RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 MYH3P11055 1940 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 SYNMO15061 1565 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 NLRC5Q86WI3 1866 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 FHAD1B1AJZ9 1412 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 MYH2Q9UKX2 1941 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 DOCK6Q96HP0 2047 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 TRAV26-2A0A0B4J265 109 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 IGKV1-12A0A0C4DH73 117 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 COX7A2LO14548 114 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 IGKV1D-12P01611 117 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 TRGV3P03979 118 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 SERPINE1P05121 402 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 PFN1P07737 140 aaKnown RBP2.43□□□□□ -2.02
TDP1-217ENST00000557782 CYBAP13498 195 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 ZNF32P17041 273 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 MDKP21741 143 aaPredicted RBP2.43□□□□□ -2.02
TDP1-217ENST00000557782 NPY1RP25929 384 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 RAB4BP61018 213 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 TNFAIP6P98066 277 aaPredicted RBP2.43□□□□□ -2.02
TDP1-217ENST00000557782 FUT5Q11128 374 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 GRK1Q15835 563 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 C2orf83Q53S99 150 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 GLT8D1Q68CQ7 371 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 ZFP2Q6ZN57 461 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 TMPPEQ6ZT21 453 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 STX19Q8N4C7 294 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 SMIM20Q8N5G0 67 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 OR10A6Q8NH74 314 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 RAB2BQ8WUD1 216 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 GINS3Q9BRX5 216 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 KRTAP1-5Q9BYS1 174 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 RNASE7Q9H1E1 156 aaKnown RBP2.43□□□□□ -2.02
TDP1-217ENST00000557782 VCXQ9H320 206 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 UQCC1Q9NVA1 299 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 TAAR3PQ9P1P4 343 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 COQ4Q9Y3A0 265 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 DHX57Q6P158 1386 aaKnown RBP2.43□□□□□ -2.02
TDP1-217ENST00000557782 CEP170Q5SW79 1584 aa2.43□□□□□ -2.02
TDP1-217ENST00000557782 COL27A1Q8IZC6 1860 aaPredicted RBP2.43□□□□□ -2.02
TDP1-217ENST00000557782 NUP155O75694 1391 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 A0A1B0GW54 56 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 VPS37CA5D8V6 355 aaPredicted RBP2.42□□□□□ -2.02
TDP1-217ENST00000557782 A6NED7 52 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 ZNF729A6NN14 1252 aaPredicted RBP2.42□□□□□ -2.02
TDP1-217ENST00000557782 OR11H12B2RN74 326 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 PIRO00625 290 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 S1PR2O95136 353 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 IFNA14P01570 189 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 IGLV7-43P04211 117 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 CGB3P0DN86 165 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 CGB7P0DN87 165 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 IDO1P14902 403 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 APOFQ13790 326 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 AKR1C8PQ5T2L2 129 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 TBPL2Q6SJ96 375 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 GOLT1AQ6ZVE7 132 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 GRINAQ7Z429 371 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 APCDD1LQ8NCL9 501 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 OR11H1Q8NG94 326 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 OR11H2Q8NH07 326 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 ACOT12Q8WYK0 555 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 HIST1H2BAQ96A08 127 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 NMNAT3Q96T66 252 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 CCDC90BQ9GZT6 254 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 TUBGCP6Q96RT7 1819 aa2.42□□□□□ -2.02
TDP1-217ENST00000557782 MYO10Q9HD67 2058 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 NACADO15069 1562 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 SCN4AP35499 1836 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 TRBV24-1A0A075B6N3 115 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 hCG_1818297A0A087WSY0 165 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 C7orf66A4D0T2 115 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 A8MT66 165 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 A8MWP4 228 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 G3V2T6 193 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 TSTD3H0UI37 97 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 GPR31O00270 319 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 HMGB3O15347 200 aaKnown RBP2.41□□□□□ -2.02
TDP1-217ENST00000557782 SH2D1AO60880 128 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 GAS8-AS1O95177 125 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 CRHP06850 196 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 CRABP2P29373 138 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 ERP29P30040 261 aaKnown RBP2.41□□□□□ -2.02
TDP1-217ENST00000557782 GABRA4P48169 554 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 ZNF140P52738 457 aaPredicted RBP2.41□□□□□ -2.02
TDP1-217ENST00000557782 RPS20P60866 119 aaKnown RBP2.41□□□□□ -2.02
TDP1-217ENST00000557782 C10orf91Q5T1B1 145 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 AMTNQ6UX39 209 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 Q6ZS49 121 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 PHF13Q86YI8 300 aaPredicted RBP2.41□□□□□ -2.02
TDP1-217ENST00000557782 ZNF664Q8N3J9 261 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 C3orf22Q8N5N4 141 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 BPIFB6Q8NFQ5 453 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 OR4K13Q8NH42 304 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 KLK6Q92876 244 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 TSPAN32Q96QS1 320 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 GPER1Q99527 375 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 MIXL1Q9H2W2 232 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 PRR34Q9NV39 138 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 CELA1Q9UNI1 258 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 OR51B4Q9Y5P0 310 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms