RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 CT45A7P0DMV0 189 aa13.1□□□□□ -0.31
NEK9-211ENST00000557673 ETV6P41212 452 aa13.1□□□□□ -0.31
NEK9-211ENST00000557673 C10orf99Q6UWK7 81 aa13.1□□□□□ -0.31
NEK9-211ENST00000557673 C5orf56Q8N8D9 126 aa13.1□□□□□ -0.31
NEK9-211ENST00000557673 GIMAP1Q8WWP7 306 aa13.1□□□□□ -0.31
NEK9-211ENST00000557673 FXYD6Q9H0Q3 95 aa13.1□□□□□ -0.31
NEK9-211ENST00000557673 H0YJW9 148 aa13.09□□□□□ -0.31
NEK9-211ENST00000557673 J3QRK9 145 aa13.09□□□□□ -0.31
NEK9-211ENST00000557673 M0QYG6 137 aa13.09□□□□□ -0.31
NEK9-211ENST00000557673 IGLV2-14P01704 120 aa13.09□□□□□ -0.31
NEK9-211ENST00000557673 PTBP1P26599 531 aaKnown RBP eCLIP13.09□□□□□ -0.31
NEK9-211ENST00000557673 HERV-K104P61576 105 aa13.09□□□□□ -0.31
NEK9-211ENST00000557673 SPANXN2Q5MJ10 180 aa13.09□□□□□ -0.31
NEK9-211ENST00000557673 GLDNQ6ZMI3 551 aaPredicted RBP13.09□□□□□ -0.31
NEK9-211ENST00000557673 OR5AN1Q8NGI8 311 aa13.09□□□□□ -0.31
NEK9-211ENST00000557673 OR2T10Q8NGZ9 312 aa13.09□□□□□ -0.31
NEK9-211ENST00000557673 TRIM63Q969Q1 353 aa13.09□□□□□ -0.31
NEK9-211ENST00000557673 MOB3AQ96BX8 217 aa13.09□□□□□ -0.31
NEK9-211ENST00000557673 RBMXL1Q96E39 390 aaKnown RBP13.09□□□□□ -0.31
NEK9-211ENST00000557673 EAF1Q96JC9 268 aaPredicted RBP13.09□□□□□ -0.31
NEK9-211ENST00000557673 SLC22A5O76082 557 aa13.08□□□□□ -0.32
NEK9-211ENST00000557673 MOSP00540 346 aa13.08□□□□□ -0.32
NEK9-211ENST00000557673 CD74P04233 296 aa13.08□□□□□ -0.32
NEK9-211ENST00000557673 CD3DP04234 171 aa13.08□□□□□ -0.32
NEK9-211ENST00000557673 THBS3P49746 956 aa13.08□□□□□ -0.32
NEK9-211ENST00000557673 TAS2R19P59542 299 aa13.08□□□□□ -0.32
NEK9-211ENST00000557673 FXYD4P59646 89 aa13.08□□□□□ -0.32
NEK9-211ENST00000557673 MSMO1Q15800 293 aa13.08□□□□□ -0.32
NEK9-211ENST00000557673 RNASE10Q5GAN6 216 aaKnown RBP13.08□□□□□ -0.32
NEK9-211ENST00000557673 DHRS11Q6UWP2 260 aa13.08□□□□□ -0.32
NEK9-211ENST00000557673 TMEM17Q86X19 198 aa13.08□□□□□ -0.32
NEK9-211ENST00000557673 ZNF383Q8NA42 475 aa13.08□□□□□ -0.32
NEK9-211ENST00000557673 TMEM229BQ8NBD8 167 aa13.08□□□□□ -0.32
NEK9-211ENST00000557673 DRAXINQ8NBI3 349 aaPredicted RBP13.08□□□□□ -0.32
NEK9-211ENST00000557673 CHPT1Q8WUD6 406 aa13.08□□□□□ -0.32
NEK9-211ENST00000557673 SECTM1Q8WVN6 248 aa13.08□□□□□ -0.32
NEK9-211ENST00000557673 ZNF2Q9BSG1 426 aaPredicted RBP13.08□□□□□ -0.32
NEK9-211ENST00000557673 TINAGL1Q9GZM7 467 aaPredicted RBP13.08□□□□□ -0.32
NEK9-211ENST00000557673 ZFP57Q9NU63 452 aa13.08□□□□□ -0.32
NEK9-211ENST00000557673 PTTG2Q9NZH5 202 aa13.08□□□□□ -0.32
NEK9-211ENST00000557673 MYCNOSP40205 109 aa13.07□□□□□ -0.32
NEK9-211ENST00000557673 LINC00205P59089 165 aa13.07□□□□□ -0.32
NEK9-211ENST00000557673 RPL23AP62750 156 aaKnown RBP13.07□□□□□ -0.32
NEK9-211ENST00000557673 PYDC2Q56P42 97 aa13.07□□□□□ -0.32
NEK9-211ENST00000557673 OR4D10Q8NGI6 311 aa13.07□□□□□ -0.32
NEK9-211ENST00000557673 SRRQ9GZT4 340 aa13.07□□□□□ -0.32
NEK9-211ENST00000557673 SLC5A7Q9GZV3 580 aa13.07□□□□□ -0.32
NEK9-211ENST00000557673 WASHC3Q9Y3C0 194 aa13.07□□□□□ -0.32
NEK9-211ENST00000557673 NUDT19A8MXV4 375 aa13.06□□□□□ -0.32
NEK9-211ENST00000557673 FGF16O43320 207 aa13.06□□□□□ -0.32
NEK9-211ENST00000557673 RAMP3O60896 148 aa13.06□□□□□ -0.32
NEK9-211ENST00000557673 APOA2P02652 100 aa13.06□□□□□ -0.32
NEK9-211ENST00000557673 DUTP33316 252 aaKnown RBP13.06□□□□□ -0.32
NEK9-211ENST00000557673 SLC35B1P78383 322 aa13.06□□□□□ -0.32
NEK9-211ENST00000557673 EIF4EBP1Q13541 118 aaPredicted RBP13.06□□□□□ -0.32
NEK9-211ENST00000557673 STEAP1BQ6NZ63 245 aa13.06□□□□□ -0.32
NEK9-211ENST00000557673 ETV3LQ6ZN32 361 aa13.06□□□□□ -0.32
NEK9-211ENST00000557673 Q8N402 240 aa13.06□□□□□ -0.32
NEK9-211ENST00000557673 ARRDC1Q8N5I2 433 aa13.06□□□□□ -0.32
NEK9-211ENST00000557673 COMMD1Q8N668 190 aa13.06□□□□□ -0.32
NEK9-211ENST00000557673 OR6F1Q8NGZ6 308 aa13.06□□□□□ -0.32
NEK9-211ENST00000557673 DDB2Q92466 427 aa13.06□□□□□ -0.32
NEK9-211ENST00000557673 ADTRPQ96IZ2 230 aa13.06□□□□□ -0.32
NEK9-211ENST00000557673 NOL4LQ96MY1 436 aaPredicted RBP13.06□□□□□ -0.32
NEK9-211ENST00000557673 TAS2R8Q9NYW2 309 aa13.06□□□□□ -0.32
NEK9-211ENST00000557673 ANKRD20A5PA0PJZ0 165 aa13.05□□□□□ -0.32
NEK9-211ENST00000557673 NCBP2LA6PVI3 153 aaKnown RBP13.05□□□□□ -0.32
NEK9-211ENST00000557673 LINC00473A8K010 186 aa13.05□□□□□ -0.32
NEK9-211ENST00000557673 RAB3DO95716 219 aa13.05□□□□□ -0.32
NEK9-211ENST00000557673 MC5RP33032 325 aa13.05□□□□□ -0.32
NEK9-211ENST00000557673 TSPAN5P62079 268 aa13.05□□□□□ -0.32
NEK9-211ENST00000557673 KCTD9Q7L273 389 aa13.05□□□□□ -0.32
NEK9-211ENST00000557673 ZNF329Q86UD4 541 aa13.05□□□□□ -0.32
NEK9-211ENST00000557673 PDPNQ86YL7 162 aa13.05□□□□□ -0.32
NEK9-211ENST00000557673 OR8H1Q8NGG4 311 aa13.05□□□□□ -0.32
NEK9-211ENST00000557673 OR4C16Q8NGL9 310 aa13.05□□□□□ -0.32
NEK9-211ENST00000557673 CCL28Q9NRJ3 127 aa13.05□□□□□ -0.32
NEK9-211ENST00000557673 SLC35D1Q9NTN3 355 aa13.05□□□□□ -0.32
NEK9-211ENST00000557673 LINC00527Q9UJ94 153 aa13.05□□□□□ -0.32
NEK9-211ENST00000557673 U3KQK5 164 aa13.05□□□□□ -0.32
NEK9-211ENST00000557673 H7C2Y5 167 aa13.04□□□□□ -0.32
NEK9-211ENST00000557673 IGKV1-16P04430 117 aa13.04□□□□□ -0.32
NEK9-211ENST00000557673 IFNA6P05013 189 aa13.04□□□□□ -0.32
NEK9-211ENST00000557673 AKAIN1P0CW23 69 aa13.04□□□□□ -0.32
NEK9-211ENST00000557673 MEF2DQ14814 521 aa13.04□□□□□ -0.32
NEK9-211ENST00000557673 MMDQ15546 238 aa13.04□□□□□ -0.32
NEK9-211ENST00000557673 AADACL3Q5VUY0 350 aa13.04□□□□□ -0.32
NEK9-211ENST00000557673 FAAP20Q6NZ36 180 aa13.04□□□□□ -0.32
NEK9-211ENST00000557673 ZNF818PQ6ZRF7 136 aa13.04□□□□□ -0.32
NEK9-211ENST00000557673 LINC00299Q6ZSB3 139 aa13.04□□□□□ -0.32
NEK9-211ENST00000557673 SLC35E3Q7Z769 313 aa13.04□□□□□ -0.32
NEK9-211ENST00000557673 LHFPL1Q86WI0 220 aa13.04□□□□□ -0.32
NEK9-211ENST00000557673 MFSD4AQ8N468 514 aa13.04□□□□□ -0.32
NEK9-211ENST00000557673 FAM71E2Q8N5Q1 922 aa13.04□□□□□ -0.32
NEK9-211ENST00000557673 HSD17B10Q99714 261 aaKnown RBP13.04□□□□□ -0.32
NEK9-211ENST00000557673 THAP7Q9BT49 309 aaPredicted RBP13.04□□□□□ -0.32
NEK9-211ENST00000557673 PLSCR3Q9NRY6 295 aa13.04□□□□□ -0.32
NEK9-211ENST00000557673 DNAH9Q9NYC9 4486 aa13.03□□□□□ -0.32
NEK9-211ENST00000557673 LINC01548A6NM66 108 aa13.03□□□□□ -0.32
NEK9-211ENST00000557673 CNTFRP26992 372 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 495.5 ms