RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 SLURP1P55000 103 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 TPPP2P59282 170 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 PITPNAQ00169 270 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 CD69Q07108 199 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 PJVKQ0ZLH3 352 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 RTL8BQ17RB0 113 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 GRPEL2Q8TAA5 225 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 SLC25A38Q96DW6 304 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 ADTRPQ96IZ2 230 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 RHOVQ96L33 236 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 PRR25Q96S07 402 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 RNF167Q9H6Y7 350 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 RHBDL2Q9NX52 303 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 SSX5O60225 188 aa13.12□□□□□ -0.31
LRRC28-210ENST00000558879 BRI3O95415 125 aa13.12□□□□□ -0.31
LRRC28-210ENST00000558879 CLEC2LP0C7M8 214 aa13.12□□□□□ -0.31
LRRC28-210ENST00000558879 ECI1P42126 302 aa13.12□□□□□ -0.31
LRRC28-210ENST00000558879 CBX3Q13185 183 aa13.12□□□□□ -0.31
LRRC28-210ENST00000558879 VAX1Q5SQQ9 334 aa13.12□□□□□ -0.31
LRRC28-210ENST00000558879 ZNF645Q8N7E2 425 aa13.12□□□□□ -0.31
LRRC28-210ENST00000558879 POC5Q8NA72 575 aa13.12□□□□□ -0.31
LRRC28-210ENST00000558879 DLX4Q92988 240 aaPredicted RBP13.12□□□□□ -0.31
LRRC28-210ENST00000558879 ZNF256Q9Y2P7 627 aaPredicted RBP13.12□□□□□ -0.31
LRRC28-210ENST00000558879 RBM7Q9Y580 266 aaKnown RBP13.12□□□□□ -0.31
LRRC28-210ENST00000558879 SHOXO15266 292 aa13.11□□□□□ -0.31
LRRC28-210ENST00000558879 IGHV3-11P01762 117 aa13.11□□□□□ -0.31
LRRC28-210ENST00000558879 HLA-DQB1P01920 261 aa13.11□□□□□ -0.31
LRRC28-210ENST00000558879 CTXN2P0C2S0 81 aa13.11□□□□□ -0.31
LRRC28-210ENST00000558879 MXD1Q05195 221 aa13.11□□□□□ -0.31
LRRC28-210ENST00000558879 CNIH2Q6PI25 160 aa13.11□□□□□ -0.31
LRRC28-210ENST00000558879 ZNF429Q86V71 674 aa13.11□□□□□ -0.31
LRRC28-210ENST00000558879 OR5H6Q8NGV6 325 aa13.11□□□□□ -0.31
LRRC28-210ENST00000558879 TMEM68Q96MH6 324 aa13.11□□□□□ -0.31
LRRC28-210ENST00000558879 OR2W1Q9Y3N9 320 aa13.11□□□□□ -0.31
LRRC28-210ENST00000558879 ETV7Q9Y603 341 aa13.11□□□□□ -0.31
LRRC28-210ENST00000558879 CRYZL1O95825 349 aa13.1□□□□□ -0.31
LRRC28-210ENST00000558879 IGLV2-14P01704 120 aa13.1□□□□□ -0.31
LRRC28-210ENST00000558879 TRGV3P03979 118 aa13.1□□□□□ -0.31
LRRC28-210ENST00000558879 CD36P16671 472 aa13.1□□□□□ -0.31
LRRC28-210ENST00000558879 GNG2P59768 71 aa13.1□□□□□ -0.31
LRRC28-210ENST00000558879 UBE2KP61086 200 aa13.1□□□□□ -0.31
LRRC28-210ENST00000558879 NEDD8Q15843 81 aa13.1□□□□□ -0.31
LRRC28-210ENST00000558879 ACSM6Q6P461 480 aa13.1□□□□□ -0.31
LRRC28-210ENST00000558879 OVCH2Q7RTZ1 564 aa13.1□□□□□ -0.31
LRRC28-210ENST00000558879 TEX45Q8NA69 505 aa13.1□□□□□ -0.31
LRRC28-210ENST00000558879 OSR1Q8TAX0 266 aaPredicted RBP13.1□□□□□ -0.31
LRRC28-210ENST00000558879 MS4A10Q96PG2 267 aa13.1□□□□□ -0.31
LRRC28-210ENST00000558879 ST6GALNAC5Q9BVH7 336 aa13.1□□□□□ -0.31
LRRC28-210ENST00000558879 ANXA10Q9UJ72 324 aa13.1□□□□□ -0.31
LRRC28-210ENST00000558879 IGKV1D-13A0A0B4J2D9 117 aa13.09□□□□□ -0.31
LRRC28-210ENST00000558879 LOC100506127A0A0U1RQW1 187 aa13.09□□□□□ -0.31
LRRC28-210ENST00000558879 TUSC2O75896 110 aa13.09□□□□□ -0.31
LRRC28-210ENST00000558879 HSPB1P04792 205 aaKnown RBP13.09□□□□□ -0.31
LRRC28-210ENST00000558879 IGKV1-13P0DP09 117 aa13.09□□□□□ -0.31
LRRC28-210ENST00000558879 NFYAP23511 347 aaPredicted RBP13.09□□□□□ -0.31
LRRC28-210ENST00000558879 CD40LGP29965 261 aa13.09□□□□□ -0.31
LRRC28-210ENST00000558879 EIF4EBP1Q13541 118 aaPredicted RBP13.09□□□□□ -0.31
LRRC28-210ENST00000558879 KCTD9Q7L273 389 aa13.09□□□□□ -0.31
LRRC28-210ENST00000558879 RBMX2Q9Y388 322 aaKnown RBP13.09□□□□□ -0.31
LRRC28-210ENST00000558879 A0A0A6YYH2 397 aa13.08□□□□□ -0.32
LRRC28-210ENST00000558879 A6NJ64 397 aa13.08□□□□□ -0.32
LRRC28-210ENST00000558879 SLC22A5O76082 557 aa13.08□□□□□ -0.32
LRRC28-210ENST00000558879 CNIH1O95406 144 aa13.08□□□□□ -0.32
LRRC28-210ENST00000558879 SAA1P0DJI8 122 aaPredicted RBP13.08□□□□□ -0.32
LRRC28-210ENST00000558879 VMA21Q3ZAQ7 101 aa13.08□□□□□ -0.32
LRRC28-210ENST00000558879 TMEM127O75204 238 aa13.07□□□□□ -0.32
LRRC28-210ENST00000558879 SAP30O75446 220 aa13.07□□□□□ -0.32
LRRC28-210ENST00000558879 RPL30P62888 115 aaKnown RBP13.07□□□□□ -0.32
LRRC28-210ENST00000558879 CDK10Q15131 360 aa13.07□□□□□ -0.32
LRRC28-210ENST00000558879 PRSS8Q16651 343 aa13.07□□□□□ -0.32
LRRC28-210ENST00000558879 IDNKQ5T6J7 187 aa13.07□□□□□ -0.32
LRRC28-210ENST00000558879 IDO2Q6ZQW0 420 aa13.07□□□□□ -0.32
LRRC28-210ENST00000558879 OR5T1Q8NG75 326 aa13.07□□□□□ -0.32
LRRC28-210ENST00000558879 SRSF12Q8WXF0 261 aaKnown RBP13.07□□□□□ -0.32
LRRC28-210ENST00000558879 TINAGL1Q9GZM7 467 aaPredicted RBP13.07□□□□□ -0.32
LRRC28-210ENST00000558879 SPATA2Q9UM82 520 aa13.07□□□□□ -0.32
LRRC28-210ENST00000558879 A0A0G2JLM5 398 aa13.06□□□□□ -0.32
LRRC28-210ENST00000558879 TNXAQ16473 311 aa13.06□□□□□ -0.32
LRRC28-210ENST00000558879 ADAD2Q8NCV1 583 aaKnown RBP13.06□□□□□ -0.32
LRRC28-210ENST00000558879 BEST4Q8NFU0 473 aa13.06□□□□□ -0.32
LRRC28-210ENST00000558879 TRAV18A0A075B6X5 111 aa13.05□□□□□ -0.32
LRRC28-210ENST00000558879 J3QRK9 145 aa13.05□□□□□ -0.32
LRRC28-210ENST00000558879 FCGR3BO75015 233 aa13.05□□□□□ -0.32
LRRC28-210ENST00000558879 AADACP22760 399 aa13.05□□□□□ -0.32
LRRC28-210ENST00000558879 TGFBR1P36897 503 aa13.05□□□□□ -0.32
LRRC28-210ENST00000558879 DEFA5Q01523 94 aa13.05□□□□□ -0.32
LRRC28-210ENST00000558879 DYRK1AQ13627 763 aa13.05□□□□□ -0.32
LRRC28-210ENST00000558879 MSMO1Q15800 293 aa13.05□□□□□ -0.32
LRRC28-210ENST00000558879 TIMM50Q3ZCQ8 353 aa13.05□□□□□ -0.32
LRRC28-210ENST00000558879 HOGA1Q86XE5 327 aa13.05□□□□□ -0.32
LRRC28-210ENST00000558879 GVQW1Q8N7I0 195 aa13.05□□□□□ -0.32
LRRC28-210ENST00000558879 HSD17B10Q99714 261 aaKnown RBP13.05□□□□□ -0.32
LRRC28-210ENST00000558879 ZNF430Q9H8G1 570 aaPredicted RBP13.05□□□□□ -0.32
LRRC28-210ENST00000558879 RANGRFQ9HD47 186 aaPredicted RBP13.05□□□□□ -0.32
LRRC28-210ENST00000558879 ZNF355PQ9NSJ1 428 aa13.05□□□□□ -0.32
LRRC28-210ENST00000558879 MRPS7Q9Y2R9 242 aaKnown RBP13.05□□□□□ -0.32
LRRC28-210ENST00000558879 PRELID3BQ9Y3B1 194 aa13.05□□□□□ -0.32
LRRC28-210ENST00000558879 C13orf42A0A1B0GVH6 325 aa13.04□□□□□ -0.32
LRRC28-210ENST00000558879 CREBL2O60519 120 aaPredicted RBP13.04□□□□□ -0.32
LRRC28-210ENST00000558879 RBMXL2O75526 392 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms