RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 EGFEM1PQ0D2K5 195 aa12.85□□□□□ -0.35
VSX1-207ENST00000557285 TIMM50Q3ZCQ8 353 aa12.85□□□□□ -0.35
VSX1-207ENST00000557285 IDO2Q6ZQW0 420 aa12.85□□□□□ -0.35
VSX1-207ENST00000557285 DCUN1D5Q9BTE7 237 aa12.85□□□□□ -0.35
VSX1-207ENST00000557285 DCSTAMPQ9H295 470 aa12.85□□□□□ -0.35
VSX1-207ENST00000557285 IGKV1D-13A0A0B4J2D9 117 aa12.84□□□□□ -0.35
VSX1-207ENST00000557285 MEIS3P1A6NDR6 274 aa12.84□□□□□ -0.35
VSX1-207ENST00000557285 SRRM4A7MD48 611 aaKnown RBP12.84□□□□□ -0.35
VSX1-207ENST00000557285 LINC00473A8K010 186 aa12.84□□□□□ -0.35
VSX1-207ENST00000557285 OR8U8P0C7N1 319 aa12.84□□□□□ -0.35
VSX1-207ENST00000557285 APELAP0DMC3 54 aa12.84□□□□□ -0.35
VSX1-207ENST00000557285 IGKV1-13P0DP09 117 aa12.84□□□□□ -0.35
VSX1-207ENST00000557285 DUTP33316 252 aaKnown RBP12.84□□□□□ -0.35
VSX1-207ENST00000557285 LGALS7P47929 136 aa12.84□□□□□ -0.35
VSX1-207ENST00000557285 FHL3Q13643 280 aa12.84□□□□□ -0.35
VSX1-207ENST00000557285 ASPHD1Q5U4P2 390 aa12.84□□□□□ -0.35
VSX1-207ENST00000557285 CNIH2Q6PI25 160 aa12.84□□□□□ -0.35
VSX1-207ENST00000557285 GVQW1Q8N7I0 195 aa12.84□□□□□ -0.35
VSX1-207ENST00000557285 TCTEX1D1Q8N7M0 179 aa12.84□□□□□ -0.35
VSX1-207ENST00000557285 OR5T1Q8NG75 326 aa12.84□□□□□ -0.35
VSX1-207ENST00000557285 YIPF6Q96EC8 236 aa12.84□□□□□ -0.35
VSX1-207ENST00000557285 ADTRPQ96IZ2 230 aa12.84□□□□□ -0.35
VSX1-207ENST00000557285 ANXA10Q9UJ72 324 aa12.84□□□□□ -0.35
VSX1-207ENST00000557285 OR2W1Q9Y3N9 320 aa12.84□□□□□ -0.35
VSX1-207ENST00000557285 FCGR3BO75015 233 aa12.83□□□□□ -0.36
VSX1-207ENST00000557285 TRGV3P03979 118 aa12.83□□□□□ -0.36
VSX1-207ENST00000557285 CTXN2P0C2S0 81 aa12.83□□□□□ -0.36
VSX1-207ENST00000557285 RRASP10301 218 aa12.83□□□□□ -0.36
VSX1-207ENST00000557285 CD40LGP29965 261 aa12.83□□□□□ -0.36
VSX1-207ENST00000557285 ECI1P42126 302 aa12.83□□□□□ -0.36
VSX1-207ENST00000557285 SLURP1P55000 103 aa12.83□□□□□ -0.36
VSX1-207ENST00000557285 DGCR2P98153 550 aa12.83□□□□□ -0.36
VSX1-207ENST00000557285 TAGLNQ01995 201 aaKnown RBP12.83□□□□□ -0.36
VSX1-207ENST00000557285 AKIRIN2Q53H80 203 aa12.83□□□□□ -0.36
VSX1-207ENST00000557285 C9orf66Q5T8R8 295 aa12.83□□□□□ -0.36
VSX1-207ENST00000557285 KCTD9Q7L273 389 aa12.83□□□□□ -0.36
VSX1-207ENST00000557285 ZNF645Q8N7E2 425 aa12.83□□□□□ -0.36
VSX1-207ENST00000557285 BEST4Q8NFU0 473 aa12.83□□□□□ -0.36
VSX1-207ENST00000557285 PHB2Q99623 299 aa12.83□□□□□ -0.36
VSX1-207ENST00000557285 DIABLOQ9NR28 239 aa12.83□□□□□ -0.36
VSX1-207ENST00000557285 RPS19P39019 145 aaKnown RBP12.82□□□□□ -0.36
VSX1-207ENST00000557285 SCAND1P57086 179 aa12.82□□□□□ -0.36
VSX1-207ENST00000557285 SSBP2P81877 361 aaPredicted RBP12.82□□□□□ -0.36
VSX1-207ENST00000557285 DEFA5Q01523 94 aa12.82□□□□□ -0.36
VSX1-207ENST00000557285 VMA21Q3ZAQ7 101 aa12.82□□□□□ -0.36
VSX1-207ENST00000557285 TMEM177Q53S58 311 aa12.82□□□□□ -0.36
VSX1-207ENST00000557285 PYHIN1Q6K0P9 492 aa12.82□□□□□ -0.36
VSX1-207ENST00000557285 DDB2Q92466 427 aa12.82□□□□□ -0.36
VSX1-207ENST00000557285 DCUN1D4Q92564 292 aa12.82□□□□□ -0.36
VSX1-207ENST00000557285 PRR25Q96S07 402 aa12.82□□□□□ -0.36
VSX1-207ENST00000557285 GPHA2Q96T91 129 aa12.82□□□□□ -0.36
VSX1-207ENST00000557285 SPATA2Q9UM82 520 aa12.82□□□□□ -0.36
VSX1-207ENST00000557285 RBMX2Q9Y388 322 aaKnown RBP12.82□□□□□ -0.36
VSX1-207ENST00000557285 IGHV4OR15-8A0A075B7B6 117 aa12.81□□□□□ -0.36
VSX1-207ENST00000557285 A0A087WW49 117 aa12.81□□□□□ -0.36
VSX1-207ENST00000557285 HLA-DQB1P01920 261 aa12.81□□□□□ -0.36
VSX1-207ENST00000557285 CRYGBP07316 175 aa12.81□□□□□ -0.36
VSX1-207ENST00000557285 LGALS1P09382 135 aaKnown RBP12.81□□□□□ -0.36
VSX1-207ENST00000557285 RPL30P62888 115 aaKnown RBP12.81□□□□□ -0.36
VSX1-207ENST00000557285 RUNX1Q01196 453 aa12.81□□□□□ -0.36
VSX1-207ENST00000557285 TNXAQ16473 311 aa12.81□□□□□ -0.36
VSX1-207ENST00000557285 SECTM1Q8WVN6 248 aa12.81□□□□□ -0.36
VSX1-207ENST00000557285 TCTEX1D2Q8WW35 142 aa12.81□□□□□ -0.36
VSX1-207ENST00000557285 ACOT12Q8WYK0 555 aa12.81□□□□□ -0.36
VSX1-207ENST00000557285 AUNIPQ9H7T9 357 aa12.81□□□□□ -0.36
VSX1-207ENST00000557285 TAS2R8Q9NYW2 309 aa12.81□□□□□ -0.36
VSX1-207ENST00000557285 LINC01619G3V211 115 aa12.8□□□□□ -0.36
VSX1-207ENST00000557285 TNFSF12O43508 249 aa12.8□□□□□ -0.36
VSX1-207ENST00000557285 LY86O95711 162 aa12.8□□□□□ -0.36
VSX1-207ENST00000557285 AADACP22760 399 aa12.8□□□□□ -0.36
VSX1-207ENST00000557285 FCGR2CP31995 323 aa12.8□□□□□ -0.36
VSX1-207ENST00000557285 FXYD4P59646 89 aa12.8□□□□□ -0.36
VSX1-207ENST00000557285 HOGA1Q86XE5 327 aa12.8□□□□□ -0.36
VSX1-207ENST00000557285 VKORC1L1Q8N0U8 176 aa12.8□□□□□ -0.36
VSX1-207ENST00000557285 SAMD12Q8N8I0 201 aa12.8□□□□□ -0.36
VSX1-207ENST00000557285 POC5Q8NA72 575 aa12.8□□□□□ -0.36
VSX1-207ENST00000557285 DLX4Q92988 240 aaPredicted RBP12.8□□□□□ -0.36
VSX1-207ENST00000557285 IFT46Q9NQC8 304 aa12.8□□□□□ -0.36
VSX1-207ENST00000557285 COA4Q9NYJ1 87 aa12.8□□□□□ -0.36
VSX1-207ENST00000557285 PRELID3BQ9Y3B1 194 aa12.8□□□□□ -0.36
VSX1-207ENST00000557285 A0A0A6YYH2 397 aa12.79□□□□□ -0.36
VSX1-207ENST00000557285 C13orf42A0A1B0GVH6 325 aa12.79□□□□□ -0.36
VSX1-207ENST00000557285 ANKRD34BA5PLL1 514 aa12.79□□□□□ -0.36
VSX1-207ENST00000557285 MSGN1A6NI15 193 aa12.79□□□□□ -0.36
VSX1-207ENST00000557285 A6NJ64 397 aa12.79□□□□□ -0.36
VSX1-207ENST00000557285 OVOL1O14753 267 aa12.79□□□□□ -0.36
VSX1-207ENST00000557285 MPPED1O15442 326 aa12.79□□□□□ -0.36
VSX1-207ENST00000557285 IGLV2-14P01704 120 aa12.79□□□□□ -0.36
VSX1-207ENST00000557285 SAA1P0DJI8 122 aaPredicted RBP12.79□□□□□ -0.36
VSX1-207ENST00000557285 UBE2KP61086 200 aa12.79□□□□□ -0.36
VSX1-207ENST00000557285 NCS1P62166 190 aa12.79□□□□□ -0.36
VSX1-207ENST00000557285 PRSS8Q16651 343 aa12.79□□□□□ -0.36
VSX1-207ENST00000557285 UBE2NLQ5JXB2 153 aa12.79□□□□□ -0.36
VSX1-207ENST00000557285 CROCCP3Q8IVE0 287 aa12.79□□□□□ -0.36
VSX1-207ENST00000557285 TEX45Q8NA69 505 aa12.79□□□□□ -0.36
VSX1-207ENST00000557285 OR13F1Q8NGS4 319 aa12.79□□□□□ -0.36
VSX1-207ENST00000557285 OSR1Q8TAX0 266 aaPredicted RBP12.79□□□□□ -0.36
VSX1-207ENST00000557285 S100A16Q96FQ6 103 aaKnown RBP12.79□□□□□ -0.36
VSX1-207ENST00000557285 FUNDC2Q9BWH2 189 aa12.79□□□□□ -0.36
VSX1-207ENST00000557285 SLA2Q9H6Q3 261 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms