RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 CLDN12P56749 244 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 PITPNAQ00169 270 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 KIAA0141Q14154 515 aaPredicted RBP6.24□□□□□ -1.41
TRAF3-205ENST00000558700 ACTBL2Q562R1 376 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 UNQ5815/PRO19632Q6UWF5 114 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 PPP1R27Q86WC6 154 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 OR4A4PQ8NGN8 299 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 OR6Q1Q8NGQ2 317 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 DCUN1D4Q92564 292 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 ARHGAP5-AS1Q96IT6 56 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 MGLLQ99685 303 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 CABLES2Q9BTV7 478 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 TOLLIPQ9H0E2 274 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 OR2D2Q9H210 308 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 SLA2Q9H6Q3 261 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 ACOT13Q9NPJ3 140 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 LSM4Q9Y4Z0 139 aaKnown RBP6.24□□□□□ -1.41
TRAF3-205ENST00000558700 SMAD5-AS1Q9Y6J3 95 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 V9GY05 133 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 IGHV4OR15-8A0A075B7B6 117 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 A0A087WW49 117 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 TMEM272A0A1B0GTI8 110 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 H3BUA1 57 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 M0R1X1 148 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 PDCD5O14737 125 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 FABP7O15540 132 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 SLC25A17O43808 307 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 ACTL6BO94805 426 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 IGKV1-16P04430 117 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 FCGR3AP08637 254 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 SCTP09683 121 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 CRHBPP24387 322 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 SLURP1P55000 103 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 TPPP2P59282 170 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 FABP5Q01469 135 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 PSG5Q15238 335 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 AKIRIN2Q53H80 203 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 PLAC9Q5JTB6 97 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 HES5Q5TA89 166 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 IZUMO2Q6UXV1 221 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 ZNF562Q6V9R5 426 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 DRAXINQ8NBI3 349 aaPredicted RBP6.23□□□□□ -1.41
TRAF3-205ENST00000558700 GRPEL2Q8TAA5 225 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 FLYWCH2Q96CP2 140 aaKnown RBP6.23□□□□□ -1.41
TRAF3-205ENST00000558700 RAB3CQ96E17 227 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 CLCC1Q96S66 551 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 FAM103A1Q9BTL3 118 aaKnown RBP6.23□□□□□ -1.41
TRAF3-205ENST00000558700 ALX4Q9H161 411 aaPredicted RBP6.23□□□□□ -1.41
TRAF3-205ENST00000558700 SLC35D1Q9NTN3 355 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 RDH8Q9NYR8 311 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 RAB22AQ9UL26 194 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 GAB2Q9UQC2 676 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 NUBP2Q9Y5Y2 271 aa6.23□□□□□ -1.41
TRAF3-205ENST00000558700 IGKV1-6A0A0C4DH72 117 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 MFNGO00587 321 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 FCN1O00602 326 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 BET1O15155 118 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 LDLRAD4O15165 306 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 IGHV3-11P01762 117 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 TRGV3P03979 118 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 HIST1H1DP16402 221 aaKnown RBP6.22□□□□□ -1.41
TRAF3-205ENST00000558700 MAP2K4P45985 399 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 LGALS7P47929 136 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 TMEM50BP56557 158 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 FXYD3Q14802 87 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 ARL6IP1Q15041 203 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 RTL8BQ17RB0 113 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 C2orf76Q3KRA6 126 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 ZNF383Q8NA42 475 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 POC5Q8NA72 575 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 LFNGQ8NES3 379 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 OR10J5Q8NHC4 309 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 CASTOR1Q8WTX7 329 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 DLX4Q92988 240 aaPredicted RBP6.22□□□□□ -1.41
TRAF3-205ENST00000558700 HARBI1Q96MB7 349 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 OR4C12Q96R67 309 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 GINS4Q9BRT9 223 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 CENPOQ9BU64 300 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 NDUFB11Q9NX14 153 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 SLC45A2Q9UMX9 530 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 RBM7Q9Y580 266 aaKnown RBP6.22□□□□□ -1.41
TRAF3-205ENST00000558700 TENM3Q9P273 2699 aa6.22□□□□□ -1.41
TRAF3-205ENST00000558700 SORL1Q92673 2214 aa6.21□□□□□ -1.42
TRAF3-205ENST00000558700 TRAV1-2A0A0B4J238 106 aa6.21□□□□□ -1.42
TRAF3-205ENST00000558700 A0A0G2JLM5 398 aa6.21□□□□□ -1.42
TRAF3-205ENST00000558700 C13orf42A0A1B0GVH6 325 aa6.21□□□□□ -1.42
TRAF3-205ENST00000558700 METTL21EPA6NDL7 271 aa6.21□□□□□ -1.42
TRAF3-205ENST00000558700 IFITM5A6NNB3 132 aa6.21□□□□□ -1.42
TRAF3-205ENST00000558700 PROP1O75360 226 aa6.21□□□□□ -1.42
TRAF3-205ENST00000558700 CNIH1O95406 144 aa6.21□□□□□ -1.42
TRAF3-205ENST00000558700 HSPB1P04792 205 aaKnown RBP6.21□□□□□ -1.42
TRAF3-205ENST00000558700 RRASP10301 218 aa6.21□□□□□ -1.42
TRAF3-205ENST00000558700 EGR2P11161 476 aaPredicted RBP6.21□□□□□ -1.42
TRAF3-205ENST00000558700 GP9P14770 177 aa6.21□□□□□ -1.42
TRAF3-205ENST00000558700 RAB3BP20337 219 aa6.21□□□□□ -1.42
TRAF3-205ENST00000558700 ZP3P21754 424 aa6.21□□□□□ -1.42
TRAF3-205ENST00000558700 TALDO1P37837 337 aa6.21□□□□□ -1.42
TRAF3-205ENST00000558700 OR10A3P58181 314 aa6.21□□□□□ -1.42
TRAF3-205ENST00000558700 GABARAPL2P60520 117 aa6.21□□□□□ -1.42
TRAF3-205ENST00000558700 SSX1Q16384 188 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms