RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 KRTAP4-5Q9BYR2 181 aa7.32□□□□□ -1.24
SPG11-212ENST00000558790 TUBA4BQ9H853 241 aa7.32□□□□□ -1.24
SPG11-212ENST00000558790 PLEKHA3Q9HB20 300 aa7.32□□□□□ -1.24
SPG11-212ENST00000558790 RANGRFQ9HD47 186 aaPredicted RBP7.32□□□□□ -1.24
SPG11-212ENST00000558790 PIPOXQ9P0Z9 390 aa7.32□□□□□ -1.24
SPG11-212ENST00000558790 STEAP1Q9UHE8 339 aa7.32□□□□□ -1.24
SPG11-212ENST00000558790 DNAH6Q9C0G6 4158 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 C13orf42A0A1B0GVH6 325 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 H0Y980 276 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 SLC22A1O15245 554 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 WBP4O75554 376 aaKnown RBP7.31□□□□□ -1.24
SPG11-212ENST00000558790 CIB2O75838 187 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 RBBP9O75884 186 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 TRBV12-3P01733 135 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 SLPIP03973 132 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 IGKV1-16P04430 117 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 CD40LGP29965 261 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 SSBP2P81877 361 aaPredicted RBP7.31□□□□□ -1.24
SPG11-212ENST00000558790 KLF5Q13887 457 aaPredicted RBP7.31□□□□□ -1.24
SPG11-212ENST00000558790 PSG5Q15238 335 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 LCN12Q6JVE5 192 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 ZNF562Q6V9R5 426 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 POC5Q8NA72 575 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 DRAXINQ8NBI3 349 aaPredicted RBP7.31□□□□□ -1.24
SPG11-212ENST00000558790 HIPK2Q9H2X6 1198 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 ZNF355PQ9NSJ1 428 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 BABAM2Q9NXR7 383 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 ABRACLQ9P1F3 81 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 CLEC2DQ9UHP7 191 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 CEPT1Q9Y6K0 416 aa7.31□□□□□ -1.24
SPG11-212ENST00000558790 PNMA8CA0A1B0GUJ8 204 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 LOC100130705A0A1B0GUX0 176 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 H3BUA1 57 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 SLC25A17O43808 307 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 CSN3P07498 182 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 DCKP27707 260 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 MC5RP33032 325 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 CAPGP40121 348 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 RASSF2P50749 326 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 LINC00205P59089 165 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 FXYD3Q14802 87 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 C6orf201Q7Z4U5 140 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 Q8N402 240 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 NKAIN3Q8N8D7 197 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 OR5T1Q8NG75 326 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 DERL3Q96Q80 235 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 AGMATQ9BSE5 352 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 WFDC10AQ9H1F0 79 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 KCNK15Q9H427 330 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 HEYLQ9NQ87 328 aaPredicted RBP7.3□□□□□ -1.24
SPG11-212ENST00000558790 OR1A1Q9P1Q5 309 aa7.3□□□□□ -1.24
SPG11-212ENST00000558790 FAT2Q9NYQ8 4349 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 A0A0G2JLM5 398 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 LINC00473A8K010 186 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 NAPSAO96009 420 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 IL6RP08887 468 aaPredicted RBP7.29□□□□□ -1.24
SPG11-212ENST00000558790 MYL12AP19105 171 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 CD81P60033 236 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 PJVKQ0ZLH3 352 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 MOGAT2Q3SYC2 334 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 OR10K2Q6IF99 312 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 ZNF880Q6PDB4 577 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 LINC00322Q6ZN03 302 aaPredicted RBP7.29□□□□□ -1.24
SPG11-212ENST00000558790 MOB1BQ7L9L4 216 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 CDH26Q8IXH8 852 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 ZNF383Q8NA42 475 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 ZNF485Q8NCK3 441 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 SETD6Q8TBK2 473 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 NEDD4LQ96PU5 975 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 TSNAXQ99598 290 aaKnown RBP7.29□□□□□ -1.24
SPG11-212ENST00000558790 SLC29A1Q99808 456 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 RNF5Q99942 180 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 UQCC2Q9BRT2 126 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 NICN1Q9BSH3 213 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 FAAP24Q9BTP7 215 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 C9orf16Q9BUW7 83 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 CHMP1AQ9HD42 196 aaPredicted RBP7.29□□□□□ -1.24
SPG11-212ENST00000558790 DIMT1Q9UNQ2 313 aaKnown RBP7.29□□□□□ -1.24
SPG11-212ENST00000558790 EXOSC1Q9Y3B2 195 aaKnown RBP7.29□□□□□ -1.24
SPG11-212ENST00000558790 LRRC42Q9Y546 428 aa7.29□□□□□ -1.24
SPG11-212ENST00000558790 DYNC1I1O14576 645 aa7.28□□□□□ -1.24
SPG11-212ENST00000558790 ITGB1BP1O14713 200 aa7.28□□□□□ -1.24
SPG11-212ENST00000558790 PROP1O75360 226 aa7.28□□□□□ -1.24
SPG11-212ENST00000558790 RBMXL2O75526 392 aaKnown RBP7.28□□□□□ -1.24
SPG11-212ENST00000558790 OR2A4O95047 310 aa7.28□□□□□ -1.24
SPG11-212ENST00000558790 HTR2CP28335 458 aa7.28□□□□□ -1.24
SPG11-212ENST00000558790 HLA-DRB3P79483 266 aa7.28□□□□□ -1.24
SPG11-212ENST00000558790 RNLSQ5VYX0 342 aa7.28□□□□□ -1.24
SPG11-212ENST00000558790 ZNF343Q6P1L6 599 aa7.28□□□□□ -1.24
SPG11-212ENST00000558790 PDPNQ86YL7 162 aa7.28□□□□□ -1.24
SPG11-212ENST00000558790 GATAD1Q8WUU5 269 aa7.28□□□□□ -1.24
SPG11-212ENST00000558790 DDB2Q92466 427 aa7.28□□□□□ -1.24
SPG11-212ENST00000558790 HDHD3Q9BSH5 251 aaPredicted RBP7.28□□□□□ -1.24
SPG11-212ENST00000558790 TMEM59Q9BXS4 323 aa7.28□□□□□ -1.24
SPG11-212ENST00000558790 SIGLEC8Q9NYZ4 499 aa7.28□□□□□ -1.24
SPG11-212ENST00000558790 PEF1Q9UBV8 284 aaKnown RBP7.28□□□□□ -1.24
SPG11-212ENST00000558790 DNAH2Q9P225 4427 aa7.28□□□□□ -1.24
SPG11-212ENST00000558790 UBR4Q5T4S7 5183 aa7.27□□□□□ -1.25
SPG11-212ENST00000558790 DNAH17Q9UFH2 4485 aa7.27□□□□□ -1.25
SPG11-212ENST00000558790 A0A0A6YYD4 124 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms