4-209ENST00000559222 PPP1R27Q86WC6 154 aa14.63□□□□□ -0.07
CASC4-209ENST00000559222 OR6F1Q8NGZ6 308 aa14.63□□□□□ -0.07
CASC4-209ENST00000559222 GRPEL2Q8TAA5 225 aa14.63□□□□□ -0.07
CASC4-209ENST00000559222 ABHD5Q8WTS1 349 aa14.63□□□□□ -0.07
CASC4-209ENST00000559222 R3HDM4Q96D70 268 aa14.63□□□□□ -0.07
CASC4-209ENST00000559222 KLK15Q9H2R5 256 aa14.63□□□□□ -0.07
CASC4-209ENST00000559222 ZNF580Q9UK33 172 aa14.63□□□□□ -0.07
CASC4-209ENST00000559222 PRELID3BQ9Y3B1 194 aa14.63□□□□□ -0.07
CASC4-209ENST00000559222 IGHG4P01861 327 aa14.62□□□□□ -0.07
CASC4-209ENST00000559222 RLN1P04808 185 aa14.62□□□□□ -0.07
CASC4-209ENST00000559222 CRIP2P52943 208 aaPredicted RBP14.62□□□□□ -0.07
CASC4-209ENST00000559222 UBE2KP61086 200 aa14.62□□□□□ -0.07
CASC4-209ENST00000559222 TSPAN5P62079 268 aa14.62□□□□□ -0.07
CASC4-209ENST00000559222 PHLDA2Q53GA4 152 aa14.62□□□□□ -0.07
CASC4-209ENST00000559222 OSR1Q8TAX0 266 aaPredicted RBP14.62□□□□□ -0.07
CASC4-209ENST00000559222 ARPC1AQ92747 370 aa14.62□□□□□ -0.07
CASC4-209ENST00000559222 V9GYH0 126 aa14.62□□□□□ -0.07
CASC4-209ENST00000559222 TNCP24821 2201 aa14.62□□□□□ -0.07
CASC4-209ENST00000559222 CTDSPLO15194 276 aa14.61□□□□□ -0.07
CASC4-209ENST00000559222 OPN1MWP04001 364 aa14.61□□□□□ -0.07
CASC4-209ENST00000559222 CD74P04233 296 aa14.61□□□□□ -0.07
CASC4-209ENST00000559222 OPN1MW2P0DN77 364 aa14.61□□□□□ -0.07
CASC4-209ENST00000559222 OPN1MW3P0DN78 364 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms