RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 PPIAL4EA0A075B759 164 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 IGHV3OR15-7A0A075B7D8 119 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 TRGV10A0A0A0MS01 117 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 BORCS7-ASMTA0A0B4J1R7 106 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 KBTBD11-OT1A0A1B0GTJ5 212 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 hADV38S2A0JD32 116 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 NKX2-6A6NCS4 301 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 E7EQL1 145 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 PPIAL4DF5H284 164 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 C15orf65H3BRN8 121 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 ITGB1BP1O14713 200 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 TNFSF12O43508 249 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 YPEL1O60688 119 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 FSTL3O95633 263 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 GAPDHP04406 335 aaKnown RBP3.67□□□□□ -1.82
SRP54-212ENST00000556992 PPIAL4FP0DN26 164 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 CGB3P0DN86 165 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 CGB7P0DN87 165 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 RRASP10301 218 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 EGR1P18146 543 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 PPIFP30405 207 aaKnown RBP3.67□□□□□ -1.82
SRP54-212ENST00000556992 LPAR6P43657 344 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 NKX2-1P43699 371 aaPredicted RBP3.67□□□□□ -1.82
SRP54-212ENST00000556992 CEBPDP49716 269 aaPredicted RBP3.67□□□□□ -1.82
SRP54-212ENST00000556992 VAMP2P63027 116 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 CCL8P80075 99 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 MEF2CQ06413 473 aaPredicted RBP3.67□□□□□ -1.82
SRP54-212ENST00000556992 CATR1Q13166 79 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 NMSQ5H8A3 153 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 ALKAL2Q6UX46 152 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 C5orf24Q7Z6I8 188 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 FAM219AQ8IW50 185 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 FOXRED2Q8IWF2 684 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 DRAM1Q8N682 238 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 ZNF645Q8N7E2 425 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 DEFB108BQ8NET1 73 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 OR10A7Q8NGE5 316 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 OR52L2PQ8NGH6 319 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 OR52M1Q8NGK5 317 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 OR4D5Q8NGN0 318 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 OR13A1Q8NGR1 328 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 OR51H1Q8NH63 302 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 RFESDQ8TAC1 157 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 C14orf79Q96F83 325 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 YPEL2Q96QA6 119 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 PRR25Q96S07 402 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 RAB40CQ96S21 281 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 HSD17B10Q99714 261 aaKnown RBP3.67□□□□□ -1.82
SRP54-212ENST00000556992 LINC00574Q9H8X3 128 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 DYNLRB1Q9NP97 96 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 CYTL1Q9NRR1 136 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 LIN7CQ9NUP9 197 aaKnown RBP3.67□□□□□ -1.82
SRP54-212ENST00000556992 CISD1Q9NZ45 108 aaKnown RBP3.67□□□□□ -1.82
SRP54-212ENST00000556992 OR5AC2Q9NZP5 309 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 GNG12Q9UBI6 72 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 CLN8Q9UBY8 286 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 JPT1Q9UK76 154 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 RNF150Q9ULK6 438 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 KCNS2Q9ULS6 477 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 LAMP3Q9UQV4 416 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 RNF115Q9Y4L5 304 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 LSM5Q9Y4Y9 91 aaKnown RBP3.67□□□□□ -1.82
SRP54-212ENST00000556992 PPIAL4AQ9Y536 164 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 AUP1Q9Y679 476 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 POMT1Q9Y6A1 747 aa3.67□□□□□ -1.82
SRP54-212ENST00000556992 AKAP9Q99996 3911 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 NKX6-3A6NJ46 265 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 ZNF729A6NN14 1252 aaPredicted RBP3.66□□□□□ -1.82
SRP54-212ENST00000556992 LEUTXA8MZ59 168 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 SHISA9B4DS77 424 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 FAM90A26D6RGX4 464 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 TMEM178BH3BS89 294 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 WRBO00258 174 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 SIGLEC5O15389 551 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 ADAM20O43506 726 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 NDUFB3O43676 98 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 CHST1O43916 411 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 PITX3O75364 302 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 MED6O75586 246 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 CLDN1O95832 211 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 SCGB1D2O95969 90 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 CYB5R3P00387 301 aaPredicted RBP3.66□□□□□ -1.82
SRP54-212ENST00000556992 PRB1P04280 392 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 NMBP08949 121 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 AGAP20933 346 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 CD80P33681 288 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 PPP1CCP36873 323 aaKnown RBP3.66□□□□□ -1.82
SRP54-212ENST00000556992 KIR2DS2P43631 304 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 GPR12P47775 334 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 RAB7AP51149 207 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 ARHGDIBP52566 201 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 EDDM3BP56851 147 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 TMEM33P57088 247 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 TAS2R30P59541 319 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 RPL23AP62750 156 aaKnown RBP3.66□□□□□ -1.82
SRP54-212ENST00000556992 SNTB1Q13884 538 aaKnown RBP3.66□□□□□ -1.82
SRP54-212ENST00000556992 EDDM3AQ14507 147 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 HFEQ30201 348 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 MORN2Q502X0 79 aa3.66□□□□□ -1.82
SRP54-212ENST00000556992 ZNF585BQ52M93 769 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms