RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 ADTRPQ96IZ2 230 aa12.96□□□□□ -0.33
NEDD4-212ENST00000557845 HARBI1Q96MB7 349 aa12.96□□□□□ -0.33
NEDD4-212ENST00000557845 ANXA10Q9UJ72 324 aa12.96□□□□□ -0.33
NEDD4-212ENST00000557845 OR2W1Q9Y3N9 320 aa12.96□□□□□ -0.33
NEDD4-212ENST00000557845 A0A087WXM4 84 aa12.95□□□□□ -0.34
NEDD4-212ENST00000557845 LINC00473A8K010 186 aa12.95□□□□□ -0.34
NEDD4-212ENST00000557845 CNIH1O95406 144 aa12.95□□□□□ -0.34
NEDD4-212ENST00000557845 OR8U8P0C7N1 319 aa12.95□□□□□ -0.34
NEDD4-212ENST00000557845 CD40LGP29965 261 aa12.95□□□□□ -0.34
NEDD4-212ENST00000557845 TGFBR1P36897 503 aa12.95□□□□□ -0.34
NEDD4-212ENST00000557845 LUMP51884 338 aaPredicted RBP12.95□□□□□ -0.34
NEDD4-212ENST00000557845 SSBP2P81877 361 aaPredicted RBP12.95□□□□□ -0.34
NEDD4-212ENST00000557845 DGCR2P98153 550 aa12.95□□□□□ -0.34
NEDD4-212ENST00000557845 PJVKQ0ZLH3 352 aa12.95□□□□□ -0.34
NEDD4-212ENST00000557845 TIMM50Q3ZCQ8 353 aa12.95□□□□□ -0.34
NEDD4-212ENST00000557845 ZNF645Q8N7E2 425 aa12.95□□□□□ -0.34
NEDD4-212ENST00000557845 MS4A10Q96PG2 267 aa12.95□□□□□ -0.34
NEDD4-212ENST00000557845 ALX4Q9H161 411 aaPredicted RBP12.95□□□□□ -0.34
NEDD4-212ENST00000557845 SCOCQ9UIL1 159 aa12.95□□□□□ -0.34
NEDD4-212ENST00000557845 SPATA2Q9UM82 520 aa12.95□□□□□ -0.34
NEDD4-212ENST00000557845 A0A0A6YYH2 397 aa12.94□□□□□ -0.34
NEDD4-212ENST00000557845 A6NJ64 397 aa12.94□□□□□ -0.34
NEDD4-212ENST00000557845 SEC14L6B5MCN3 397 aa12.94□□□□□ -0.34
NEDD4-212ENST00000557845 RAMP3O60896 148 aa12.94□□□□□ -0.34
NEDD4-212ENST00000557845 TNFAIP8O95379 198 aa12.94□□□□□ -0.34
NEDD4-212ENST00000557845 GRPEL2Q8TAA5 225 aa12.94□□□□□ -0.34
NEDD4-212ENST00000557845 YIPF6Q96EC8 236 aa12.94□□□□□ -0.34
NEDD4-212ENST00000557845 SLA2Q9H6Q3 261 aa12.94□□□□□ -0.34
NEDD4-212ENST00000557845 VCX3AQ9NNX9 186 aa12.94□□□□□ -0.34
NEDD4-212ENST00000557845 DIABLOQ9NR28 239 aa12.94□□□□□ -0.34
NEDD4-212ENST00000557845 AIREO43918 545 aa12.93□□□□□ -0.34
NEDD4-212ENST00000557845 SLC22A5O76082 557 aa12.93□□□□□ -0.34
NEDD4-212ENST00000557845 IGLV2-14P01704 120 aa12.93□□□□□ -0.34
NEDD4-212ENST00000557845 RPS19P39019 145 aaKnown RBP12.93□□□□□ -0.34
NEDD4-212ENST00000557845 CROCCP3Q8IVE0 287 aa12.93□□□□□ -0.34
NEDD4-212ENST00000557845 TEX45Q8NA69 505 aa12.93□□□□□ -0.34
NEDD4-212ENST00000557845 RHOVQ96L33 236 aa12.93□□□□□ -0.34
NEDD4-212ENST00000557845 IGKV1D-13A0A0B4J2D9 117 aa12.92□□□□□ -0.34
NEDD4-212ENST00000557845 TUSC2O75896 110 aa12.92□□□□□ -0.34
NEDD4-212ENST00000557845 CRYZL1O95825 349 aa12.92□□□□□ -0.34
NEDD4-212ENST00000557845 LGALS1P09382 135 aaKnown RBP12.92□□□□□ -0.34
NEDD4-212ENST00000557845 IGKV1-13P0DP09 117 aa12.92□□□□□ -0.34
NEDD4-212ENST00000557845 TPPP2P59282 170 aa12.92□□□□□ -0.34
NEDD4-212ENST00000557845 UBE2KP61086 200 aa12.92□□□□□ -0.34
NEDD4-212ENST00000557845 LSM3P62310 102 aaKnown RBP12.92□□□□□ -0.34
NEDD4-212ENST00000557845 MRGPRG-AS1Q2M3A8 158 aa12.92□□□□□ -0.34
NEDD4-212ENST00000557845 VMA21Q3ZAQ7 101 aa12.92□□□□□ -0.34
NEDD4-212ENST00000557845 HOGA1Q86XE5 327 aa12.92□□□□□ -0.34
NEDD4-212ENST00000557845 GVQW1Q8N7I0 195 aa12.92□□□□□ -0.34
NEDD4-212ENST00000557845 BEST4Q8NFU0 473 aa12.92□□□□□ -0.34
NEDD4-212ENST00000557845 OR5T1Q8NG75 326 aa12.92□□□□□ -0.34
NEDD4-212ENST00000557845 OSR1Q8TAX0 266 aaPredicted RBP12.92□□□□□ -0.34
NEDD4-212ENST00000557845 DCUN1D4Q92564 292 aa12.92□□□□□ -0.34
NEDD4-212ENST00000557845 TMEM68Q96MH6 324 aa12.92□□□□□ -0.34
NEDD4-212ENST00000557845 AUNIPQ9H7T9 357 aa12.92□□□□□ -0.34
NEDD4-212ENST00000557845 ZNF355PQ9NSJ1 428 aa12.92□□□□□ -0.34
NEDD4-212ENST00000557845 RBMX2Q9Y388 322 aaKnown RBP12.92□□□□□ -0.34
NEDD4-212ENST00000557845 LINC01619G3V211 115 aa12.91□□□□□ -0.34
NEDD4-212ENST00000557845 IGHV3-11P01762 117 aa12.91□□□□□ -0.34
NEDD4-212ENST00000557845 TRGV3P03979 118 aa12.91□□□□□ -0.34
NEDD4-212ENST00000557845 RPL30P62888 115 aaKnown RBP12.91□□□□□ -0.34
NEDD4-212ENST00000557845 DLX4Q92988 240 aaPredicted RBP12.91□□□□□ -0.34
NEDD4-212ENST00000557845 DCUN1D5Q9BTE7 237 aa12.91□□□□□ -0.34
NEDD4-212ENST00000557845 PRELID3BQ9Y3B1 194 aa12.91□□□□□ -0.34
NEDD4-212ENST00000557845 IGHV4OR15-8A0A075B7B6 117 aa12.9□□□□□ -0.34
NEDD4-212ENST00000557845 A0A087WW49 117 aa12.9□□□□□ -0.34
NEDD4-212ENST00000557845 H3BUA1 57 aa12.9□□□□□ -0.34
NEDD4-212ENST00000557845 OVOL1O14753 267 aa12.9□□□□□ -0.34
NEDD4-212ENST00000557845 FCGR3BO75015 233 aa12.9□□□□□ -0.34
NEDD4-212ENST00000557845 HSPB1P04792 205 aaKnown RBP12.9□□□□□ -0.34
NEDD4-212ENST00000557845 PTHLHP12272 177 aa12.9□□□□□ -0.34
NEDD4-212ENST00000557845 ECI1P42126 302 aa12.9□□□□□ -0.34
NEDD4-212ENST00000557845 INSL3P51460 131 aa12.9□□□□□ -0.34
NEDD4-212ENST00000557845 SLURP1P55000 103 aa12.9□□□□□ -0.34
NEDD4-212ENST00000557845 ARPC4P59998 168 aa12.9□□□□□ -0.34
NEDD4-212ENST00000557845 PRSS8Q16651 343 aa12.9□□□□□ -0.34
NEDD4-212ENST00000557845 IDO2Q6ZQW0 420 aa12.9□□□□□ -0.34
NEDD4-212ENST00000557845 KCTD9Q7L273 389 aa12.9□□□□□ -0.34
NEDD4-212ENST00000557845 POC5Q8NA72 575 aa12.9□□□□□ -0.34
NEDD4-212ENST00000557845 S100A16Q96FQ6 103 aaKnown RBP12.9□□□□□ -0.34
NEDD4-212ENST00000557845 MSGN1A6NI15 193 aa12.89□□□□□ -0.35
NEDD4-212ENST00000557845 TRIM64CA6NLI5 447 aa12.89□□□□□ -0.35
NEDD4-212ENST00000557845 XRCC3O43542 346 aa12.89□□□□□ -0.35
NEDD4-212ENST00000557845 FCGR2CP31995 323 aa12.89□□□□□ -0.35
NEDD4-212ENST00000557845 CBX5P45973 191 aa12.89□□□□□ -0.35
NEDD4-212ENST00000557845 EIF4EBP1Q13541 118 aaPredicted RBP12.89□□□□□ -0.35
NEDD4-212ENST00000557845 TNXAQ16473 311 aa12.89□□□□□ -0.35
NEDD4-212ENST00000557845 OVCH2Q7RTZ1 564 aa12.89□□□□□ -0.35
NEDD4-212ENST00000557845 MFSD4AQ8N468 514 aa12.89□□□□□ -0.35
NEDD4-212ENST00000557845 PHB2Q99623 299 aa12.89□□□□□ -0.35
NEDD4-212ENST00000557845 HSD17B10Q99714 261 aaKnown RBP12.89□□□□□ -0.35
NEDD4-212ENST00000557845 MRPS7Q9Y2R9 242 aaKnown RBP12.89□□□□□ -0.35
NEDD4-212ENST00000557845 A0A0G2JLM5 398 aa12.88□□□□□ -0.35
NEDD4-212ENST00000557845 BRI3O95415 125 aa12.88□□□□□ -0.35
NEDD4-212ENST00000557845 FCER2P06734 321 aa12.88□□□□□ -0.35
NEDD4-212ENST00000557845 AADACP22760 399 aa12.88□□□□□ -0.35
NEDD4-212ENST00000557845 CDK10Q15131 360 aa12.88□□□□□ -0.35
NEDD4-212ENST00000557845 OR2B11Q5JQS5 317 aa12.88□□□□□ -0.35
NEDD4-212ENST00000557845 UBE2NLQ5JXB2 153 aa12.88□□□□□ -0.35
NEDD4-212ENST00000557845 ZNF429Q86V71 674 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms